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1GD6
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BU of 1gd6 by Molmil
STRUCTURE OF THE BOMBYX MORI LYSOZYME
Descriptor: LYSOZYME
Authors:Matsuura, A, Aizawa, T, Yao, M, Kawano, K, Tanaka, I, Nitta, K.
Deposit date:2000-09-19
Release date:2001-03-21
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural analysis of an insect lysozyme exhibiting catalytic efficiency at low temperatures.
Biochemistry, 41, 2002
2Q8I
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BU of 2q8i by Molmil
Pyruvate dehydrogenase kinase isoform 3 in complex with antitumor drug radicicol
Descriptor: DIHYDROLIPOIC ACID, Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, GLYCEROL, ...
Authors:Kato, M, Li, J, Chuang, J.L, Chuang, D.T.
Deposit date:2007-06-10
Release date:2007-07-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Distinct Structural Mechanisms for Inhibition of Pyruvate Dehydrogenase Kinase Isoforms by AZD7545, Dichloroacetate, and Radicicol.
Structure, 15, 2007
1FYC
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BU of 1fyc by Molmil
INNER LIPOYL DOMAIN FROM HUMAN PYRUVATE DEHYDROGENASE (PDH) COMPLEX, NMR, 1 STRUCTURE
Descriptor: DIHYDROLIPOAMIDE ACETYLTRANSFERASE (E2P)
Authors:Howard, M.J, Fuller, C, Broadhurst, R.W, Quinn, J, Yeaman, S.J, Perham, R.N.
Deposit date:1997-02-21
Release date:1997-09-04
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Three-dimensional structure of the major autoantigen in primary biliary cirrhosis.
Gastroenterology, 115, 1998
5YGP
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BU of 5ygp by Molmil
Human TNFRSF25 death domain mutant-D412E
Descriptor: SULFATE ION, TNFRSF25 death domain, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Yin, X, Jin, T.C.
Deposit date:2017-09-25
Release date:2018-10-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Crystal structure and activation mechanism of DR3 death domain.
Febs J., 286, 2019
5Y07
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BU of 5y07 by Molmil
Crystal structure of adenine phosphoribosyltransferase from Yersinia pseudotuberculosis with PRPP.
Descriptor: 1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose, Adenine phosphoribosyltransferase, MAGNESIUM ION, ...
Authors:Pavithra, G.C, Ramagopal, U.A.
Deposit date:2017-07-25
Release date:2018-08-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Crystal structure of adenine phosphoribosyltransferase from Yersinia pseudotuberculosis with PRPP
To be published
5Y4A
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BU of 5y4a by Molmil
Cadmium directed assembly of adenine phosphoribosyltransferase from Yersinia pseudotuberculosis.
Descriptor: Adenine phosphoribosyltransferase, CADMIUM ION, SODIUM ION, ...
Authors:Pavithra, G.C, Ramagopal, U.A.
Deposit date:2017-08-02
Release date:2018-08-08
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Cadmium directed assembly of adenine phosphoribosyltransferase from Yersinia pseudotuberculosis.
To be published
5Y2G
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BU of 5y2g by Molmil
Structure of MBP tagged GBS CAMP
Descriptor: Maltose-binding periplasmic protein,Protein B, SULFATE ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Jin, T, Li, Y.
Deposit date:2017-07-25
Release date:2019-02-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure determination of the CAMP factor of Streptococcus agalactiae with the aid of an MBP tag and insights into membrane-surface attachment.
Acta Crystallogr D Struct Biol, 75, 2019
7U0G
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BU of 7u0g by Molmil
structure of LIN28b nucleosome bound 3 OCT4
Descriptor: DNA (162-MER), Histone H2A type 2-C, Histone H2B type 2-E, ...
Authors:Lian, T, Guan, R, Bai, Y.
Deposit date:2022-02-18
Release date:2023-06-28
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Structural mechanism of LIN28B nucleosome targeting by OCT4.
Mol.Cell, 83, 2023
7U0I
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BU of 7u0i by Molmil
Structure of LIN28b nucleosome bound 2 OCT4
Descriptor: DNA (162-MER), Histone H2A type 2-C, Histone H2B type 2-E, ...
