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5ZBY
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BU of 5zby by Molmil
Crystal structure of a [NiFe] hydrogenase maturation protease HycI from Thermococcus kodakarensis KOD1
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Hydrogenase maturation protease HycI
Authors:Kwon, S, Nishitani, Y, Miki, K.
Deposit date:2018-02-13
Release date:2018-03-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.591 Å)
Cite:Structure of a [NiFe] hydrogenase maturation protease HycI provides insights into its substrate selectivity
Biochem. Biophys. Res. Commun., 498, 2018
5ZNK
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BU of 5znk by Molmil
Crystal structure of a bacterial ProRS with ligands
Descriptor: 7-chloro-6-fluoro-3-{2-oxo-3-[(2S)-piperidin-2-yl]propyl}quinazolin-4(3H)-one, GLYCEROL, MAGNESIUM ION, ...
Authors:Cheng, B, Yu, Y, Zhou, H.
Deposit date:2018-04-09
Release date:2019-05-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Structure-Guided Design of Halofuginone Derivatives as ATP-Aided Inhibitors Against Bacterial Prolyl-tRNA Synthetase.
J.Med.Chem., 65, 2022
6U9M
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BU of 6u9m by Molmil
MLL1 SET N3861I/Q3867L bound to inhibitor 16 (TC-5109)
Descriptor: 5'-{[(3S)-3-amino-3-carboxypropyl]({1-[(thiophen-2-yl)methyl]azetidin-3-yl}methyl)amino}-5'-deoxyadenosine, GLYCEROL, Histone-lysine N-methyltransferase, ...
Authors:Petrunak, E.M, Stuckey, J.A.
Deposit date:2019-09-09
Release date:2020-07-01
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Discovery of Potent Small-Molecule Inhibitors of MLL Methyltransferase.
Acs Med.Chem.Lett., 11, 2020
5IN1
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BU of 5in1 by Molmil
Crystal Structure of the MRG701 chromodomain
Descriptor: 1,2-ETHANEDIOL, MRG701, SULFATE ION
Authors:Huang, Y, Liu, Y.
Deposit date:2016-03-07
Release date:2017-03-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural studies on MRG701 chromodomain reveal a novel dimerization interface of MRG proteins in green plants
Protein Cell, 7, 2016
5I3Q
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BU of 5i3q by Molmil
DENGUE SEROTYPE 3 RNA-DEPENDENT RNA POLYMERASE BOUND TO COMPOUND 29
Descriptor: 5-[5-(3-hydroxyprop-1-yn-1-yl)thiophen-2-yl]-4-methoxy-2-methyl-N-[(quinolin-8-yl)sulfonyl]benzamide, Genome polyprotein, ZINC ION
Authors:Noble, C.G.
Deposit date:2016-02-10
Release date:2016-07-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Potent Allosteric Dengue Virus NS5 Polymerase Inhibitors: Mechanism of Action and Resistance Profiling
Plos Pathog., 12, 2016
5I2R
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BU of 5i2r by Molmil
CRYSTAL STRUCTURE OF HUMAN PHOSPHODIESTERASE 10 IN COMPLEX WITH C2(=NN(c1cccc(c1)OC(F)(F)F)C=CC2=O)c3ccnn3c4ccccc4, micromolar IC50=0.019462
Descriptor: 3-(1-phenyl-1H-pyrazol-5-yl)-1-[3-(trifluoromethoxy)phenyl]pyridazin-4(1H)-one, MAGNESIUM ION, ZINC ION, ...
Authors:Joseph, C, Koerner, M, Rudolph, M.G.
Deposit date:2016-02-09
Release date:2016-03-09
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A Real-World Perspective on Molecular Design.
J.Med.Chem., 59, 2016
5I60
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BU of 5i60 by Molmil
X-RAY CRYSTAL STRUCTURE AT 2.12A RESOLUTION OF HUMAN MITOCHONDRIAL BRANCHED CHAIN AMINOTRANSFERASE (BCATM) COMPLEXED WITH A BIARL AMIDE COMPOUND AND AN INTERNAL ALDIMINE LINKED PLP COFACTOR.
Descriptor: (2-{[4-(1H-pyrazol-3-yl)phenyl]carbamoyl}phenyl)acetic acid, 1,2-ETHANEDIOL, Branched-chain-amino-acid aminotransferase, ...
Authors:Somers, D.O.
Deposit date:2016-02-15
Release date:2016-03-23
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Structurally Diverse Mitochondrial Branched Chain Aminotransferase (BCATm) Leads with Varying Binding Modes Identified by Fragment Screening.
