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2IN2	NMR Structure of the Apo Human Rhinovirus 3C Protease (serotype 14) Descriptor: Picornain 3C Authors: Bjorndahl, T.C, Semenchenko, V, Wishart, D.S. Deposit date: 2006-10-05 Release date: 2006-10-24 Last modified: 2024-05-08 Method: SOLUTION NMR Cite: NMR solution structures of the apo and peptide-inhibited human rhinovirus 3C protease (Serotype 14): structural and dynamic comparison. Biochemistry, 46, 2007
8C42	Ternary structure of 14-3-3sigma, PKA-responsive ERa phosphopeptide and Fusicoccin-A Descriptor: 14-3-3 protein sigma, De-acetylated Fusicoccin, Estrogen receptor, ... Authors: Somsen, B.A, Ottmann, C. Deposit date: 2022-12-30 Release date: 2023-12-27 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Molecular basis and dual ligand regulation of tetrameric estrogen receptor alpha /14-3-3 zeta protein complex. J.Biol.Chem., 299, 2023
3LES	2F5 Epitope scaffold ES2 Descriptor: RNA polymerase sigma factor, SULFATE ION Authors: Ofek, G, Guenaga, F.J, Schief, W.R, Skinner, J, Wyatt, R, Baker, D, Kwong, P.D. Deposit date: 2010-01-15 Release date: 2010-09-29 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.77 Å) Cite: Elicitation of structure-specific antibodies by epitope scaffolds. Proc.Natl.Acad.Sci.USA, 107, 2010
4TQS	Ternary complex of Y-family DNA polymerase Dpo4 with (5'S)-8,5'-Cyclo-2'-deoxyguanosine and dCTP Descriptor: 2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE, 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, DNA (5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*T)-3'), ... Authors: Zhao, L. Deposit date: 2014-06-11 Release date: 2015-01-14 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (2.06 Å) Cite: Kinetic and Structural Mechanisms of (5'S)-8,5'-Cyclo-2'-deoxyguanosine-Induced DNA Replication Stalling. Biochemistry, 54, 2015
4TQR	Ternary complex of Y-family DNA polymerase Dpo4 with (5'S)-8,5'-Cyclo-2'-deoxyguanosine and dTTP Descriptor: 2',3'-DIDEOXYCYTIDINE-5'-MONOPHOSPHATE, CALCIUM ION, DNA (5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*T)-3'), ... Authors: Zhao, L. Deposit date: 2014-06-11 Release date: 2015-01-14 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (1.58 Å) Cite: Kinetic and Structural Mechanisms of (5'S)-8,5'-Cyclo-2'-deoxyguanosine-Induced DNA Replication Stalling. Biochemistry, 54, 2015
3FM7	Quaternary Structure of Drosophila melanogaster IC/Tctex-1/LC8; Allosteric Interactions of Dynein Light Chains with Dynein Intermediate Chain Descriptor: Dynein intermediate chain, cytosolic, Dynein light chain 1, ... Authors: Hall, J.D, Karplus, P.A, Barbar, E.J. Deposit date: 2008-12-19 Release date: 2009-09-15 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (3.5 Å) Cite: Multivalency in the assembly of intrinsically disordered Dynein intermediate chain. J.Biol.Chem., 284, 2009
3GLW	Quaternary Structure of Drosophila melanogaster IC/Tctex-1/LC8; Allosteric Interactions of Dynein Light Chains with Dynein Intermediate Chain Descriptor: Dynein intermediate Chain, Dynein light chain 1, cytoplasmic Authors: Hall, J.D, Karplus, P.A, Barbar, E.J. Deposit date: 2009-03-12 Release date: 2009-09-15 Last modified: 2011-07-13 Method: X-RAY DIFFRACTION (3.15 Å) Cite: Multivalency in the assembly of intrinsically disordered Dynein intermediate chain. J.Biol.Chem., 284, 2009
2K6X	Autoregulation of a Group 1 Bacterial Sigma Factor Involves the Formation of a Region 1.1- Induced Compacted Structure Descriptor: RNA polymerase sigma factor rpoD Authors: Schwartz, E.C, Shekhtman, A, Dutta, K, Pratt, M.R, Cowburn, D, Darst, S, Muir, T.W. Deposit date: 2008-07-28 Release date: 2008-10-28 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: Autoregulation of a Group 1 Bacterial Sigma Factor Involves the Formation of a Region 1.1 - Induced Compacted Structure Chem.Biol., 15, 2008
