PDB: 72960 resultsInfo pagesStatus searchChemie searchBIRD

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8S0M	Crystal structure of the HKU1 receptor binding domain in complex with TMPRSS2 and the nanobody A01 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Nanobody A01, ... Authors: Duquerroy, S, Fernandez, I, Rey, F. Deposit date: 2024-02-14 Release date: 2024-06-26 Method: X-RAY DIFFRACTION (3.55 Å) Cite: Structural insights into TMPRSS2 maturation and HKU1 binding To Be Published
8S0L	Crystal structure of the TMPRSS2 zymogen in complex with the nanobody A07 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Nanobody A07, ... Authors: Duquerroy, S, Fernandez, I, Rey, F. Deposit date: 2024-02-14 Release date: 2024-06-26 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Structural insights into TMPRSS2 maturation and HKU1 binding To Be Published
8S0N	Crystal structure of the TMPRSS2 zymogen in complex with the nanobody A07 Descriptor: Transmembrane protease serine 2, nanobody A07 Authors: Duquerroy, S, Fernandez, I, Rey, F. Deposit date: 2024-02-14 Release date: 2024-06-26 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Structural insights into TMPRSS2 maturation and HKU1 binding To Be Published
2RBI	STRUCTURE OF BINASE MUTANT HIS 101 ASN Descriptor: RIBONUCLEASE Authors: Offen, W.A, Okorokov, A.L. Deposit date: 1996-11-12 Release date: 1997-03-12 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (2.2 Å) Cite: RNA cleavage without hydrolysis. Splitting the catalytic activities of binase with Asn101 and Thr101 mutations. Protein Eng., 10, 1997
2E5S	Solution structure of the zf-CCCHx2 domain of muscleblind-like 2, isoform 1 [Homo sapiens] Descriptor: OTTHUMP00000018578, ZINC ION Authors: Dang, W, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) Deposit date: 2006-12-22 Release date: 2007-06-26 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: Solution structure of the RNA binding domain in the human muscleblind-like protein 2 Protein Sci., 18, 2009
3J1O	Cryo-EM map of a yeast minimal preinitiation complex interacting with the Mediator Head module Descriptor: Mediator of RNA polymerase II transcription subunit 11, Mediator of RNA polymerase II transcription subunit 17, Mediator of RNA polymerase II transcription subunit 18, ... Authors: Asturias, F.J, Imasaki, T. Deposit date: 2012-03-29 Release date: 2013-03-06 Last modified: 2024-02-21 Method: ELECTRON MICROSCOPY (16 Å) Cite: Interaction of the mediator head module with RNA polymerase II. Structure, 20, 2012
5T3W	Marburg virus VP30 bound to nucleoprotein Descriptor: Fusion protein of Nucleoprotein and Minor nucleoprotein VP30 Authors: Kirchdoerfer, R.K, Moyer, C.L, Abelson, D.M, Saphire, E.O. Deposit date: 2016-08-26 Release date: 2016-09-28 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (3.25 Å) Cite: The Ebola Virus VP30-NP Interaction Is a Regulator of Viral RNA Synthesis. Plos Pathog., 12, 2016
1XV6	The solution structure of 2',5'-linked 3'-O-(2-methoxyethyl)-RNA hairpin Descriptor: 5'-R(*(C2L)P*(G2L)P*(C2L)P*(G2L)P*(A2L)P*(A2L)P*(U2L)P*(U2L)P*(C2L)P*(G2L)P*(C2L)P*(G2L))-2' Authors: Plevnik, M, Gdaniec, Z, Plavec, J. Deposit date: 2004-10-27 Release date: 2005-04-05 Last modified: 2024-05-29 Method: SOLUTION NMR Cite: Solution structure of a modified 2',5'-linked RNA hairpin involved in an equilibrium with duplex Nucleic Acids Res., 33, 2005
2E7E	Bent-binding of cyanide to the heme iron in rat heme oxygenase-1 Descriptor: CYANIDE ION, Heme oxygenase 1, PROTOPORPHYRIN IX CONTAINING FE Authors: Sugishima, M, Fukuyama, K. Deposit date: 2007-01-09 Release date: 2007-06-19 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Alternative cyanide-binding modes to the haem iron in haem oxygenase Acta Crystallogr.,Sect.F, 63, 2007
