Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1KEE
DownloadVisualize
BU of 1kee by Molmil
Inactivation of the Amidotransferase Activity of Carbamoyl Phosphate Synthetase by the Antibiotic Acivicin
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, Carbamoyl-phosphate synthetase large chain, ...
Authors:Miles, B.W, Thoden, J.B, Holden, H.M, Raushel, F.M.
Deposit date:2001-11-15
Release date:2001-12-21
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Inactivation of the amidotransferase activity of carbamoyl phosphate synthetase by the antibiotic acivicin.
J.Biol.Chem., 277, 2002
6S6Y
DownloadVisualize
BU of 6s6y by Molmil
X-ray crystal structure of the formyltransferase/hydrolase complex (FhcABCD) from Methylorubrum extorquens in complex with methylofuran
Descriptor: (2~{S})-3-[4-[[5-(aminomethyl)furan-3-yl]methoxy]phenyl]-2-(methylamino)propanoic acid, 1,2-ETHANEDIOL, AMINO GROUP, ...
Authors:Wagner, T, Hemmann, J.L, Shima, S, Vorholt, J.
Deposit date:2019-07-04
Release date:2019-12-04
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Methylofuran is a prosthetic group of the formyltransferase/hydrolase complex and shuttles one-carbon units between two active sites.
Proc.Natl.Acad.Sci.USA, 116, 2019
1C30
DownloadVisualize
BU of 1c30 by Molmil
CRYSTAL STRUCTURE OF CARBAMOYL PHOSPHATE SYNTHETASE: SMALL SUBUNIT MUTATION C269S
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CARBAMOYL PHOSPHATE SYNTHETASE: LARGE SUBUNIT, CARBAMOYL PHOSPHATE SYNTHETASE: SMALL SUBUNIT, ...
Authors:Thoden, J.B, Huang, X, Raushel, F.M, Holden, H.M.
Deposit date:1999-07-24
Release date:1999-12-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:The small subunit of carbamoyl phosphate synthetase: snapshots along the reaction pathway.
Biochemistry, 38, 1999
3SC8
DownloadVisualize
BU of 3sc8 by Molmil
Crystal structure of an intramolecular human telomeric DNA G-quadruplex bound by the naphthalene diimide BMSG-SH-3
Descriptor: 2,7-bis[3-(4-methylpiperazin-1-yl)propyl]-4,9-bis{[3-(4-methylpiperazin-1-yl)propyl]amino}benzo[lmn][3,8]phenanthroline-1,3,6,8(2H,7H)-tetrone, Human telomeric repeat sequence, POTASSIUM ION
Authors:Collie, G.W, Promontorio, R, Parkinson, G.N.
Deposit date:2011-06-07
Release date:2012-02-15
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.302 Å)
Cite:Structural basis for telomeric g-quadruplex targeting by naphthalene diimide ligands.
J.Am.Chem.Soc., 134, 2012
1CS0
DownloadVisualize
BU of 1cs0 by Molmil
Crystal structure of carbamoyl phosphate synthetase complexed at CYS269 in the small subunit with the tetrahedral mimic l-glutamate gamma-semialdehyde
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CARBAMOYL PHOSPHATE SYNTHETASE: LARGE SUBUNIT, CARBAMOYL PHOSPHATE SYNTHETASE: SMALL SUBUNIT, ...
Authors:Thoden, J.B, Huang, X, Raushel, F.M, Holden, H.M.
Deposit date:1999-08-16
Release date:1999-12-10
Last modified:2019-11-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:The small subunit of carbamoyl phosphate synthetase: snapshots along the reaction pathway.
Biochemistry, 38, 1999
5TCF
DownloadVisualize
BU of 5tcf by Molmil
Crystal structure of tryptophan synthase from M. tuberculosis - ligand-free form
Descriptor: FORMIC ACID, MALONATE ION, POTASSIUM ION, ...
Authors:Michalska, K, Maltseva, N, Jedrzejczak, R, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2016-09-15
Release date:2017-05-31
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:A small-molecule allosteric inhibitor of Mycobacterium tuberculosis tryptophan synthase.
Nat. Chem. Biol., 13, 2017
3VD8
DownloadVisualize
BU of 3vd8 by Molmil
Crystal structure of human AIM2 PYD domain with MBP fusion
Descriptor: 1,2-ETHANEDIOL, Maltose-binding periplasmic protein, Interferon-inducible protein AIM2, ...
Authors:Jin, T.C, Perry, A, Smith, P, Xiao, T.S.
Deposit date:2012-01-04
Release date:2013-01-16
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.0685 Å)
Cite:Structure of the Absent in Melanoma 2 (AIM2) Pyrin Domain Provides Insights into the Mechanisms of AIM2 Autoinhibition and Inflammasome Assembly.
J.Biol.Chem., 288, 2013
3UYH
DownloadVisualize
BU of 3uyh by Molmil
Crystal structure of an intramolecular human telomeric DNA G-quadruplex bound by the naphthalene diimide compound, MM41
Descriptor: 4,9-bis{[3-(4-methylpiperazin-1-yl)propyl]amino}-2,7-bis[3-(morpholin-4-yl)propyl]benzo[lmn][3,8]phenanthroline-1,3,6,8(2H,7H)-tetrone, POTASSIUM ION, human telomeric DNA sequence
Authors:Collie, G.W, Neidle, S.
