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6EKC
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BU of 6ekc by Molmil
Crystal structure of the BSD2 homolog of Arabidopsis thaliana bound to the octameric assembly of RbcL from Thermosynechococcus elongatus
Descriptor: DnaJ/Hsp40 cysteine-rich domain superfamily protein, Ribulose bisphosphate carboxylase large chain, ZINC ION
Authors:Aigner, H, Wilson, R.H, Bracher, A, Calisse, L, Bhat, J.Y, Hartl, F.U, Hayer-Hartl, M.
Deposit date:2017-09-26
Release date:2017-12-06
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.63 Å)
Cite:Plant RuBisCo assembly in E. coli with five chloroplast chaperones including BSD2.
Science, 358, 2017
8AH8
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BU of 8ah8 by Molmil
Crystal Structure of the third PDZ domain of PSD-95 protein in the space group P3121 at pH 3.7
Descriptor: cDNA FLJ50577, highly similar to Discs large homolog 4
Authors:Camara-Artigas, A, Salinas Garcia, M.C.
Deposit date:2022-07-20
Release date:2023-03-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:pH-Driven Polymorphic Behaviour of the Third PDZ Domain of PSD95: The Role of Electrostatic Interactions
Crystals, 2023
2RRB
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BU of 2rrb by Molmil
Refinement of RNA binding domain in human Tra2 beta protein
Descriptor: cDNA FLJ40872 fis, clone TUTER2000283, highly similar to Homo sapiens transformer-2-beta (SFRS10) gene
Authors:Tsuda, K, Kuwasako, K, Takahashi, M, Someya, T, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Sugano, S, Muto, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2010-06-17
Release date:2011-04-27
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural basis for the dual RNA-recognition modes of human Tra2-beta RRM.
Nucleic Acids Res., 39, 2011
1TJL
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BU of 1tjl by Molmil
Crystal structure of transcription factor DksA from E. coli
Descriptor: DnaK suppressor protein, ZINC ION
Authors:Perederina, A, Svetlov, V, Vassylyeva, M.N, Artsimovitch, I, Yokoyama, S, Vassylyev, D.G, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-06-06
Release date:2004-09-07
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Regulation through the secondary channel--structural framework for ppGpp-DksA synergism during transcription
Cell(Cambridge,Mass.), 118, 2004
6ZTJ
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BU of 6ztj by Molmil
E. coli 70S-RNAP expressome complex in NusG-coupled state (38 nt intervening mRNA)
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S1, ...
Authors:Webster, M.W, Takacs, M, Weixlbaumer, A.
Deposit date:2020-07-20
Release date:2020-09-16
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural basis of transcription-translation coupling and collision in bacteria.
Science, 369, 2020
6ZTL
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BU of 6ztl by Molmil
E. coli 70S-RNAP expressome complex in collided state bound to NusG
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Webster, M.W, Takacs, M, Weixlbaumer, A.
Deposit date:2020-07-20
Release date:2020-09-16
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural basis of transcription-translation coupling and collision in bacteria.
Science, 369, 2020
6ZTO
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BU of 6zto by Molmil
E. coli 70S-RNAP expressome complex in uncoupled state 1
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Webster, M.W, Takacs, M, Weixlbaumer, A.
Deposit date:2020-07-20
Release date:2020-09-23
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural basis of transcription-translation coupling and collision in bacteria.
Science, 369, 2020
6ZU1
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BU of 6zu1 by Molmil
E. coli 70S-RNAP expressome complex in uncoupled state 2
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Webster, M.W, Takacs, M, Weixlbaumer, A.
Deposit date:2020-07-21
Release date:2020-09-16
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural basis of transcription-translation coupling and collision in bacteria.
Science, 369, 2020
8JCH
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BU of 8jch by Molmil
Cryo-EM structure of yeast Rat1-bound Pol II pre-termination transcription complex 1 (Pol II Rat1-PTTC1)
Descriptor: 5'-3' exoribonuclease 2, DNA (38-MER), DNA-directed RNA polymerase II subunit RPB1, ...
Authors:Zeng, Y, Zhang, Y.
Deposit date:2023-05-11
Release date:2024-01-31
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structural basis of exoribonuclease-mediated mRNA transcription termination.
Nature, 628, 2024
5WMF
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BU of 5wmf by Molmil
Crystal structure of the Hexameric Ring of Epstein-Barr Virus Nuclear Antigen-1, EBNA1
Descriptor: Epstein-Barr nuclear antigen 1
Authors:Messick, T.E.
