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3M9Q
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Drosophila MSL3 chromodomain
Descriptor: Protein male-specific lethal-3
Authors:Kim, D, Huang, P, Rastinejad, F, Khorasanizadeh, S.
Deposit date:2010-03-22
Release date:2010-07-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:Corecognition of DNA and a methylated histone tail by the MSL3 chromodomain.
Nat.Struct.Mol.Biol., 17, 2010
3ELM
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BU of 3elm by Molmil
Crystal Structure of MMP-13 Complexed with Inhibitor 24f
Descriptor: (2R)-({[5-(4-ethoxyphenyl)thiophen-2-yl]sulfonyl}amino){1-[(1-methylethoxy)carbonyl]piperidin-4-yl}ethanoic acid, CALCIUM ION, Collagenase 3, ...
Authors:Kulathila, R, Monovich, L, Koehn, J.
Deposit date:2008-09-22
Release date:2009-07-21
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Discovery of potent, selective, and orally active carboxylic acid based inhibitors of matrix metalloproteinase-13
J.Med.Chem., 52, 2009
3EM6
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Crystal structure of I50L/A71V mutant of hiv-1 protease in complex with inhibitor darunavir
Descriptor: (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE, ACETATE ION, PHOSPHATE ION, ...
Authors:Royer, C.J, King, N.M, Prabu-Jeyabalan, M, Ng, C, Nalivaika, E.A, Schiffer, C.A.
Deposit date:2008-09-23
Release date:2009-09-01
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Kinetic and structural studies on atazanavir specific I50L drug-resistant HIV-1 protease mutant.
To be Published
4HKO
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BU of 4hko by Molmil
Crystal Structures of Mutant Endo-beta-1,4-xylanase II (E177Q) in the apo form
Descriptor: Endo-1,4-beta-xylanase 2, IODIDE ION
Authors:Langan, P, Wan, Q, Coates, L, Kovalevsky, A.
Deposit date:2012-10-15
Release date:2014-01-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:X-ray crystallographic studies of family 11 xylanase Michaelis and product complexes: implications for the catalytic mechanism.
Acta Crystallogr.,Sect.D, 70, 2014
4HPV
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BU of 4hpv by Molmil
Crystal structure of S-Adenosylmethionine synthetase from Sulfolobus solfataricus
Descriptor: S-adenosylmethionine synthase
Authors:Wang, F, Hurley, K.A, Helmich, K.E, Singh, S, Bingman, C.A, Thorson, J.S, Phillips Jr, G.N, Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2012-10-24
Release date:2012-11-14
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (2.214 Å)
Cite:Understanding molecular recognition of promiscuity of thermophilic methionine adenosyltransferase sMAT from Sulfolobus solfataricus.
Febs J., 281, 2014
4MCO
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BU of 4mco by Molmil
Crystal structure of a TRAP periplasmic solute binding protein from Rhodoferax ferrireducens (Rfer_1840), target EFI-510211, with bound malonate
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, MALONATE ION, TRAP dicarboxylate transporter-DctP subunit
Authors:Vetting, M.W, Toro, R, Bhosle, R, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Sojitra, S, Zhao, S, Stead, M, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Jacobson, M.P, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2013-08-21
Release date:2013-09-04
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Experimental strategies for functional annotation and metabolism discovery: targeted screening of solute binding proteins and unbiased panning of metabolomes.
Biochemistry, 54, 2015
4MEV
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Crystal structure of a TRAP periplasmic solute binding protein from Rhodoferax ferrireducens (Rfer_1840), Target EFI-510211, with bound malonate, space group I422
Descriptor: CITRIC ACID, MALONATE ION, TRAP dicarboxylate transporter-DctP subunit
Authors:Vetting, M.W, Toro, R, Bhosle, R, Al Obaidi, N.F, Zhao, S, Stead, M, Washington, E, Scott Glenn, A, Chowdhury, S, Evans, B, Hammonds, J, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Jacobson, M.P, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2013-08-27
Release date:2013-09-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Experimental strategies for functional annotation and metabolism discovery: targeted screening of solute binding proteins and unbiased panning of metabolomes.
Biochemistry, 54, 2015
3M9M
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BU of 3m9m by Molmil
Crystal Structure of Dpo4 in complex with DNA containing the major cisplatin lesion
Descriptor: CALCIUM ION, CYTIDINE-5'-TRIPHOSPHATE, Cisplatin, ...
Authors:Wong, J.H.Y, Ling, H.
Deposit date:2010-03-22
Release date:2010-06-16
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural insight into dynamic bypass of the major cisplatin-DNA adduct by Y-family polymerase Dpo4.