J.Med.Chem., 59, 2016
6U81
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BU of 6u81 by Molmil
Crystal Structure of the Double Homeodomain of DUX4 in Complex with a DNA aptamer
Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(*GP*CP*GP*TP*AP*AP*TP*CP*TP*AP*AP*TP*CP*AP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*TP*GP*AP*TP*TP*AP*GP*CP*CP*CP*AP*TP*TP*AP*CP*GP*C)-3'), ...
Authors:Shi, K, Aihara, H.
Deposit date:2019-09-04
Release date:2020-02-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:DNA aptamers against the DUX4 protein reveal novel therapeutic implications for FSHD.
Faseb J., 34, 2020
5IEO
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BU of 5ieo by Molmil
Structure of CDL2.3a, a computationally designed Vitamin-D3 binder
Descriptor: 1,2-ETHANEDIOL, 3-{2-[1-(5-HYDROXY-1,5-DIMETHYL-HEXYL)-7A-METHYL-OCTAHYDRO-INDEN-4-YLIDENE]-ETHYLIDENE}-4-METHYLENE-CYCLOHEXANOL, CDL2.3a
Authors:Stoddard, B.L, Doyle, L.A.
Deposit date:2016-02-25
Release date:2017-03-01
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.851 Å)
Cite:Unintended specificity of an engineered ligand-binding protein facilitated by unpredicted plasticity of the protein fold.
Protein Eng.Des.Sel., 31, 2018
6CH1
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BU of 6ch1 by Molmil
Crystal structure of the cytoplasmic domain of FlhA in monomeric form
Descriptor: 1,2-ETHANEDIOL, Flagellar biosynthesis protein FlhA
Authors:Xing, Q, Shi, K, Kalodimos, C.G.
Deposit date:2018-02-21
Release date:2018-05-16
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures of chaperone-substrate complexes docked onto the export gate in a type III secretion system.
Nat Commun, 9, 2018
4ZW1
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BU of 4zw1 by Molmil
Crystal structure of hBRD4 in complex with BL-BI06 reveals a novel synthesized inhibitor that induces Beclin1-independent/ATG5-dependent autophagic cell death in breast cancer
Descriptor: 1,2-ETHANEDIOL, 2-(4-hydroxy-3,5-dimethylphenyl)-7-methyl-5,6,7,8-tetrahydropyrido[4',3':4,5]thieno[2,3-d]pyrimidin-4(3H)-one, Bromodomain-containing protein 4
Authors:Liu, B, Zhang, S, Guo, M, Tian, M.
Deposit date:2015-05-19
Release date:2016-06-22
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of hBRD4 in complex with BL-BI06 reveals a novel synthesized inhibitor that induces Beclin1-independent/ATG5-dependent autophagic cell death in breast cancer
To Be Published
5VYZ
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BU of 5vyz by Molmil
Crystal structure of Lactococcus lactis pyruvate carboxylase in complex with cyclic-di-AMP
Descriptor: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Choi, P.H, Tong, L.
Deposit date:2017-05-26
Release date:2017-08-16
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and functional studies of pyruvate carboxylase regulation by cyclic di-AMP in lactic acid bacteria.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
1AQZ
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BU of 1aqz by Molmil
CRYSTAL STRUCTURE OF A HIGHLY SPECIFIC ASPERGILLUS RIBOTOXIN, RESTRICTOCIN
Descriptor: PHOSPHATE ION, RESTRICTOCIN
Authors:Yang, X, Moffat, K.
Deposit date:1997-08-04
Release date:1997-11-12
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Insights into specificity of cleavage and mechanism of cell entry from the crystal structure of the highly specific Aspergillus ribotoxin, restrictocin.
Structure, 4, 1996
5UXW
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BU of 5uxw by Molmil
Crystal Structure of Anti-anti-sigma factor PhyR from Bartonella quintana
Descriptor: 1,2-ETHANEDIOL, Sensory transduction regulatory protein
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2017-02-23
Release date:2018-02-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of Anti-anti-sigma factor PhyR from Bartonella quintana
to be published
5VVW
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BU of 5vvw by Molmil
Structure of MurC from Pseudomonas aeruginosa
Descriptor: 1,2-ETHANEDIOL, UDP-N-acetylmuramate--L-alanine ligase
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2017-05-21
Release date:2017-05-31
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of MurC from Pseudomonas aeruginosa
To Be Published
4ZVF
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BU of 4zvf by Molmil
Crystal structure of GGDEF domain of the E. coli DosC - form II (GTP-alpha-S-bound)
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Diguanylate cyclase DosC, ...
