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2VPJ
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BU of 2vpj by Molmil
Crystal structure of the Kelch domain of human KLHL12
Descriptor: ACETATE ION, KELCH-LIKE PROTEIN 12
Authors:Keates, T, Pike, A.C.W, Bullock, A.N, Salah, E, Filippakopoulos, P, Roos, A.K, von Delft, F, Savitsky, P, Weigelt, J, Edwards, A, Arrowsmith, C.H, Bountra, C, Knapp, S.
Deposit date:2008-02-29
Release date:2008-03-18
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural Basis for Cul3 Assembly with the Btb-Kelch Family of E3 Ubiquitin Ligases.
J.Biol.Chem., 288, 2013
1X69
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BU of 1x69 by Molmil
Solution structures of the SH3 domain of human Src substrate cortactin
Descriptor: cortactin isoform a
Authors:Sato, M, Tochio, N, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-05-17
Release date:2005-11-17
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structures of the SH3 domain of human Src substrate cortactin
To be Published
4TTI
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BU of 4tti by Molmil
Crystal structure of double mutant E. Coli purine nucleoside phosphorylase with 4 FMC molecules
Descriptor: (1S)-1-(7-amino-1H-pyrazolo[4,3-d]pyrimidin-3-yl)-1,4-anhydro-D-ribitol, PHOSPHATE ION, Purine nucleoside phosphorylase DeoD-type, ...
Authors:Stefanic, Z, Bzowska, A.
Deposit date:2014-06-21
Release date:2015-07-08
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Crystallographic snapshots of ligand binding to hexameric purine nucleoside phosphorylase and kinetic studies give insight into the mechanism of catalysis.
Sci Rep, 8, 2018
1X65
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BU of 1x65 by Molmil
Solution structure of the third cold-shock domain of the human KIAA0885 protein (UNR PROTEIN)
Descriptor: UNR protein
Authors:Goroncy, A.K, Kigawa, T, Koshiba, S, Kobayashi, N, Tochio, N, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-05-17
Release date:2005-11-17
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:The NMR solution structures of the five constituent cold-shock domains (CSD) of the human UNR (upstream of N-ras) protein.
J.Struct.Funct.Genom., 11, 2010
4Z9O
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BU of 4z9o by Molmil
Crystal Structure of human GGT1
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
Authors:Terzyan, S.S, Hanigan, M.H.
Deposit date:2015-04-10
Release date:2015-06-03
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Human gamma-Glutamyl Transpeptidase 1: STRUCTURES OF THE FREE ENZYME, INHIBITOR-BOUND TETRAHEDRAL TRANSITION STATES, AND GLUTAMATE-BOUND ENZYME REVEAL NOVEL MOVEMENT WITHIN THE ACTIVE SITE DURING CATALYSIS.
J.Biol.Chem., 290, 2015
3UN6
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BU of 3un6 by Molmil
2.0 Angstrom Crystal Structure of Ligand Binding Component of ABC-type Import System from Staphylococcus aureus with Zinc bound
Descriptor: ABC transporter substrate-binding protein, PHOSPHATE ION, ZINC ION
Authors:Minasov, G, Wawrzak, Z, Halavaty, A, Shuvalova, L, Dubrovska, I, Winsor, J, Kiryukhina, O, Bagnoli, F, Falugi, F, Bottomley, M, Grandi, G, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2011-11-15
Release date:2011-12-07
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:2.0 Angstrom Crystal Structure of Ligand Binding Component of ABC-type Import System from Staphylococcus aureus with Zinc bound.
TO BE PUBLISHED
2A26
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BU of 2a26 by Molmil
Crystal structure of the N-terminal, dimerization domain of Siah Interacting Protein
Descriptor: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, Calcyclin-binding protein, SULFATE ION
Authors:Santelli, E, Leone, M, Li, C, Fukushima, T, Preece, N.E, Olson, A.J, Ely, K.R, Reed, J.C, Pellecchia, M, Liddington, R.C, Matsuzawa, S.