Authors:Tengfei, L, Guan, R, Bai, Y.
Deposit date:2022-02-18
Release date:2023-06-28
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Structural mechanism of LIN28B nucleosome targeting by OCT4.
Mol.Cell, 83, 2023
5YGS
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BU of 5ygs by Molmil
Human TNFRSF25 death domain
Descriptor: Human TNRSF25 death domain, SULFATE ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Yin, X, Jin, T.
Deposit date:2017-09-26
Release date:2018-10-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.691 Å)
Cite:Crystal structure and activation mechanism of DR3 death domain.
Febs J., 286, 2019
6KEA
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BU of 6kea by Molmil
crystal structure of MBP-tagged REV7-IpaB complex
Descriptor: Maltose-binding periplasmic protein,LINKER,hREV7,LINKER,Invasin IpaB,hREV3
Authors:Wang, X, Pernicone, N, Pertz, L, Hua, D.P, Zhang, T.Q, Listovsky, T, Xie, W.
Deposit date:2019-07-04
Release date:2019-09-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:REV7 has a dynamic adaptor region to accommodate small GTPase RAN/ShigellaIpaB ligands, and its activity is regulated by the RanGTP/GDP switch.
J.Biol.Chem., 294, 2019
5ZOC
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BU of 5zoc by Molmil
Crystal structure of APRT from Y. pseudotuberculosis with bound adenine (C2 space group).
Descriptor: ADENINE, Adenine phosphoribosyltransferase, SODIUM ION
Authors:Pavithra, G.C, Ramagopal, U.A.
Deposit date:2018-04-12
Release date:2019-04-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Crystal structure of APRT from Y. pseudotuberculosis with bound adenine (C2 space group).
To be published
6JYZ
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BU of 6jyz by Molmil
Crystal structure of endogalactoceramidase
Descriptor: 1,2-ETHANEDIOL, 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, ISOPROPYL ALCOHOL, ...
Authors:Liuqing, C, Yan, F.
Deposit date:2019-04-29
Release date:2019-10-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Structure of an endogalactosylceramidase from Rhodococcus hoagii 103S reveals the molecular basis of its substrate specificity.
J.Struct.Biol., 208, 2019
5YW5
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BU of 5yw5 by Molmil
Crystal structure of Adenine phosphoribosyltransferase from Francisella tularensis in complex with adenine
Descriptor: ADENINE, Adenine phosphoribosyltransferase
Authors:Pavithra, G.C, Ramagopal, U.A.
Deposit date:2017-11-28
Release date:2018-01-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of APRT from Francisella tularensis - an N-H···N hydrogen bond imparts adenine specificity in adenine phosporibosyltransferases.
FEBS J., 285, 2018
5ZCA
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BU of 5zca by Molmil
Crystal structure of lambda repressor (1-20) fused with maltose-binding protein
Descriptor: CITRIC ACID, Repressor protein cI,Maltose-binding periplasmic protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Hanazono, Y, Takeda, K, Miki, K.
Deposit date:2018-02-16
Release date:2018-08-15
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.801 Å)
Cite:Co-translational folding of alpha-helical proteins: structural studies of intermediate-length variants of the lambda repressor
Febs Open Bio, 8, 2018
6K25
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BU of 6k25 by Molmil
Crystal structure of Ca-unbound human Annexin A5 in low salt condition
Descriptor: Annexin A5
Authors:Hong, S, Ha, N.-C.
Deposit date:2019-05-13
Release date:2020-03-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.401 Å)
Cite:High-resolution structures of annexin A5 in a two-dimensional array.
J.Struct.Biol., 209, 2020
7UAJ
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BU of 7uaj by Molmil
Crystal structure of apo HPV16 E6
Descriptor: Maltose/maltodextrin-binding periplasmic protein,Protein E6, ZINC ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Shen, Q, Leonard, P.G, Cross, J.B.
Deposit date:2022-03-13
Release date:2023-03-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Disorder-to-order transition of the interdomain linker of HPV E6 upon E6AP binding reshapes p53 binding pocket
To Be Published
6KFQ
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BU of 6kfq by Molmil
Crystal structure of thermophilic rhodopsin from Rubrobacter xylanophilus
Descriptor: RETINAL, Rhodopsin, SULFATE ION, ...