3KWR	Crystal structure of Putative RNA-binding protein (NP_785364.1) from LACTOBACILLUS PLANTARUM at 1.45 A resolution Descriptor: GLYCEROL, Putative RNA-binding protein, SULFATE ION Authors: Joint Center for Structural Genomics (JCSG) Deposit date: 2009-12-01 Release date: 2009-12-22 Last modified: 2023-02-01 Method: X-RAY DIFFRACTION (1.45 Å) Cite: Crystal structure of Putative RNA-binding protein (NP_785364.1) from Lactobacillus plantarum at 1.45 A resolution To be published
4FSJ	Crystal structure of the virus like particle of Flock House virus Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, CHLORIDE ION, ... Authors: Speir, J.A, Chen, Z, Reddy, V.S, Johnson, J.E. Deposit date: 2012-06-27 Release date: 2012-08-01 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (3.5 Å) Cite: Structural study of virus assembly intermediates reveals maturation event sequence and a staging position for externalized lytic peptides to be published, 2012
4G8K	Intact sensor domain of human RNase L in the inactive signaling state Descriptor: 2-5A-dependent ribonuclease Authors: Han, Y, Whitney, G, Donovan, J, Korennykh, A. Deposit date: 2012-07-23 Release date: 2012-10-31 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Innate Immune Messenger 2-5A Tethers Human RNase L into Active High-Order Complexes. Cell Rep, 2, 2012
4G8L	Active state of intact sensor domain of human RNase L with 2-5A bound Descriptor: 2-5A-dependent ribonuclease, 5'-O-MONOPHOSPHORYLADENYLYL(2'->5')ADENYLYL(2'->5')ADENOSINE Authors: Han, Y, Whitney, G, Donovan, J, Korennykh, A. Deposit date: 2012-07-23 Release date: 2012-10-31 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Innate Immune Messenger 2-5A Tethers Human RNase L into Active High-Order Complexes. Cell Rep, 2, 2012
4MBE	Sac3:Sus1:Cdc31:Nup1 complex Descriptor: CALCIUM ION, Cell division control protein 31, Nuclear mRNA export protein SAC3, ... Authors: Jani, D, Meineke, B, Stewart, M. Deposit date: 2013-08-19 Release date: 2014-07-02 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.612 Å) Cite: Structural basis for binding the TREX2 complex to nuclear pores, GAL1 localisation and mRNA export. Nucleic Acids Res., 42, 2014
4Q11	Crystal structure of Proteus mirabilis transcriptional regulator protein Crl at 1.95A resolution Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, Sigma factor-binding protein Crl Authors: Norel, F, Mayer, C, Saul, F.A, Haouz, A. Deposit date: 2014-04-02 Release date: 2014-08-06 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Structural and functional features of Crl proteins and identification of conserved surface residues required for interaction with the RpoS/ sigma S subunit of RNA polymerase. Biochem.J., 463, 2014
3L29	Crystal Structure of Zaire Ebola VP35 interferon inhibitory domain K319A/R322A mutant Descriptor: CHLORIDE ION, Polymerase cofactor VP35 Authors: Leung, D.W, Ramanan, P, Borek, D.M, Amarasinghe, G.K. Deposit date: 2009-12-14 Release date: 2010-02-02 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Mutations abrogating VP35 interaction with double-stranded RNA render ebola virus avirulent in guinea pigs. J.Virol., 84, 2010
4J3C	Crystal structure of 16S ribosomal RNA methyltransferase RsmE Descriptor: Ribosomal RNA small subunit methyltransferase E Authors: Eswaramoorthy, S, Chamala, S, Evans, B, Foti, F, Gizzi, A, Hillerich, B, Kar, A, Lafleur, J, Seidel, R, Villigas, G, Zencheck, W, Al Obaidi, N, Almo, S.C, Swaminathan, S, New York Structural Genomics Research Consortium (NYSGRC) Deposit date: 2013-02-05 Release date: 2013-02-20 Method: X-RAY DIFFRACTION (2 Å) Cite: Crystal structure of 16S ribosomal RNA methyltransferase RsmE TO BE PUBLISHED