Authors:Tarnawski, M, Barends, T.R.M, Schlichting, I.
Deposit date:2015-05-18
Release date:2015-11-11
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Structural analysis of an oxygen-regulated diguanylate cyclase.
Acta Crystallogr.,Sect.D, 71, 2015
3HRH
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BU of 3hrh by Molmil
Crystal Structure of Antigen 85C and Glycerol
Descriptor: Antigen 85-C, GLYCEROL
Authors:Boucau, J, Sanki, A.K, Umesiri, F.E, Sucheck, S.J, Ronning, D.R.
Deposit date:2009-06-09
Release date:2009-09-29
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Design, synthesis and biological evaluation of sugar-derived esters, alpha-ketoesters and alpha-ketoamides as inhibitors for Mycobacterium tuberculosis antigen 85C.
Mol Biosyst, 5, 2009
6UOM
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BU of 6uom by Molmil
Y271G DNA polymerase beta ternary complex with templating adenine and incoming r8-oxo-GTP
Descriptor: 1,2-ETHANEDIOL, 2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE, 8-OXO-GUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Smith, M.R, Freudenthal, B.D.
Deposit date:2019-10-15
Release date:2020-01-08
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Molecular and structural characterization of oxidized ribonucleotide insertion into DNA by human DNA polymerase beta.
J.Biol.Chem., 295, 2020
7NCL
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BU of 7ncl by Molmil
Glutathione-S-transferase GliG mutant E82Q
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Glutathione S-transferase GliG
Authors:Groll, M, Huber, E.M.
Deposit date:2021-01-29
Release date:2021-05-12
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and Mechanistic Insights into C-S Bond Formation in Gliotoxin.
Angew.Chem.Int.Ed.Engl., 60, 2021
5B4C
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BU of 5b4c by Molmil
Crystal structure of H10N mutant of LpxH with manganese
Descriptor: GLYCEROL, MANGANESE (II) ION, UDP-2,3-diacylglucosamine hydrolase
Authors:Okada, C, Wakabayashi, H, Yao, M, Tanaka, I.
Deposit date:2016-04-03
Release date:2016-09-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Crystal structures of the UDP-diacylglucosamine pyrophosphohydrase LpxH from Pseudomonas aeruginosa
Sci Rep, 6, 2016
7NCO
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BU of 7nco by Molmil
Glutathione-S-transferase GliG mutant K127R
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Glutathione S-transferase GliG
Authors:Groll, M, Huber, E.M.
Deposit date:2021-01-29
Release date:2021-05-12
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural and Mechanistic Insights into C-S Bond Formation in Gliotoxin.
Angew.Chem.Int.Ed.Engl., 60, 2021
7NCP
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BU of 7ncp by Molmil
Glutathione-S-transferase GliG mutant K127A
Descriptor: 1,2-ETHANEDIOL, Glutathione S-transferase GliG, SODIUM ION
Authors:Groll, M, Huber, E.M.
Deposit date:2021-01-29
Release date:2021-05-12
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural and Mechanistic Insights into C-S Bond Formation in Gliotoxin.
Angew.Chem.Int.Ed.Engl., 60, 2021
6CNZ
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BU of 6cnz by Molmil
Crystal Structure of Chorismate Mutase from Burkholderia thailandensis
Descriptor: 1,2-ETHANEDIOL, Chorismate mutase, NITRATE ION
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2018-03-09
Release date:2018-03-21
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of chorismate mutase from Burkholderia thailandensis.
Acta Crystallogr F Struct Biol Commun, 74, 2018
1B63
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BU of 1b63 by Molmil
MUTL COMPLEXED WITH ADPNP
Descriptor: 1,2-ETHANEDIOL, MAGNESIUM ION, MUTL, ...
Authors:Yang, W.
Deposit date:1999-01-20
Release date:1999-06-08
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Transformation of MutL by ATP binding and hydrolysis: a switch in DNA mismatch repair.
Cell(Cambridge,Mass.), 97, 1999
3J1W
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BU of 3j1w by Molmil
A refined model of the prototypical Salmonella typhimurium T3SS basal body reveals the molecular basis for its assembly
Descriptor: Protein PrgH
Authors:Sgourakis, N.G, Worrall, L.J, Strynadka, N.C.J, Baker, D.
Deposit date:2012-07-10
Release date:2013-05-22
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (11.7 Å)
Cite:A Refined Model of the Prototypical Salmonella SPI-1 T3SS Basal Body Reveals the Molecular Basis for Its Assembly.
Plos Pathog., 9, 2013

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