Authors:Suzuki, K, Akiyama, T, Hayashi, T, Yasuda, S, Kanehara, K, Kojima, K, Tanabe, M, Kato, R, Senda, T, Sudo, Y, Kinoshita, M, Murata, T.
Deposit date:2019-07-08
Release date:2020-04-08
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:How Does a Microbial Rhodopsin RxR Realize Its Exceptionally High Thermostability with the Proton-Pumping Function Being Retained?
J.Phys.Chem.B, 124, 2020
6K7E
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BU of 6k7e by Molmil
Crystal structure of MBPapo-Tim21 fusion protein with a 17-residue helical linker
Descriptor: Maltose/maltodextrin-binding periplasmic protein,Mitochondrial import inner membrane translocase subunit TIM21
Authors:Bala, S, Shimada, A, Kohda, D.
Deposit date:2019-06-07
Release date:2019-09-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.534 Å)
Cite:Crystal contact-free conformation of an intrinsically flexible loop in protein crystal: Tim21 as the case study.
Biochim Biophys Acta Gen Subj, 1864, 2020
5ZMI
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BU of 5zmi by Molmil
Crystal structure of APRT from Y. pseudotuberculosis in complex with adenine.
Descriptor: ADENINE, Adenine phosphoribosyltransferase, SODIUM ION
Authors:Pavithra, G.C, Fox, G.C, Ramagopal, U.A.
Deposit date:2018-04-03
Release date:2019-04-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structure of adenine phosphoribosyltransferase from Yersinia pseudotuberculosis
To be published
5ZC7
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BU of 5zc7 by Molmil
Crystal structure of APRT from Y. pseudotuberculosis with bound adenine (P63 space group).
Descriptor: ACETATE ION, ADENINE, Adenine phosphoribosyltransferase, ...
Authors:Pavithra, G.C, Ramagopal, U.A.
Deposit date:2018-02-15
Release date:2019-02-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of adenine phosphoribosyltransferase from Yersinia pseudotuberculosis
To be published
5Z0V
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BU of 5z0v by Molmil
Structural insight into the Zika virus capsid encapsulating the viral genome
Descriptor: Extracellular solute-binding protein family 1,viral genome protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Li, T, Zhao, Q, Yang, X, Chen, C, Yang, K, Wu, C, Zhang, T, Duan, Y, Xue, X, Mi, K, Ji, X, Wang, Z, Yang, H.
Deposit date:2017-12-21
Release date:2018-04-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.913 Å)
Cite:Structural insight into the Zika virus capsid encapsulating the viral genome.
Cell Res., 28, 2018
6KXG
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BU of 6kxg by Molmil
Crystal structure of caspase-11-CARD
Descriptor: caspase-11-CARD
Authors:Liu, M.Z.Y, Jin, T.C.
Deposit date:2019-09-11
Release date:2020-09-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.805 Å)
Cite:Crystal structure of caspase-11 CARD provides insights into caspase-11 activation.
Cell Discov, 6, 2020
7UN9
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BU of 7un9 by Molmil
SfSTING with c-di-GMP double fiber
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), CD-NTase-associated protein 12
Authors:Morehouse, B.R, Yip, M.C.J, Keszei, A.F.A, McNamara-Bordewick, N.K, Shao, S, Kranzusch, P.J.
Deposit date:2022-04-09
Release date:2022-07-27
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo-EM structure of an active bacterial TIR-STING filament complex.
Nature, 608, 2022
6LES
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BU of 6les by Molmil
3D domain-swapped dimer of the maltose-binding protein fused to a fragment of the focal adhesion kinase
Descriptor: Maltose/maltodextrin-binding periplasmic protein,Focal adhesion kinase 1, SULFATE ION
Authors:Momin, A.A, Shahul Hameed, U.F, Arold, S.T.
Deposit date:2019-11-26
Release date:2019-12-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.004 Å)
Cite:Passenger sequences can promote interlaced dimers in a common variant of the maltose-binding protein.
Sci Rep, 9, 2019

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