Deposit date:2011-12-06
Release date:2013-01-02
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure-based design and evaluation of naphthalene diimide g-quadruplex ligands as telomere targeting agents in pancreatic cancer cells.
J.Med.Chem., 56, 2013
3SKQ
DownloadVisualize
BU of 3skq by Molmil
Mdm38 is a 14-3-3-like receptor and associates with the protein synthesis machinery at the inner mitochondrial membrane
Descriptor: IODIDE ION, Mitochondrial distribution and morphology protein 38, POTASSIUM ION
Authors:Lupo, D, Tews, I, Sinning, I.
Deposit date:2011-06-23
Release date:2011-07-27
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Mdm38 is a 14-3-3-Like Receptor and Associates with the Protein Synthesis Machinery at the Inner Mitochondrial Membrane.
Traffic, 12, 2011
3S83
DownloadVisualize
BU of 3s83 by Molmil
EAL domain of phosphodiesterase PdeA
Descriptor: GGDEF family protein, POTASSIUM ION
Authors:Filippova, E.V, Minasov, G, Shuvalova, L, Kiryukhina, O, Massa, C, Schirmer, T, Joachimiak, A, Anderson, W.F, Midwest Center for Structural Genomics (MCSG)
Deposit date:2011-05-27
Release date:2011-06-29
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Crystal structure of EAL domain from Caulobacter crescentus CB15
To be Published
3T5E
DownloadVisualize
BU of 3t5e by Molmil
Crystal structure of an intramolecular human telomeric DNA G-quadruplex bound by the naphthalene diimide BMSG-SH-4
Descriptor: 2,7-bis[4-(4-methylpiperazin-1-yl)butyl]-4,9-bis{[4-(4-methylpiperazin-1-yl)butyl]amino}benzo[lmn][3,8]phenanthroline-1 ,3,6,8(2H,7H)-tetrone, POTASSIUM ION, human telomeric DNA sequence
Authors:Collie, G.W, Promontorio, R, Parkinson, G.N.
Deposit date:2011-07-27
Release date:2012-02-15
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for telomeric g-quadruplex targeting by naphthalene diimide ligands.
J.Am.Chem.Soc., 134, 2012
3W7A
DownloadVisualize
BU of 3w7a by Molmil
Crystal Structure of azoreductase AzrC fin complex with sulfone-modified azo dye Acid Red 88
Descriptor: 4-[(E)-(2-hydroxynaphthalen-1-yl)diazenyl]naphthalene-1-sulfonic acid, CALCIUM ION, FLAVIN MONONUCLEOTIDE, ...
Authors:Yu, J, Ogata, D, Ooi, T, Yao, M.
Deposit date:2013-02-27
Release date:2014-02-12
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structures of AzrA and of AzrC complexed with substrate or inhibitor: insight into substrate specificity and catalytic mechanism.
Acta Crystallogr.,Sect.D, 70, 2014
2LNY
DownloadVisualize
BU of 2lny by Molmil
ShB peptide structure bound to negatively charged lipid-bilayer after Molecular Dynamics refinement
Descriptor: ShB peptide
Authors:Weingarth, M.
Deposit date:2012-01-06
Release date:2012-08-08
Last modified:2024-05-15
Method:SOLID-STATE NMR
Cite:Supramolecular structure of membrane-associated polypeptides by combining solid-state NMR and molecular dynamics simulations.
Biophys.J., 103, 2012
6U6C
DownloadVisualize
BU of 6u6c by Molmil
Crystal structure of tryptophan synthase from M. tuberculosis - aminoacrylate- and GSK2-bound form
Descriptor: 1,2-ETHANEDIOL, 1-(2-fluorobenzene-1-carbonyl)-N-methyl-2,3-dihydro-1H-indole-5-sulfonamide, 2-[({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)AMINO]ACRYLIC ACID, ...
Authors:Chang, C, Michalska, K, Maltseva, N.I, Jedrzejczak, R, McCarren, P, Nag, P.P, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2019-08-29
Release date:2020-09-02
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.402 Å)
Cite:Allosteric inhibitors of Mycobacterium tuberculosis tryptophan synthase.
Protein Sci., 29, 2020
6USA
DownloadVisualize
BU of 6usa by Molmil
Crystal structure of tryptophan synthase from M. tuberculosis - aminoacrylate- and GSK1-bound form
Descriptor: (3R,4R)-4-[4-(2-Chlorophenyl)piperazin-1-yl]-1,1-dioxothiolan-3-ol, 1,2-ETHANEDIOL, 2-[({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)AMINO]ACRYLIC ACID, ...
Authors:Chang, C, Michalska, K, Maltseva, N.I, Jedrzejczak, R, McCarren, P, Nag, P.P, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2019-10-25
Release date:2020-09-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.406 Å)
Cite:Allosteric inhibitors of Mycobacterium tuberculosis tryptophan synthase.