Deposit date:2005-06-21
Release date:2005-08-09
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structural Analysis of Siah1-Siah-interacting Protein Interactions and Insights into the Assembly of an E3 Ligase Multiprotein Complex
J.Biol.Chem., 280, 2005
4TS3
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BU of 4ts3 by Molmil
Wild type E. Coli purine nucleoside phosphorylase with 2 FMC molecules in active sites
Descriptor: (1S)-1-(7-amino-1H-pyrazolo[4,3-d]pyrimidin-3-yl)-1,4-anhydro-D-ribitol, PHOSPHATE ION, Purine nucleoside phosphorylase DeoD-type
Authors:Stefanic, Z, Bzowska, A.
Deposit date:2014-06-18
Release date:2015-07-08
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystallographic snapshots of ligand binding to hexameric purine nucleoside phosphorylase and kinetic studies give insight into the mechanism of catalysis.
Sci Rep, 8, 2018
6C41
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BU of 6c41 by Molmil
The clavanin peptide in the presence of TFE (2,2,2-trifluoroethanol), presented a amphipathic alpha-helices from Phe-2 to Val-22 residues
Descriptor: Clavanin-A
Authors:Alves, E.S.F, Liao, L.M.
Deposit date:2018-01-11
Release date:2018-02-07
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural Studies of a Lipid-Binding Peptide from Tunicate Hemocytes with Anti-Biofilm Activity.
Sci Rep, 6, 2016
6QBK
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BU of 6qbk by Molmil
NMR Structure of Big-defensin 1 [44-93] from oyster Crassostrea gigas
Descriptor: Big defensin 1
Authors:Loth, K, Meudal, H, Delmas, A.F.
Deposit date:2018-12-21
Release date:2019-12-11
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:The Ancestral N-Terminal Domain of Big Defensins Drives Bacterially Triggered Assembly into Antimicrobial Nanonets.
Mbio, 10, 2019
5YXL
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BU of 5yxl by Molmil
A ligand M binding to FXR
Descriptor: 2-methoxyethyl propan-2-yl 2,6-dimethyl-4-(3-nitrophenyl)pyridine-3,5-dicarboxylate, Bile acid receptor, Peptide from Nuclear receptor coactivator 2
Authors:Yi, L, Yong, L.
Deposit date:2017-12-05
Release date:2019-03-13
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:A ligand M binding to FXR
To Be Published
5YXB
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BU of 5yxb by Molmil
A ligand binding to FXR
Descriptor: 2-methoxyethyl (2E)-3-phenylprop-2-en-1-yl 2,6-dimethyl-4-(3-nitrophenyl)pyridine-3,5-dicarboxylate, Bile acid receptor, Peptide from Nuclear receptor coactivator 2
Authors:Yi, L, Yong, L.
Deposit date:2017-12-04
Release date:2019-03-13
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:A ligand binding to FXR
To Be Published
6G0F
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BU of 6g0f by Molmil
BRD4 (BD1) in complex with docking-derived ligand
Descriptor: (4~{R})-4-(5-bromanyl-2-fluoranyl-phenyl)-5,6,7-trimethoxy-3,4-dihydro-1~{H}-quinolin-2-one, 1,2-ETHANEDIOL, Bromodomain-containing protein 4
Authors:Pretzel, J, Humbeck, L.
Deposit date:2018-03-18
Release date:2020-01-08
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.618 Å)
Cite:Discovery of an Unexpected Similarity in Ligand Binding Between BRD4 and PPARgamma
Chemrxiv, 2019
3WMH
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BU of 3wmh by Molmil
Human PPAR gamma ligand binding domain in complex with a gammma selective synthetic partial agonist MEKT75
Descriptor: N-(phenylsulfonyl)-4-propoxy-3-({[4-(pyrimidin-2-yl)benzoyl]amino}methyl)benzamide, Peroxisome proliferator-activated receptor gamma
Authors:Oyama, T, Ohashi, M, Miyachi, H, Kusunoki, M.