8B2I	Ternary structure of 14-3-3s, ERRg phosphopeptide and dual-reactive compound 4 Descriptor: 14-3-3 protein sigma, 4-methanoyl-~{N}-methyl-~{N}-(2-sulfanylethyl)benzamide, CHLORIDE ION, ... Authors: Somsen, B.A, Ottmann, C. Deposit date: 2022-09-14 Release date: 2023-03-29 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Reversible Dual-Covalent Molecular Locking of the 14-3-3/ERR gamma Protein-Protein Interaction as a Molecular Glue Drug Discovery Approach. J.Am.Chem.Soc., 145, 2023
8B2K	Ternary structure of 14-3-3s, RND3 phosphopeptide and dual-reactive compound 10 Descriptor: 14-3-3 protein sigma, 3-bromanyl-5-methanoyl-~{N}-methyl-~{N}-(2-sulfanylethyl)benzamide, CHLORIDE ION, ... Authors: Somsen, B.A, Ottmann, C. Deposit date: 2022-09-14 Release date: 2023-03-29 Last modified: 2024-02-07 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Reversible Dual-Covalent Molecular Locking of the 14-3-3/ERR gamma Protein-Protein Interaction as a Molecular Glue Drug Discovery Approach. J.Am.Chem.Soc., 145, 2023
1Y5O	NMR structure of the amino-terminal domain from the Tfb1 subunit of yeast TFIIH Descriptor: RNA polymerase II transcription factor B 73 kDa subunit Authors: Di Lello, P, Nguyen, B.D, Jones, T.N, Potempa, K, Kobor, M.S, Legault, P, Omichinski, J.G. Deposit date: 2004-12-02 Release date: 2005-05-17 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: NMR Structure of the Amino-Terminal Domain from the Tfb1 Subunit of TFIIH and Characterization of Its Phosphoinositide and VP16 Binding Sites Biochemistry, 44, 2005
2MT3	Structure of -24 DNA binding domain of sigma 54 from E.coli Descriptor: RNA polymerase sigma-54 factor Authors: Wemmer, D, Gao, Z, Pelton, J. Deposit date: 2014-08-12 Release date: 2015-08-26 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Structure of -24 DNA binding domain of sigma 54 from E.coli To be Published
2BYM	Histone fold heterodimer of the Chromatin Accessibility Complex Descriptor: CADMIUM ION, CHRAC-14, CHRAC-16 Authors: Fernandez-Tornero, C, Hartlepp, K.F, Grune, T, Eberharter, A, Becker, P.B, Muller, C.W. Deposit date: 2005-08-03 Release date: 2005-11-09 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (2.8 Å) Cite: The Histone Fold Subunits of Drosophila Chrac Facilitate Nucleosome Sliding Through Dynamic DNA Interactions. Mol.Cell.Biol., 25, 2005
2BYK	Histone fold heterodimer of the Chromatin Accessibility Complex Descriptor: CHRAC-14, CHRAC-16, SULFATE ION Authors: Fernandez-Tornero, C, Hartlepp, K.F, Grune, T, Eberharter, A, Becker, P.B, Muller, C.W. Deposit date: 2005-08-03 Release date: 2005-11-09 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (2.4 Å) Cite: The Histone Fold Subunits of Drosophila Chrac Facilitate Nucleosome Sliding Through Dynamic DNA Interactions. Mol.Cell.Biol., 25, 2005
2FQM	Crystal structure of the oligomerization domain of the phosphoprotein of vesicular stomatitis virus Descriptor: Phosphoprotein Authors: Ding, H, Green, T.J, Lu, S, Luo, M. Deposit date: 2006-01-18 Release date: 2006-02-07 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Crystal structure of the oligomerization domain of the phosphoprotein of vesicular stomatitis virus J.Virol., 80, 2006
6QX9	Structure of a human fully-assembled precatalytic spliceosome (pre-B complex). Descriptor: 116 kDa U5 small nuclear ribonucleoprotein component, AdML pre-mRNA, GUANOSINE-5'-TRIPHOSPHATE, ... Authors: Charenton, C, Wilkinson, M.E, Nagai, K. Deposit date: 2019-03-07 Release date: 2019-04-17 Last modified: 2020-10-07 Method: ELECTRON MICROSCOPY (3.28 Å) Cite: Mechanism of 5' splice site transfer for human spliceosome activation. Science, 364, 2019
5L3T	Structure of the Saccharomyces cerevisiae TREX-2 complex Descriptor: 26S proteasome complex subunit SEM1, Nuclear mRNA export protein SAC3, Nuclear mRNA export protein THP1, ... Authors: Stewart, M, Aibara, S. Deposit date: 2016-05-24 Release date: 2016-07-27 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (4.927 Å) Cite: The Sac3 TPR-like region in the Saccharomyces cerevisiae TREX-2 complex is more extensive but independent of the CID region. J. Struct. Biol., 195, 2016