Deposit date:2017-07-28
Release date:2017-08-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural and Functional Basis for an EBNA1 Hexameric Ring in Epstein-Barr Virus Episome Maintenance.
J. Virol., 91, 2017
6O9M
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BU of 6o9m by Molmil
Structure of the human apo TFIIH
Descriptor: CDK-activating kinase assembly factor MAT1, General transcription factor IIH subunit 1, General transcription factor IIH subunit 2, ...
Authors:Yan, C.L, Dodd, T, He, Y, Tainer, J.A, Tsutakawa, S.E, Ivanov, I.
Deposit date:2019-03-14
Release date:2019-05-29
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Transcription preinitiation complex structure and dynamics provide insight into genetic diseases.
Nat.Struct.Mol.Biol., 26, 2019
4V14
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BU of 4v14 by Molmil
Structure and function analysis of MutT from the psychrofile fish pathogen Aliivibrio salmonicida and the mesophile Vibrio cholerae
Descriptor: MUTATOR MUTT PROTEIN
Authors:Lian, K, Leiros, H.-K.S, Moe, E.
Deposit date:2014-09-24
Release date:2015-02-04
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Mutt from the Fish Pathogen Aliivibrio Salmonicida is a Cold-Active Nucleotide-Pool Sanitization Enzyme with Unexpectedly High Thermostability.
FEBS Open Bio, 5, 2015
3SZP
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BU of 3szp by Molmil
Full-length structure of the Vibrio cholerae virulence activator, AphB, a member of the LTTR protein family
Descriptor: Transcriptional regulator, LysR family
Authors:Taylor, J.L, De Silva, R.S, Kovacikova, G, Lin, W, Taylor, R.K, Skorupski, K, Kull, F.J.
Deposit date:2011-07-19
Release date:2011-11-23
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.202 Å)
Cite:The crystal structure of AphB, a virulence gene activator from Vibrio cholerae, reveals residues that influence its response to oxygen and pH.
Mol.Microbiol., 83, 2012
2R1J
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BU of 2r1j by Molmil
Crystal Structure of the P22 c2 Repressor protein in complex with the synthetic operator 9T
Descriptor: 5'-D(*DCP*DAP*DTP*DTP*DTP*DAP*DAP*DGP*DAP*DTP*DAP*DTP*DCP*DTP*DTP*DAP*DAP*DAP*DTP*DA)-3', 5'-D(*DTP*DAP*DTP*DTP*DTP*DAP*DAP*DGP*DAP*DTP*DAP*DTP*DCP*DTP*DTP*DAP*DAP*DAP*DTP*DG)-3', Repressor protein C2
Authors:Williams, L.D, Koudelka, G.B, Watkins, D, Hsiao, C, Woods, K.
Deposit date:2007-08-22
Release date:2008-04-29
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:P22 c2 repressor-operator complex: mechanisms of direct and indirect readout
Biochemistry, 47, 2008
3T1B
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BU of 3t1b by Molmil
Crystal structure of the full-length AphB N100E variant
Descriptor: Transcriptional regulator, LysR family
Authors:Taylor, J.L, De Silva, R.S, Kovacikova, G, Lin, W, Taylor, R.K, Skorupski, K, Kull, F.J.
Deposit date:2011-07-21
Release date:2011-11-23
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The crystal structure of AphB, a virulence gene activator from Vibrio cholerae, reveals residues that influence its response to oxygen and pH.
Mol.Microbiol., 83, 2012
1W60
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BU of 1w60 by Molmil
NATIVE HUMAN PCNA
Descriptor: PROLIFERATING CELL NUCLEAR ANTIGEN
Authors:Kontopidis, G, Wu, S, Zheleva, D, Taylor, P, Mcinnes, C, Lane, D, Fischer, P, Walkinshaw, M.
Deposit date:2004-08-11
Release date:2005-01-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Structural and Biochemical Studies of Human Proliferating Cell Nuclear Antigen Complexes Provide a Rationale for Cyclin Association and Inhibitor Design
Proc.Natl.Acad.Sci.USA, 102, 2005
5LOE
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BU of 5loe by Molmil
Structure of full length Cody from Bacillus subtilis in complex with Ile
Descriptor: GTP-sensing transcriptional pleiotropic repressor CodY, ISOLEUCINE
Authors:Wilkinson, A.J, Levdikov, V.M, Blagova, E.V.
Deposit date:2016-08-09
Release date:2017-01-11
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of the Branched-chain Amino Acid and GTP-sensing Global Regulator, CodY, from Bacillus subtilis.