Deposit date:2013-11-19
Release date:2014-11-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Human PPRR gamma ligand binding domain in complex with a gammma selective synthetic partial agonist MEKT75
TO BE PUBLISHED
1WEP
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BU of 1wep by Molmil
Solution structure of PHD domain in PHF8
Descriptor: PHF8, ZINC ION
Authors:He, F, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Muto, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-25
Release date:2004-11-25
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of PHD domain in protein AA017385
To be Published
1WFP
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BU of 1wfp by Molmil
Solution structure of the zf-AN1 domain from Arabiopsis thaliana F5O11.17 protein
Descriptor: ZINC ION, zinc finger (AN1-like) family protein
Authors:Tomizawa, T, Kigawa, T, Nemoto, N, Koshiba, S, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-26
Release date:2004-11-26
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the zf-AN1 domain from Arabiopsis thaliana F5O11.17 protein
To be Published
1WEL
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BU of 1wel by Molmil
Solution structure of RNA binding domain in NP_006038
Descriptor: RNA-binding protein 12
Authors:Someya, T, Muto, Y, Nagata, T, Suzuki, S, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-25
Release date:2005-08-23
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of RNA binding domain in NP_006038
To be Published
1WFS
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BU of 1wfs by Molmil
Solution Structure of Glia Maturation Factor-gamma from Mus Musculus
Descriptor: Glia maturation factor gamma
Authors:Goroncy, A.K, Kigawa, T, Koshiba, S, Kobayashi, N, Tochio, N, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-26
Release date:2004-11-26
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:NMR solution structures of actin depolymerizing factor homology domains.
Protein Sci., 18, 2009
1WFV
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BU of 1wfv by Molmil
Solution structure of the fifth PDZ domain of human membrane associated guanylate kinase inverted-2 (KIAA0705 protein)
Descriptor: membrane associated guanylate kinase inverted-2
Authors:Tochio, N, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-27
Release date:2004-11-27
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the fifth PDZ domain of human membrane associated guanylate kinase inverted-2 (KIAA0705 protein)
To be Published
1WGE
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BU of 1wge by Molmil
Solution structure of the mouse DESR1
Descriptor: Hypothetical protein 2610018L09Rik, ZINC ION
Authors:Nakanishi, T, Tochio, N, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-28
Release date:2005-08-23
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the mouse DESR1
To be Published
1WGY
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BU of 1wgy by Molmil
RA domain of guanine nucleotide exchange factor for Rap1
Descriptor: Rap guanine nucleotide exchange factor 5
Authors:Nagashima, T, Tochio, N, Kigawa, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-28
Release date:2004-11-28
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:RA domain of guanine nucleotide exchange factor for Rap1
TO BE PUBLISHED
1WHG
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BU of 1whg by Molmil
Solution structure of the CAP-Gly domain in mouse tubulin specific chaperone B
Descriptor: Tubulin specific chaperone B
Authors:Saito, K, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-28
Release date:2004-11-28
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the CAP-Gly domain in mouse tubulin specific chaperone B
To be Published
1WI4
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BU of 1wi4 by Molmil
Solution structure of the PDZ domain of syntaxin binding protein 4
Descriptor: syntaxin binding protein 4
Authors:Endo, H, Tomizawa, T, Kigawa, T, Yoshida, M, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-28
Release date:2005-06-07
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the PDZ domain of syntaxin binding protein 4
To be published
1WIL
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BU of 1wil by Molmil
Solution Structure of the RING Finger Domain of the Human KIAA1045 Protein
Descriptor: KIAA1045 protein, ZINC ION
Authors:Miyamoto, K, Tochio, N, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-28
Release date:2004-11-28
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution Structure of the RING Finger Domain of the Human KIAA1045 Protein
To be Published
6GG2
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BU of 6gg2 by Molmil
The structure of FsqB from Aspergillus fumigatus, a flavoenzyme of the amine oxidase family
Descriptor: Amino acid oxidase fmpA, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Pavkov-Keller, T, Lahham, M, Macheroux, P, Gruber, K.
Deposit date:2018-05-02
Release date:2018-09-19
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.598 Å)
Cite:Oxidative cyclization ofN-methyl-dopa by a fungal flavoenzyme of the amine oxidase family.
J. Biol. Chem., 293, 2018

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