PDB: 223790 resultsInfo pagesStatus searchChemie searchBIRD

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4ILU	Crystal structure of Mycobacterium tuberculosis CarD Descriptor: RNA polymerase-binding transcription factor CarD, SULFATE ION Authors: Thakur, K.G, Kaur, G. Deposit date: 2013-01-01 Release date: 2013-10-30 Last modified: 2024-05-29 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Crystal structure of Mycobacterium tuberculosis CarD, an essential RNA polymerase binding protein, reveals a quasidomain-swapped dimeric structural architecture. Proteins, 82, 2014
3D9A	High Resolution Crystal Structure Structure of HyHel10 Fab Complexed to Hen Egg Lysozyme Descriptor: Heavy Chain of HyHel10 Antibody Fragment (Fab), Light Chain of HyHel10 Antibody Fragment (Fab), Lysozyme C Authors: DeSantis, M.E, Li, M, Shanmuganathan, A, Acchione, M, Walter, R, Wlodawer, A, Smith-Gill, S. Deposit date: 2008-05-27 Release date: 2008-06-10 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.2 Å) Cite: Light chain somatic mutations change thermodynamics of binding and water coordination in the HyHEL-10 family of antibodies. Mol.Immunol., 47, 2009
4IQ4	Structure of a 16 nm protein cage designed by fusing symmetric oligomeric domains, triple mutant, P21212 form Descriptor: Non-haem bromoperoxidase BPO-A2, Matrix protein 1 Authors: Lai, Y.-T, Sawaya, M.R, Yeates, T.O. Deposit date: 2013-01-10 Release date: 2013-07-24 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (3.495 Å) Cite: Structure and flexibility of nanoscale protein cages designed by symmetric self-assembly. J.Am.Chem.Soc., 135, 2013
2O88	Crystal structure of the N114A mutant of ABL-SH3 domain complexed with a designed high-affinity peptide ligand: implications for SH3-ligand interactions Descriptor: P41 peptide, Proto-oncogene tyrosine-protein kinase ABL1, SULFATE ION Authors: Camara-Artigas, A. Deposit date: 2006-12-12 Release date: 2007-05-01 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.75 Å) Cite: Crystallization by capillary counter-diffusion and structure determination of the N114A mutant of the SH3 domain of Abl tyrosine kinase complexed with a high-affinity peptide ligand. Acta Crystallogr.,Sect.D, 63, 2007
3DPZ	Structure of the Yellow Fluorescent Protein Citrine Frozen at 4000 Atmospheres Number 3: Structure 25 in a Series of 26 High Pressure Structures Descriptor: Green fluorescent protein Authors: Barstow, B, Kim, C.U. Deposit date: 2008-07-09 Release date: 2008-09-23 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Alteration of citrine structure by hydrostatic pressure explains the accompanying spectral shift. Proc.Natl.Acad.Sci.Usa, 105, 2008
3DQ8	Structure of the Yellow Fluorescent Protein Citrine Frozen at 1500 Atmospheres Number 2: Structure 16 in a Series of 26 High Pressure Structures Descriptor: Green fluorescent protein Authors: Barstow, B, Kim, C.U. Deposit date: 2008-07-09 Release date: 2008-09-23 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.51 Å) Cite: Alteration of citrine structure by hydrostatic pressure explains the accompanying spectral shift. Proc.Natl.Acad.Sci.Usa, 105, 2008
3RDQ	Crystal structure of R7-2 streptavidin complexed with desthiobiotin Descriptor: 6-(5-METHYL-2-OXO-IMIDAZOLIDIN-4-YL)-HEXANOIC ACID, GLYCEROL, NICKEL (II) ION, ... Authors: Malashkevich, V.N, Magalhaes, M, Czecster, C.M, Guan, R, Levy, M, Almo, S.C. Deposit date: 2011-04-01 Release date: 2011-07-06 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Evolved streptavidin mutants reveal key role of loop residue in high-affinity binding. Protein Sci., 20, 2011
3ROA	Candida glabrata dihydrofolate reductase complexed with NADPH and 6-ethyl-5-[(3R)-3-[3-methoxy-5-(morpholin-4-yl)phenyl]but-1-yn-1-yl]pyrimidine-2,4-diamine (UCP1004) Descriptor: 6-ethyl-5-{(3R)-3-[3-methoxy-5-(morpholin-4-yl)phenyl]but-1-yn-1-yl}pyrimidine-2,4-diamine, CHLORIDE ION, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ... Authors: Paulsen, J.L, Anderson, A.C. Deposit date: 2011-04-25 Release date: 2012-05-09 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.301 Å) Cite: Structural analysis of the active sites of dihydrofolate reductase from two species of Candida uncovers ligand-induced conformational changes shared among species. Bioorg.Med.Chem.Lett., 23, 2013