J. Biol. Chem., 292, 2017
5LOJ
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BU of 5loj by Molmil
Structure of full length unliganded CodY from Bacillus subtilis
Descriptor: GTP-sensing transcriptional pleiotropic repressor CodY
Authors:Wilkinson, A.J, Levdikov, V.M, Blagova, E.V.
Deposit date:2016-08-09
Release date:2017-01-11
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.71 Å)
Cite:Structure of the Branched-chain Amino Acid and GTP-sensing Global Regulator, CodY, from Bacillus subtilis.
J. Biol. Chem., 292, 2017
5LNH
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BU of 5lnh by Molmil
Structure of full length Unliganded CodY from Bacillus subtilis
Descriptor: GTP-sensing transcriptional pleiotropic repressor CodY, SULFATE ION
Authors:Wilkinson, A.J, Levdikov, V.M, Blagova, E.V.
Deposit date:2016-08-04
Release date:2017-01-11
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of the Branched-chain Amino Acid and GTP-sensing Global Regulator, CodY, from Bacillus subtilis.
J. Biol. Chem., 292, 2017
8JHO
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BU of 8jho by Molmil
Cryo-EM structure of the histone deacetylase complex Rpd3S in complex with di-nucleosome
Descriptor: Chromatin modification-related protein EAF3, Di-nucleosome template foward, Di-nucleosome template reverse, ...
Authors:Wang, H.
Deposit date:2023-05-25
Release date:2023-09-27
Last modified:2023-12-27
Method:ELECTRON MICROSCOPY (7.6 Å)
Cite:Structure of histone deacetylase complex Rpd3S bound to nucleosome.
Nat.Struct.Mol.Biol., 30, 2023
4E1R
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BU of 4e1r by Molmil
Crystal structure of the dimerization domain of Lsr2 from Mycobacterium tuberculosis in the P 31 2 1 space group
Descriptor: Protein lsr2
Authors:Summers, E.L, Meindl, K, Uson, I, Arcus, V.L.
Deposit date:2012-03-06
Release date:2012-06-20
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.041 Å)
Cite:The structure of the oligomerization domain of Lsr2 from Mycobacterium tuberculosis reveals a mechanism for chromosome organization and protection.
Plos One, 7, 2012
4WYV
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BU of 4wyv by Molmil
Crystal Structure of Human Translin in Open Conformation
Descriptor: Translin
Authors:Dvir, H, Eliahoo, E, Alian, A.
Deposit date:2014-11-18
Release date:2014-11-26
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3 Å)
Cite:A novel open-barrel structure of octameric translin reveals a potential RNA entryway.
J.Mol.Biol., 427, 2015
1MD0
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BU of 1md0 by Molmil
CRYSTAL STRUCTURE OF AN INHIBITED FRAGMENT OF Ets-1
Descriptor: C-ets-1 protein
Authors:Garvie, C.W, Pufall, M.A, Graves, B.J, Wolberger, C.
Deposit date:2002-08-06
Release date:2002-12-11
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Analysis of the Autoinhibition of Ets-1 and Its Role in Protein Partnerships
J.Biol.Chem., 277, 2002
1MJM
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BU of 1mjm by Molmil
METHIONINE APOREPRESSOR MUTANT (Q44K) COMPLEXED TO HALF OF THE CONSENSUS OPERATOR SEQUENCE
Descriptor: HALF CONSENSUS DNA OPERATOR DUPLEX, METHIONINE REPRESSOR
Authors:Garvie, C.W, Phillips, S.E.V.
Deposit date:1998-01-30
Release date:1999-08-02
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Direct and indirect readout in mutant Met repressor-operator complexes.
Structure Fold.Des., 8, 2000
1MJO
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BU of 1mjo by Molmil
METHIONINE HOLOREPRESSOR MUTANT (Q44K) PLUS COREPRESSOR (S-ADENOSYL METHIONINE) COMPLEXED TO THE MINIMAL MET CONSENSUS OPERATOR WITH THE CENTRAL TA STEP MUTATED TO AT
Descriptor: CALCIUM ION, CONSENSUS DNA OPERATOR DUPLEX WITH THE CENTRAL TA STEP MUTATED TO AT, METHIONINE REPRESSOR, ...
Authors:Garvie, C.W, Phillips, S.E.V.
Deposit date:1998-01-28
Release date:1999-08-02
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Direct and indirect readout in mutant Met repressor-operator complexes.
Structure Fold.Des., 8, 2000

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