1JR6	Solution Structure of an Engineered Arginine-rich Subdomain 2 of the Hepatitis C Virus NS3 RNA Helicase Descriptor: Helicase NS3 Authors: Liu, D, Wyss, D.F, Wang, Y.S, Gesell, J.J. Deposit date: 2001-08-10 Release date: 2002-08-10 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Solution structure and backbone dynamics of an engineered arginine-rich subdomain 2 of the hepatitis C virus NS3 RNA helicase. J.Mol.Biol., 314, 2001
2XYR	Crystal structure of the nsp16 nsp10 SARS coronavirus complex Descriptor: CHLORIDE ION, MAGNESIUM ION, NON-STRUCTURAL PROTEIN 10, ... Authors: Decroly, E, Debarnot, C, Ferron, F, Bouvet, M, Coutard, B, Imbert, I, Gluais, L, Papageorgiou, N, Ortiz-Lombardia, M, Lescar, J, Canard, B. Deposit date: 2010-11-18 Release date: 2011-10-26 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Crystal Structure and Functional Analysis of the Sars-Coronavirus RNA CAP 2'-O-Methyltransferase Nsp10/Nsp16 Complex. Plos Pathog., 7, 2011
4RX1	Crystal Structure of antibiotic-resistance methyltransferase Kmr Descriptor: GLYCEROL, IODIDE ION, Putative rRNA methyltransferase Authors: Savic, M. Deposit date: 2014-12-08 Release date: 2015-03-11 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.472 Å) Cite: 30S Subunit-Dependent Activation of the Sorangium cellulosum So ce56 Aminoglycoside Resistance-Conferring 16S rRNA Methyltransferase Kmr. Antimicrob.Agents Chemother., 59, 2015
3GO5	Crystal structure of a multidomain protein with nucleic acid binding domains (sp_0946) from streptococcus pneumoniae tigr4 at 1.40 A resolution Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Multidomain protein with S1 RNA-binding domains Authors: Joint Center for Structural Genomics (JCSG) Deposit date: 2009-03-18 Release date: 2009-04-07 Last modified: 2023-02-01 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Structure of a virulence regulatory factor CvfB reveals a novel winged helix RNA binding module. Structure, 18, 2010
4GEL	Crystal structure of Zucchini Descriptor: 1,2-ETHANEDIOL, Mitochondrial cardiolipin hydrolase, PHOSPHATE ION, ... Authors: Nishimasu, H, Fukuhara, S, Ishitani, R, Nureki, O. Deposit date: 2012-08-02 Release date: 2012-10-17 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (1.756 Å) Cite: Structure and function of Zucchini endoribonuclease in piRNA biogenesis Nature, 491, 2012
4FTS	Crystal structure of the N363T mutant of the Flock House virus capsid Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, CHLORIDE ION, ... Authors: Speir, J.A, Chen, Z, Reddy, V.S, Johnson, J.E. Deposit date: 2012-06-28 Release date: 2012-08-01 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (3.2 Å) Cite: Structural study of virus assembly intermediates reveals maturation event sequence and a staging position for externalized lytic peptides to be published, 2012
4GEN	Crystal structure of Zucchini (monomer) Descriptor: CHLORIDE ION, Mitochondrial cardiolipin hydrolase Authors: Nishimasu, H, Fukuhara, S, Ishitani, R, Nureki, O. Deposit date: 2012-08-02 Release date: 2012-10-17 Last modified: 2017-11-15 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Structure and function of Zucchini endoribonuclease in piRNA biogenesis Nature, 491, 2012
1N2V	Crystal Structure of TGT in complex with 2-Butyl-5,6-dihydro-1H-imidazo[4,5-d]pyridazine-4,7-dione Descriptor: 2-BUTYL-5,6-DIHYDRO-1H-IMIDAZO[4,5-D]PYRIDAZINE-4,7-DIONE, Queuine tRNA-ribosyltransferase, ZINC ION Authors: Brenk, R, Naerum, L, Graedler, U, Gerber, H.-D, Garcia, G.A, Reuter, K, Stubbs, M.T, Klebe, G. Deposit date: 2002-10-24 Release date: 2003-04-08 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Virtual screening for submicromolar leads of tRNA-guanine transglycosylase based on a new unexpected binding mode detected by crystal structure analysis J.Med.Chem., 46, 2003

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