Embo J., 29, 2010
4HPS
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BU of 4hps by Molmil
Crystal Structure of a Pyrrolidone-carboxylate peptidase 1 (target ID NYSGRC-012831) from Xenorhabdus bovienii SS-2004 in space group P21
Descriptor: CHLORIDE ION, Pyrrolidone-carboxylate peptidase
Authors:Ghosh, A, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC)
Deposit date:2012-10-24
Release date:2012-11-14
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal Structure of a Pyrrolidone-carboxylate peptidase 1 (target ID NYSGRC-012831) from Xenorhabdus bovienii SS-2004 in space group P21
To be Published
3E87
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BU of 3e87 by Molmil
Crystal structures of the kinase domain of AKT2 in complex with ATP-competitive inhibitors
Descriptor: Glycogen synthase kinase-3 beta peptide, N-[(1S)-2-amino-1-phenylethyl]-5-(1H-pyrrolo[2,3-b]pyridin-4-yl)thiophene-2-carboxamide, RAC-beta serine/threonine-protein kinase
Authors:Concha, N.O, Elkins, P.A, Smallwood, A, Ward, P.
Deposit date:2008-08-19
Release date:2008-10-14
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Aminofurazans as potent inhibitors of AKT kinase
Bioorg.Med.Chem.Lett., 19, 2009
4HJ8
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BU of 4hj8 by Molmil
Crystal Structure of Schizosaccharomyces pombe Pot1pC bound to ssDNA (GGTTACGCT)
Descriptor: DNA (5'-D(*GP*GP*TP*TP*AP*CP*GP*CP*T)-3'), Protection of telomeres protein 1
Authors:Dickey, T.H, Wuttke, D.S.
Deposit date:2012-10-12
Release date:2012-12-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.043 Å)
Cite:Nonspecific Recognition Is Achieved in Pot1pC through the Use of Multiple Binding Modes.
Structure, 21, 2013
3E8X
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BU of 3e8x by Molmil
Putative NAD-dependent epimerase/dehydratase from Bacillus halodurans.
Descriptor: CHLORIDE ION, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Putative NAD-dependent epimerase/dehydratase
Authors:Osipiuk, J, Skarina, T, Onopriyenko, O, Savchenko, A, Edwards, A.M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2008-08-20
Release date:2008-09-02
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:X-ray crystal structure of putative NAD-dependent epimerase/dehydratase from Bacillus halodurans.
To be Published
3MAK
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BU of 3mak by Molmil
Crystal structure of Glutathione transferase dmGSTD1 from Drosophila melanogaster, in complex with glutathione
Descriptor: GLUTATHIONE, Glutathione S-transferase 1-1
Authors:Wongsantichon, J, Robinson, R.C, Ketterman, A.J.
Deposit date:2010-03-24
Release date:2011-03-30
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural evidence for conformational changes of Delta class glutathione transferases after ligand binding
Arch.Biochem.Biophys., 521, 2012
4HK7
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BU of 4hk7 by Molmil
Crystal structure of Cordyceps militaris IDCase in complex with uracil
Descriptor: URACIL, Uracil-5-carboxylate decarboxylase, ZINC ION
Authors:Xu, S, Zhu, J, Ding, J.
Deposit date:2012-10-15
Release date:2013-09-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.189 Å)
Cite:Crystal structures of isoorotate decarboxylases reveal a novel catalytic mechanism of 5-carboxyl-uracil decarboxylation and shed light on the search for DNA decarboxylase.
Cell Res., 23, 2013
4HL6
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BU of 4hl6 by Molmil
YfdE from Escherichia coli
Descriptor: Uncharacterized protein YfdE
Authors:Mullins, E.A, Sullivan, K.L, Nyffeler, K.E, Kappock, T.J.
Deposit date:2012-10-16
Release date:2013-05-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Function and X-Ray crystal structure of Escherichia coli YfdE.
Plos One, 8, 2013
4HID
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BU of 4hid by Molmil
Crystal Structure of Schizosaccharomyces pombe Pot1pC bound to ssDNA (GCTTACGGT)
Descriptor: DNA (5'-D(*GP*CP*TP*TP*AP*CP*GP*GP*T)-3'), Protection of telomeres protein 1
Authors:Dickey, T.H, Wuttke, D.S.
Deposit date:2012-10-11
Release date:2012-12-12
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.822 Å)
Cite:Nonspecific Recognition Is Achieved in Pot1pC through the Use of Multiple Binding Modes.
Structure, 21, 2013
3MJM
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BU of 3mjm by Molmil
His257Ala mutant of dihydroorotase from E. coli
Descriptor: (4S)-2,6-DIOXOHEXAHYDROPYRIMIDINE-4-CARBOXYLIC ACID, Dihydroorotase, N-CARBAMOYL-L-ASPARTATE, ...
Authors:Ernberg, K.E, Guss, J.M, Lee, M, Maher, M.J.