4EW5	C-terminal domain of inner membrane protein CigR from Salmonella enterica. Descriptor: 1,2-ETHANEDIOL, CigR Protein Authors: Osipiuk, J, Xu, X, Cui, H, Brown, R.N, Cort, J.R, Heffron, F, Nakayasu, E.S, Niemann, G.S, Merkley, E.D, Savchenko, A, Adkins, J.N, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Program for the Characterization of Secreted Effector Proteins (PCSEP) Deposit date: 2012-04-26 Release date: 2012-05-23 Last modified: 2017-11-15 Method: X-RAY DIFFRACTION (1.87 Å) Cite: C-terminal domain of inner membrane protein CigR from Salmonella enterica. To be Published
2OCJ	Human p53 core domain in the absence of DNA Descriptor: P53 TUMOR SUPPRESSOR, ZINC ION Authors: Wang, Y, Rosengarth, A, Luecke, H. Deposit date: 2006-12-20 Release date: 2007-03-06 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.05 Å) Cite: Structure of the human p53 core domain in the absence of DNA. Acta Crystallogr.,Sect.D, 63, 2007
3D8G	Crystal structure of Staphylococcal nuclease variant Delta+PHS I72R at cryogenic temperature Descriptor: CALCIUM ION, THYMIDINE-3',5'-DIPHOSPHATE, Thermonuclease Authors: Harms, M.J, Schlessman, J.L, Garcia-Moreno, E.B. Deposit date: 2008-05-23 Release date: 2009-01-06 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.99 Å) Cite: Arginine residues at internal positions in a protein are always charged. Proc.Natl.Acad.Sci.USA, 108, 2011
4E5I	Crystal structure of avian influenza virus PAn bound to compound 4 Descriptor: 5-hydroxy-2-(1-methyl-1H-imidazol-4-yl)-6-oxo-1,6-dihydropyrimidine-4-carboxylic acid, MANGANESE (II) ION, Polymerase protein PA, ... Authors: DuBois, R.M, Slavish, P.J, Webb, T.R, White, S.W. Deposit date: 2012-03-14 Release date: 2012-08-08 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.944 Å) Cite: Structural and Biochemical Basis for Development of Influenza Virus Inhibitors Targeting the PA Endonuclease. Plos Pathog., 8, 2012
3DVJ	Crystal Structure of Ca2+/CaM-CaV2.2 IQ domain (without cloning artifact, HM to TV) complex Descriptor: CALCIUM ION, Calmodulin, Voltage-dependent N-type calcium channel subunit alpha-1B Authors: Kim, E.Y, Rumpf, C.H, Fujiwara, Y, Cooley, E.S, Van Petegem, F, Minor, D.L. Deposit date: 2008-07-18 Release date: 2008-11-04 Last modified: 2024-02-21 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Structures of Ca(V)2 Ca(2+)/CaM-IQ Domain Complexes Reveal Binding Modes that Underlie Calcium-Dependent Inactivation and Facilitation. Structure, 16, 2008
4E5Q	Human Carbonic Anhydrase II in complex with cyanate Descriptor: Carbonic anhydrase 2, ZINC ION, cyanic acid Authors: West, D, McKenna, R. Deposit date: 2012-03-14 Release date: 2013-03-27 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (1.7024 Å) Cite: Human carbonic anhydrase II-cyanate inhibitor complex: putting the debate to rest. Acta Crystallogr F Struct Biol Commun, 70, 2014
3R2D	Crystal Structure of Antitermination Factors NusB and NusE in complex with dsRNA Descriptor: 30S ribosomal protein S10, 5'-R(*GP*GP*CP*UP*CP*CP*UP*UP*GP*GP*CP*A)-3', DI(HYDROXYETHYL)ETHER, ... Authors: Stagno, J.R, Ji, X. Deposit date: 2011-03-14 Release date: 2011-06-22 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.199 Å) Cite: Structural basis for RNA recognition by NusB and NusE in the initiation of transcription antitermination. Nucleic Acids Res., 39, 2011
4IOP	Crystal structure of NKp65 bound to its ligand KACL Descriptor: C-type lectin domain family 2 member A, Killer cell lectin-like receptor subfamily F member 2, alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose Authors: Li, Y. Deposit date: 2013-01-08 Release date: 2013-07-17 Last modified: 2020-07-29 Method: X-RAY DIFFRACTION (3.2 Å) Cite: Structure of NKp65 bound to its keratinocyte ligand reveals basis for genetically linked recognition in natural killer gene complex. Proc.Natl.Acad.Sci.USA, 110, 2013
3RIG	Sirt5 is an NAD-dependent protein lysine demalonylase and desuccinylase Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, NAD-dependent deacetylase sirtuin-5, ZINC ION, ... Authors: Zhou, Y. Deposit date: 2011-04-13 Release date: 2011-11-23 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2 Å) Cite: Sirt5 is a NAD-dependent protein lysine demalonylase and desuccinylase Science, 334, 2011
3DVR	Proteinase K by LB nanotemplate method after the first step of high X-Ray dose on ESRF ID14-2 beamline Descriptor: CALCIUM ION, Proteinase K Authors: Pechkova, E, Tripathi, S.K, Nicolini, C. Deposit date: 2008-07-20 Release date: 2009-07-07 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (1.02 Å) Cite: Radiation damage in protein structural characterization by Synchrotron Radiation: State of the art and Nanotechnology-based perspective To be Published
4IRR	Crystal Structure of C.elegans Thymidylate Synthase in Complex with dUMP Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, Thymidylate synthase Authors: Wilk, P, Dowiercial, A, Banaszak, K, Jarmula, A, Rypniewski, W, Rode, W. Deposit date: 2013-01-15 Release date: 2014-01-29 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (2.48 Å) Cite: Crystal Structure of C.elegans Thymidylate Synthase in Complex with dUMP To be Published
3RIU	Crystal structure of Drosophila hexameric C3PO formed by truncated Translin and Trax Descriptor: Translin, Translin associated factor X, isoform B Authors: Tian, Y, Simanshu, D.K, Patel, D.J. Deposit date: 2011-04-14 Release date: 2011-05-11 Last modified: 2017-11-08 Method: X-RAY DIFFRACTION (3.4 Å) Cite: Multimeric assembly and biochemical characterization of the Trax-translin endonuclease complex. Nat.Struct.Mol.Biol., 18, 2011
2PLY	Structure of the mRNA binding fragment of elongation factor SelB in complex with SECIS RNA. Descriptor: CALCIUM ION, CHLORIDE ION, MAGNESIUM ION, ... Authors: Soler, N, Fourmy, D, Yoshizawa, S. Deposit date: 2007-04-20 Release date: 2007-11-06 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Structural insight into a molecular switch in tandem winged-helix motifs from elongation factor SelB. J.Mol.Biol., 370, 2007
3DWE	Proteinase K by Classical hanging drop method after high X-Ray dose on ESRF ID14-2 beamline Descriptor: CALCIUM ION, Proteinase K Authors: Pechkova, E, Tripathi, S.K, Nicolini, C. Deposit date: 2008-07-22 Release date: 2009-07-07 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (0.99 Å) Cite: Radiation damage in protein structural characterization by Synchrotron Radiation: State of the art and Nanotechnology-based perspective To be Published
3R48	Crystal structure of a hetero-hexamer coiled coil Descriptor: GLYCEROL, coiled coil helix W22-L24H, coiled coil helix Y15-L24D Authors: Zaccai, N.R, Chi, B.H.C, Woolfson, D.N, Brady, R.L. Deposit date: 2011-03-17 Release date: 2011-11-16 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.0011 Å) Cite: A de novo peptide hexamer with a mutable channel. Nat.Chem.Biol., 7, 2011
4IRT	Crystal structure of a putative neuraminidase (BACOVA_03493) from Bacteroides ovatus ATCC 8483 at 1.74 A resolution Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Uncharacterized protein Authors: Joint Center for Structural Genomics (JCSG) Deposit date: 2013-01-15 Release date: 2013-03-13 Last modified: 2023-02-01 Method: X-RAY DIFFRACTION (1.74 Å) Cite: Crystal structure of a hypothetical protein (BACOVA_03493) from Bacteroides ovatus ATCC 8483 at 1.74 A resolution To be published
3DX9	Crystal Structure of the DM1 TCR at 2.75A Descriptor: DM1 T cell receptor alpha chain, DM1 T cell receptor beta chain Authors: Archbold, J.K, Macdonald, W.A, Gras, S, Rossjohn, J. Deposit date: 2008-07-24 Release date: 2009-01-27 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (2.75 Å) Cite: Natural micropolymorphism in human leukocyte antigens provides a basis for genetic control of antigen recognition. J.Exp.Med., 206, 2009

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