6QZP	High-resolution cryo-EM structure of the human 80S ribosome Descriptor: (3beta)-O~3~-[(2R)-2,6-dihydroxy-2-(2-methoxy-2-oxoethyl)-6-methylheptanoyl]cephalotaxine, 18S rRNA (1740-MER), 28S rRNA (3773-MER), ... Authors: Natchiar, S.K, Myasnikov, A.G, Kratzat, H, Hazemann, I, Klaholz, B.P. Deposit date: 2019-03-12 Release date: 2019-04-24 Last modified: 2024-04-24 Method: ELECTRON MICROSCOPY (2.9 Å) Cite: Visualization of chemical modifications in the human 80S ribosome structure. Nature, 551, 2017
6LQS	Cryo-EM structure of 90S small subunit preribosomes in transition states (State D) Descriptor: 13 kDa ribonucleoprotein-associated protein, 18S pre-rRNA, 40S ribosomal protein S1-A, ... Authors: Du, Y, Ye, K. Deposit date: 2020-01-14 Release date: 2020-09-16 Last modified: 2024-03-27 Method: ELECTRON MICROSCOPY (3.8 Å) Cite: Cryo-EM structure of 90 S small ribosomal subunit precursors in transition states. Science, 369, 2020
7R4X	Cryo-EM reconstruction of the human 40S ribosomal subunit - Full map Descriptor: 18S ribosomal RNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ... Authors: Pellegrino, S, Dent, K.C, Spikes, T, Warren, A.J. Deposit date: 2022-02-09 Release date: 2023-02-22 Last modified: 2024-04-24 Method: ELECTRON MICROSCOPY (2.15 Å) Cite: Cryo-EM reconstruction of the human 40S ribosomal subunit at 2.15 angstrom resolution. Nucleic Acids Res., 51, 2023
4V6X	Structure of the human 80S ribosome Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ... Authors: Anger, A.M, Armache, J.-P, Berninghausen, O, Habeck, M, Subklewe, M, Wilson, D.N, Beckmann, R. Deposit date: 2013-02-27 Release date: 2014-07-09 Last modified: 2023-02-01 Method: ELECTRON MICROSCOPY (5 Å) Cite: Structures of the human and Drosophila 80S ribosome. Nature, 497, 2013
5DZM	HIV-1 Reverse Transcriptase RH domain Descriptor: Ribonuclease H Authors: Pedersen, L.C, London, R.E, Gabel, S.A, Zheng, X.H. Deposit date: 2015-09-25 Release date: 2016-05-11 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (2.05 Å) Cite: Unfolding the HIV-1 reverse transcriptase RNase H domain - how to lose a molecular tug-of-war. Nucleic Acids Res., 44, 2016
3LK9	DNA polymerase beta with a gapped DNA substrate and dTMP(CF2)P(CF2)P Descriptor: 5'-O-[(R)-{[(R)-[difluoro(phosphono)methyl](hydroxy)phosphoryl](difluoro)methyl}(hydroxy)phosphoryl]thymidine, CHLORIDE ION, DNA (5'-D(*CP*CP*GP*AP*CP*AP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), ... Authors: Zibinsky, M, Surya Prakash, G.K, Upton, T.G, Kashemirov, B.A, McKenna, C.E, Oertell, K, Goodman, M.F, Batra, V.K, Pedersen, L.C, Beard, W.A, Wilson, S.H. Deposit date: 2010-01-27 Release date: 2011-01-12 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Synthesis and biological evaluation of fluorinated deoxynucleotide analogs based on bis-(difluoromethylene)triphosphoric acid. Proc.Natl.Acad.Sci.USA, 107, 2010
6O9L	Human holo-PIC in the closed state Descriptor: CDK-activating kinase assembly factor MAT1, Cyclin-H, Cyclin-dependent kinase 7, ... Authors: Yan, C.L, Dodd, T, He, Y, Tainer, J.A, Tsutakawa, S.E, Ivanov, I. Deposit date: 2019-03-14 Release date: 2019-05-29 Last modified: 2024-03-13 Method: ELECTRON MICROSCOPY (7.2 Å) Cite: Transcription preinitiation complex structure and dynamics provide insight into genetic diseases. Nat.Struct.Mol.Biol., 26, 2019
4OR5	Crystal structure of HIV-1 Tat complexed with human P-TEFb and AFF4 Descriptor: AF4/FMR2 family member 4, Cyclin-T1, Cyclin-dependent kinase 9, ... Authors: Gu, J, Babayeva, N.D, Suwa, Y, Baranovskiy, A.G, Price, D.H, Tahirov, T.H. Deposit date: 2014-02-10 Release date: 2014-04-16 Last modified: 2014-06-11 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Crystal structure of HIV-1 Tat complexed with human P-TEFb and AFF4. Cell Cycle, 13, 2014

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