Protein Sci., 29, 2020
3VEZ
DownloadVisualize
BU of 3vez by Molmil
Crystal structure of the O-carbamoyltransferase TobZ K443A variant in complex with ATP, ADP and carbamoyl phosphate
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, FE (II) ION, ...
Authors:Parthier, C, Stubbs, M.T, Goerlich, S, Jaenecke, F.
Deposit date:2012-01-09
Release date:2012-01-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The O-Carbamoyltransferase TobZ Catalyzes an Ancient Enzymatic Reaction.
Angew.Chem.Int.Ed.Engl., 51, 2012
3VF4
DownloadVisualize
BU of 3vf4 by Molmil
Crystal structure of the O-carbamoyltransferase TobZ S530A variant in complex with carbamoyl phosphate and ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, FE (II) ION, O-carbamoyltransferase TobZ, ...
Authors:Parthier, C, Stubbs, M.T, Goerlich, S, Jaenecke, F.
Deposit date:2012-01-09
Release date:2012-01-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The O-Carbamoyltransferase TobZ Catalyzes an Ancient Enzymatic Reaction.
Angew.Chem.Int.Ed.Engl., 51, 2012
3VES
DownloadVisualize
BU of 3ves by Molmil
Crystal structure of the O-carbamoyltransferase TobZ in complex with AMPCPP and carbamoyl phosphate
Descriptor: 1,2-ETHANEDIOL, DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, FE (II) ION, ...
Authors:Parthier, C, Stubbs, M.T, Goerlich, S, Jaenecke, F.
Deposit date:2012-01-09
Release date:2012-01-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:The O-Carbamoyltransferase TobZ Catalyzes an Ancient Enzymatic Reaction.
Angew.Chem.Int.Ed.Engl., 51, 2012
3VET
DownloadVisualize
BU of 3vet by Molmil
Crystal structure of the O-carbamoyltransferase TobZ in complex with Tobramycin, carbamoyl phosphate and ADP
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, FE (II) ION, ...
Authors:Parthier, C, Stubbs, M.T, Goerlich, S, Jaenecke, F.
Deposit date:2012-01-09
Release date:2012-01-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The O-Carbamoyltransferase TobZ Catalyzes an Ancient Enzymatic Reaction.
Angew.Chem.Int.Ed.Engl., 51, 2012
3VEN
DownloadVisualize
BU of 3ven by Molmil
Crystal structure of the O-carbamoyltransferase TobZ
Descriptor: FE (II) ION, GLYCEROL, L(+)-TARTARIC ACID, ...
Authors:Parthier, C, Stubbs, M.T, Goerlich, S, Jaenecke, F.
Deposit date:2012-01-09
Release date:2012-01-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:The O-Carbamoyltransferase TobZ Catalyzes an Ancient Enzymatic Reaction.
Angew.Chem.Int.Ed.Engl., 51, 2012
3VEO
DownloadVisualize
BU of 3veo by Molmil
Crystal structure of the O-carbamoyltransferase TobZ in complex with carbamoyl phosphate
Descriptor: 1,2-ETHANEDIOL, FE (II) ION, O-carbamoyltransferase TobZ, ...
Authors:Parthier, C, Stubbs, M.T, Goerlich, S, Jaenecke, F.
Deposit date:2012-01-09
Release date:2012-01-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.187 Å)
Cite:The O-Carbamoyltransferase TobZ Catalyzes an Ancient Enzymatic Reaction.
Angew.Chem.Int.Ed.Engl., 51, 2012
3VF2
DownloadVisualize
BU of 3vf2 by Molmil
Crystal structure of the O-carbamoyltransferase TobZ M473I variant in complex with carbamoyl phosphate and ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, FE (II) ION, O-carbamoyltransferase TobZ, ...
Authors:Parthier, C, Stubbs, M.T, Goerlich, S, Jaenecke, F.
Deposit date:2012-01-09
Release date:2012-01-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The O-Carbamoyltransferase TobZ Catalyzes an Ancient Enzymatic Reaction.
Angew.Chem.Int.Ed.Engl., 51, 2012
8JXO
DownloadVisualize
BU of 8jxo by Molmil
Cryo-EM structure of BlCHR2 class one
Descriptor: BlCHR2, POTASSIUM ION, RETINAL
Authors:Zhang, M.F.
Deposit date:2023-07-01
Release date:2024-07-10
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structure of BlCHR2 class one
To Be Published
8JXP
DownloadVisualize
BU of 8jxp by Molmil
Cryo-EM structure of BlCHR2 class one
Descriptor: BlCHR2, POTASSIUM ION, RETINAL
Authors:Zhang, M.F.
Deposit date:2023-07-01
Release date:2024-07-10
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structure of BlCHR2 class one
To Be Published
6C1M
DownloadVisualize
BU of 6c1m by Molmil
NavAb NormoPP mutant
Descriptor: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1-METHYLGUANIDINE, CHAPSO, ...
Authors:Catterall, W.A, Zheng, N, Jiang, D, Gamal El-Din, T.M.
Deposit date:2018-01-04
Release date:2018-05-16
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.518 Å)
Cite:Structural basis for gating pore current in periodic paralysis.
Nature, 557, 2018

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon