PDB: 9760 resultsInfo pagesStatus searchChemie searchBIRD

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1FPN	HUMAN RHINOVIRUS SEROTYPE 2 (HRV2) Descriptor: COAT PROTEIN VP1, COAT PROTEIN VP2, COAT PROTEIN VP3, ... Authors: Verdaguer, N, Blaas, D, Fita, I. Deposit date: 2000-08-31 Release date: 2000-09-20 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Structure of human rhinovirus serotype 2 (HRV2). J.Mol.Biol., 300, 2000
1IGA	MODEL OF HUMAN IGA1 DETERMINED BY SOLUTION SCATTERING CURVE-FITTING AND HOMOLOGY MODELLING Descriptor: IGA1 Authors: Boehm, M.K, Woof, J.M, Kerr, M.A, Perkins, S.J. Deposit date: 1998-12-23 Release date: 1999-06-15 Last modified: 2024-02-07 Method: SOLUTION SCATTERING Cite: The Fab and Fc fragments of IgA1 exhibit a different arrangement from that in IgG: a study by X-ray and neutron solution scattering and homology modelling. J.Mol.Biol., 286, 1999
6STJ	Selective Affimers Recognize BCL-2 Family Proteins Through Non-Canonical Structural Motifs Descriptor: Cystatin domain-containing protein, Induced myeloid leukemia cell differentiation protein Mcl-1 Authors: Hobor, F, Miles, J.A, Trinh, C.H, Taylor, J, Tiede, C, Rowell, P.R, Jackson, B, Nadat, F, Kyle, H.F, Wicky, B.I.M, Clarke, J, Tomlinson, D.C, Wilson, A.J, Edwards, T.A. Deposit date: 2019-09-10 Release date: 2020-09-30 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Selective Affimers Recognise the BCL-2 Family Proteins BCL-x L and MCL-1 through Noncanonical Structural Motifs*. Chembiochem, 22, 2021
6WZO	Structure of SARS-CoV-2 Nucleocapsid dimerization domain, P1 form Descriptor: Nucleoprotein Authors: Ye, Q, Corbett, K.D. Deposit date: 2020-05-14 Release date: 2020-05-27 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.42 Å) Cite: Architecture and self-assembly of the SARS-CoV-2 nucleocapsid protein. Protein Sci., 29, 2020
6WZQ	Structure of SARS-CoV-2 Nucleocapsid dimerization domain, P21 form Descriptor: Nucleoprotein, SULFATE ION Authors: Ye, Q, Corbett, K.D. Deposit date: 2020-05-14 Release date: 2020-05-27 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.45 Å) Cite: Architecture and self-assembly of the SARS-CoV-2 nucleocapsid protein. Protein Sci., 29, 2020
4KA2	Crystal structure of CD4-mimetic miniprotein M48U12 in complex with HIV-1 YU2 gp120 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, HIV-1 YU2 gp120, M48U12 Authors: Acharya, P, Kwong, P.D. Deposit date: 2013-04-21 Release date: 2013-06-19 Last modified: 2023-11-15 Method: X-RAY DIFFRACTION (1.79 Å) Cite: Interfacial Cavity Filling To Optimize CD4-Mimetic Miniprotein Interactions with HIV-1 Surface Glycoprotein. J.Med.Chem., 56, 2013
6X83	Crystal Structure of TNFalpha with fragment compound 6 Descriptor: 1-benzyl-1H-benzimidazole, Tumor necrosis factor Authors: Longenecker, K.L, Stoll, V.S. Deposit date: 2020-06-01 Release date: 2021-01-13 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.83 Å) Cite: Development of Orally Efficacious Allosteric Inhibitors of TNF alpha via Fragment-Based Drug Design. J.Med.Chem., 64, 2021
6XM0	Consensus structure of SARS-CoV-2 spike at pH 5.5 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein Authors: Zhou, T, Tsybovsky, Y, Olia, A, Kwong, P.D. Deposit date: 2020-06-29 Release date: 2020-08-12 Last modified: 2021-12-15 Method: ELECTRON MICROSCOPY (2.7 Å) Cite: Cryo-EM Structures of SARS-CoV-2 Spike without and with ACE2 Reveal a pH-Dependent Switch to Mediate Endosomal Positioning of Receptor-Binding Domains. Cell Host Microbe, 28, 2020
6X82	Crystal Structure of TNFalpha with isoquinoline compound 4 Descriptor: 8-[4-(2-{5-[(4-methylpiperazin-1-yl)methyl]-2-(1H-pyrrolo[3,2-c]pyridin-3-yl)phenoxy}ethyl)phenyl]isoquinoline, Tumor necrosis factor Authors: Longenecker, K.L, Stoll, V.S. Deposit date: 2020-06-01 Release date: 2021-01-13 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.75 Å) Cite: Development of Orally Efficacious Allosteric Inhibitors of TNF alpha via Fragment-Based Drug Design. J.Med.Chem., 64, 2021
6X86	Crystal Structure of TNFalpha with indolinone compound 11 Descriptor: 3-[(6-{2-[(3R)-4-(hydroxyacetyl)-3-methylpiperazin-1-yl]pyrimidin-5-yl}-2,2-dimethyl-3-oxo-2,3-dihydro-1H-indol-1-yl)methyl]pyridine-2-carbonitrile, Tumor necrosis factor Authors: Longenecker, K.L, Stoll, V.S. Deposit date: 2020-06-01 Release date: 2021-01-13 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.93 Å) Cite: Development of Orally Efficacious Allosteric Inhibitors of TNF alpha via Fragment-Based Drug Design. J.Med.Chem., 64, 2021
6XLU	Structure of SARS-CoV-2 spike at pH 4.0 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein Authors: Zhou, T, Tsybovsky, Y, Olia, A, Kwong, P.D. Deposit date: 2020-06-29 Release date: 2020-08-12 Last modified: 2021-12-15 Method: ELECTRON MICROSCOPY (2.4 Å) Cite: Cryo-EM Structures of SARS-CoV-2 Spike without and with ACE2 Reveal a pH-Dependent Switch to Mediate Endosomal Positioning of Receptor-Binding Domains. Cell Host Microbe, 28, 2020
6X81	Crystal Structure of TNFalpha with isoquinoline compound 2 Descriptor: Tumor necrosis factor, [4-(isoquinolin-8-yl)phenyl]acetonitrile Authors: Longenecker, K.L, Stoll, V.S. Deposit date: 2020-06-01 Release date: 2021-01-13 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.81 Å) Cite: Development of Orally Efficacious Allosteric Inhibitors of TNF alpha via Fragment-Based Drug Design. J.Med.Chem., 64, 2021
6XM3	Structure of SARS-CoV-2 spike at pH 5.5, single RBD up, conformation 1 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein Authors: Zhou, T, Tsybovsky, Y, Olia, A, Kwong, P.D. Deposit date: 2020-06-29 Release date: 2020-08-12 Last modified: 2021-12-15 Method: ELECTRON MICROSCOPY (2.9 Å) Cite: Cryo-EM Structures of SARS-CoV-2 Spike without and with ACE2 Reveal a pH-Dependent Switch to Mediate Endosomal Positioning of Receptor-Binding Domains. Cell Host Microbe, 28, 2020
6X85	Crystal Structure of TNFalpha with indolinone compound 9 Descriptor: 1-{[2-(difluoromethoxy)phenyl]methyl}-2,2-dimethyl-1,2-dihydro-3H-indol-3-one, Tumor necrosis factor Authors: Longenecker, K.L, Stoll, V.S. Deposit date: 2020-06-01 Release date: 2021-01-13 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.85 Å) Cite: Development of Orally Efficacious Allosteric Inhibitors of TNF alpha via Fragment-Based Drug Design. J.Med.Chem., 64, 2021
6UE7	Structure of dimeric sIgA complex Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Immunoglobulin J chain, ... Authors: Kumar, N, Arthur, C.P, Ciferri, C, Matsumoto, M.L. Deposit date: 2019-09-20 Release date: 2020-02-19 Last modified: 2020-07-29 Method: ELECTRON MICROSCOPY (2.9 Å) Cite: Structure of the secretory immunoglobulin A core. Science, 367, 2020
6UEA	Structure of pentameric sIgA complex Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Immunoglobulin J chain, ... Authors: Kumar, N, Arthur, C.P, Ciferri, C, Matsumoto, M.L. Deposit date: 2019-09-20 Release date: 2020-02-19 Last modified: 2020-07-29 Method: ELECTRON MICROSCOPY (3 Å) Cite: Structure of the secretory immunoglobulin A core. Science, 367, 2020
4KFZ	Crystal structure of LMO2 and anti-LMO2 VH complex Descriptor: Anti-LMO2 VH, LMO-2, ZINC ION Authors: Sewell, H, Tanaka, T, El Omari, K, Cruz-Migoni, A, Mancini, E.J, Fuentes-Fernandez, N, Chambers, J, Rabbitts, T.H. Deposit date: 2013-04-28 Release date: 2014-01-22 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Conformational flexibility of the oncogenic protein LMO2 primes the formation of the multi-protein transcription complex. Sci Rep, 4, 2014
6XJY	Crystal structure of a self-alkylating ribozyme - short time incubation with the epoxide substrate Descriptor: Fab HAVx Heavy Chain, Fab HAVx Light Chain, Self-alkylating ribozyme (58-MER) Authors: Koirala, D, Piccirilli, J.A. Deposit date: 2020-06-24 Release date: 2022-01-19 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.156 Å) Cite: Structural basis for substrate binding and catalysis by a self-alkylating ribozyme. Nat.Chem.Biol., 18, 2022
6XJQ	Crystal structure of a self-alkylating ribozyme - alkylated form with biotinylated epoxide substrate Descriptor: 2-{[(4R)-4-hydroxyhexyl]oxy}ethyl 5-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanoate, Fab HAVx Heavy Chain, Fab HAVx Light Chain, ... Authors: Koirala, D, Piccirilli, J.A. Deposit date: 2020-06-24 Release date: 2022-01-19 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.708 Å) Cite: Structural basis for substrate binding and catalysis by a self-alkylating ribozyme. Nat.Chem.Biol., 18, 2022
6XJZ	Crystal structure of a self-alkylating ribozyme - apo form Descriptor: Fab HAVx Heavy Chain, Fab HAVx Light Chain, Self-alkylating ribozyme (58-MER) Authors: Koirala, D, Piccirilli, J.A. Deposit date: 2020-06-24 Release date: 2022-01-19 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.488 Å) Cite: Structural basis for substrate binding and catalysis by a self-alkylating ribozyme. Nat.Chem.Biol., 18, 2022
6XJW	Crystal structure of a self-alkylating ribozyme - alkylated form without biotin moiety Descriptor: 2-{[(4R)-4-hydroxyhexyl]oxy}ethyl pentanoate, Fab HAVx Heavy Chain, Fab HAVx Light Chain, ... Authors: Koirala, D, Piccirilli, J.A. Deposit date: 2020-06-24 Release date: 2022-01-19 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.918 Å) Cite: Structural basis for substrate binding and catalysis by a self-alkylating ribozyme. Nat.Chem.Biol., 18, 2022
6UE8	Structure of tetrameric sIgA complex (Class 1) Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Immunoglobulin J chain, ... Authors: Kumar, N, Arthur, C.P, Ciferri, C, Matsumoto, M.L. Deposit date: 2019-09-20 Release date: 2020-02-19 Last modified: 2020-07-29 Method: ELECTRON MICROSCOPY (3 Å) Cite: Structure of the secretory immunoglobulin A core. Science, 367, 2020
6UE9	Structure of tetrameric sIgA complex (Class 2) Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Immunoglobulin J chain, ... Authors: Kumar, N, Arthur, C.P, Ciferri, C, Matsumoto, M.L. Deposit date: 2019-09-20 Release date: 2020-02-19 Last modified: 2020-07-29 Method: ELECTRON MICROSCOPY (2.9 Å) Cite: Structure of the secretory immunoglobulin A core. Science, 367, 2020
6XM5	Structure of SARS-CoV-2 spike at pH 5.5, all RBDs down Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein Authors: Zhou, T, Tsybovsky, Y, Olia, A, Kwong, P.D. Deposit date: 2020-06-29 Release date: 2020-07-29 Last modified: 2021-12-15 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Cryo-EM Structures of SARS-CoV-2 Spike without and with ACE2 Reveal a pH-Dependent Switch to Mediate Endosomal Positioning of Receptor-Binding Domains. Cell Host Microbe, 28, 2020
6XM4	Structure of SARS-CoV-2 spike at pH 5.5, single RBD up, conformation 2 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein Authors: Zhou, T, Tsybovsky, Y, Olia, A, Kwong, P.D. Deposit date: 2020-06-29 Release date: 2020-08-12 Last modified: 2021-12-15 Method: ELECTRON MICROSCOPY (2.9 Å) Cite: Cryo-EM Structures of SARS-CoV-2 Spike without and with ACE2 Reveal a pH-Dependent Switch to Mediate Endosomal Positioning of Receptor-Binding Domains. Cell Host Microbe, 28, 2020

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