Deposit date:2010-04-13
Release date:2011-03-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:His257Ala mutant of dihydroorotase from E. coli
To be Published
4HJA
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BU of 4hja by Molmil
Crystal Structure of Schizosaccharomyces pombe Pot1pC bound to ssDNA (ACGGTTACGGT)
Descriptor: DNA (5'-D(*AP*CP*GP*GP*TP*TP*AP*CP*GP*GP*T)-3'), Protection of telomeres protein 1
Authors:Dickey, T.H, Wuttke, D.S.
Deposit date:2012-10-12
Release date:2012-12-12
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Nonspecific Recognition Is Achieved in Pot1pC through the Use of Multiple Binding Modes.
Structure, 21, 2013
4HJL
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BU of 4hjl by Molmil
Naphthalene 1,2-Dioxygenase bound to 1-chloronaphthalene
Descriptor: 1,2-ETHANEDIOL, 1-chloronaphthalene, FE (III) ION, ...
Authors:Ferraro, D.J, Ramaswamy, S.
Deposit date:2012-10-12
Release date:2013-10-16
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Naphthalene 1,2-Dioxygenase bound to 1-chloronaphthalene
TO BE PUBLISHED
3MCE
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BU of 3mce by Molmil
Crystal structure of the NAC domain of alpha subunit of nascent polypeptide-associated complex(NAC)
Descriptor: IODIDE ION, Nascent polypeptide-associated complex subunit alpha
Authors:Wang, L.F, Zhang, W.C, Wang, L, Zhang, X.J.C, Li, X.M, Rao, Z.
Deposit date:2010-03-29
Release date:2010-07-14
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.396 Å)
Cite:Crystal structures of NAC domains of human nascent polypeptide-associated complex (NAC) and its alphaNAC subunit
Protein Cell, 1, 2010
3EBV
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BU of 3ebv by Molmil
Crystal structure of putative Chitinase A from Streptomyces coelicolor.
Descriptor: Chinitase A, SULFATE ION
Authors:Vigdorovich, V, Ramagopal, U.A, Toro, R, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2008-08-28
Release date:2008-09-30
Last modified:2021-02-10
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of putative Chitinase A from Streptomyces coelicolor
To be Published
4HK5
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BU of 4hk5 by Molmil
Crystal structure of Cordyceps militaris IDCase in apo form
Descriptor: Uracil-5-carboxylate decarboxylase, ZINC ION
Authors:Xu, S, Zhu, J, Ding, J.
Deposit date:2012-10-15
Release date:2013-09-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of isoorotate decarboxylases reveal a novel catalytic mechanism of 5-carboxyl-uracil decarboxylation and shed light on the search for DNA decarboxylase.
Cell Res., 23, 2013
4HNP
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BU of 4hnp by Molmil
Crystal structure of yeast 20S proteasome in complex with vinylketone carmaphycin analogue VNK1
Descriptor: N-hexanoyl-L-valyl-N~1~-[(3S,4S)-3-hydroxy-2,6-dimethylhept-1-en-4-yl]-N~5~,N~5~-dimethyl-L-glutamamide, N-hexanoyl-L-valyl-N~1~-[(3S,4S)-3-hydroxy-2,6-dimethylheptan-4-yl]-N~5~,N~5~-dimethyl-L-glutamamide, Proteasome component C1, ...
Authors:Trivella, D.B.B, Stein, M, Groll, M.
Deposit date:2012-10-20
Release date:2014-01-29
Last modified:2014-07-02
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Enzyme inhibition by hydroamination: design and mechanism of a hybrid carmaphycin-syringolin enone proteasome inhibitor.
Chem.Biol., 21, 2014
4HRW
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BU of 4hrw by Molmil
Identification of function and Mechanistic insights of Guanine deaminase from Nitrosomonas europaea
Descriptor: 5-AMINO-1H-[1,2,3]TRIAZOLO[4,5-D]PYRIMIDIN-7-OL, Cytidine and deoxycytidylate deaminase zinc-binding region, ZINC ION
Authors:Anand, R, Bitra, A, Bhukya, H, Tanwar, A.S.
Deposit date:2012-10-29
Release date:2013-06-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Identification of function and mechanistic insights of guanine deaminase from Nitrosomonas europaea: role of the C-terminal loop in catalysis
Biochemistry, 52, 2013
4HM7
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BU of 4hm7 by Molmil
Naphthalene 1,2-Dioxygenase bound to styrene
Descriptor: 1,2-ETHANEDIOL, FE (III) ION, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Ferraro, D.J, Ramaswamy, S.
Deposit date:2012-10-17
Release date:2013-10-30
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Naphthalene 1,2-Dioxygenase bound to styrene
To be Published

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