Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1PRP
DownloadVisualize
BU of 1prp by Molmil
CRYSTAL STRUCTURE OF D(CGCGAATTCGCG) COMPLEXED WITH PROPAMIDINE, A SHORT-CHAIN HOMOLOGUE OF THE DRUG PENTAMIDIN
Descriptor: 1,3-BIS(AMIDINOPHENOXY)PROPANE, DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')
Authors:Nunn, C.M, Jenkins, T.C, Neidle, S.
Deposit date:1993-07-23
Release date:1994-01-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of d(CGCGAATTCGCG) complexed with propamidine, a short-chain homologue of the drug pentamidine.
Biochemistry, 32, 1993
1PJ3
DownloadVisualize
BU of 1pj3 by Molmil
Crystal structure of human mitochondrial NAD(P)+-dependent malic enzyme in a pentary complex with natural substrate pyruvate, cofactor NAD+, Mn++, and allosteric activator fumarate.
Descriptor: FUMARIC ACID, MANGANESE (II) ION, NAD-dependent malic enzyme, ...
Authors:Tao, X, Yang, Z, Tong, L.
Deposit date:2003-05-30
Release date:2003-11-11
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structures of substrate complexes of malic enzyme and insights into the catalytic mechanism.
Structure, 11, 2003
1RI1
DownloadVisualize
BU of 1ri1 by Molmil
Structure and mechanism of mRNA cap (guanine N-7) methyltransferase
Descriptor: 7-METHYL-GUANOSINE-5'-TRIPHOSPHATE-5'-GUANOSINE, S-ADENOSYL-L-HOMOCYSTEINE, mRNA CAPPING ENZYME
Authors:Fabrega, C, Hausmann, S, Shen, V, Shuman, S, Lima, C.D.
Deposit date:2003-11-16
Release date:2004-02-03
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure and mechanism of mRNA cap (Guanine-n7) methyltransferase
Mol.Cell, 13, 2004
1R22
DownloadVisualize
BU of 1r22 by Molmil
Crystal structure of the cyanobacterial metallothionein repressor SmtB (C14S/C61S/C121S mutant) in the Zn2alpha5-form
Descriptor: Transcriptional repressor smtB, ZINC ION
Authors:Eicken, C, Pennella, M.A, Chen, X, Koshlap, K.M, VanZile, M.L, Sacchettini, J.C, Giedroc, D.P.
Deposit date:2003-09-25
Release date:2004-05-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A metal-ligand-mediated intersubunit allosteric switch in related SmtB/ArsR zinc sensor proteins.
J.Mol.Biol., 333, 2003
1RGX
DownloadVisualize
BU of 1rgx by Molmil
Crystal Structure of resisitin
Descriptor: Resistin
Authors:Patel, S.D, Rajala, M.W, Scherer, P.E, Shapiro, L, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2003-11-13
Release date:2004-06-08
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.787 Å)
Cite:Disulfide-dependent multimeric assembly of resistin family hormones
Science, 304, 2004
2D98
DownloadVisualize
BU of 2d98 by Molmil
Structure of VIL (extra KI/I2 added)-xylanase
Descriptor: Endo-1,4-beta-xylanase 2, IODIDE ION
Authors:Miyatake, H, Hasegawa, T, Yamano, A.
Deposit date:2005-12-09
Release date:2006-07-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:New methods to prepare iodinated derivatives by vaporizing iodine labelling (VIL) and hydrogen peroxide VIL (HYPER-VIL)
ACTA CRYSTALLOGR.,SECT.D, 62, 2006
2D25
DownloadVisualize
BU of 2d25 by Molmil
C-C-A-G-G-C-M5C-T-G-G; HELICAL FINE STRUCTURE, HYDRATION, AND COMPARISON WITH C-C-A-G-G-C-C-T-G-G
Descriptor: DNA (5'-D(*CP*CP*AP*GP*GP*CP*(5CM)P*TP*GP*G)-3'), MAGNESIUM ION
Authors:Heinemann, U, Hahn, M.
Deposit date:1991-04-23
Release date:1991-04-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:C-C-A-G-G-C-m5C-T-G-G. Helical fine structure, hydration, and comparison with C-C-A-G-G-C-C-T-G-G.
J.Biol.Chem., 267, 1992
1R1U
DownloadVisualize
BU of 1r1u by Molmil
Crystal structure of the metal-sensing transcriptional repressor CzrA from Staphylococcus aureus in the apo-form
Descriptor: repressor protein
Authors:Eicken, C, Pennella, M.A, Chen, X, Koshlap, K.M, VanZile, M.L, Sacchettini, J.C, Giedroc, D.P.
Deposit date:2003-09-25
Release date:2004-05-18
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:A metal-ligand-mediated intersubunit allosteric switch in related SmtB/ArsR zinc sensor proteins.
J.Mol.Biol., 333, 2003
1R23
DownloadVisualize
BU of 1r23 by Molmil
Crystal structure of the cyanobacterial metallothionein repressor SmtB in the Zn1-form (one Zn(II) per dimer)
Descriptor: Transcriptional repressor smtB, ZINC ION
Authors:Eicken, C, Pennella, M.A, Chen, X, Koshlap, K.M, VanZile, M.L, Sacchettini, J.C, Giedroc, D.P.
Deposit date:2003-09-25
Release date:2004-05-18
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:A metal-ligand-mediated intersubunit allosteric switch in related SmtB/ArsR zinc sensor proteins.
J.Mol.Biol., 333, 2003
2AZT
DownloadVisualize
BU of 2azt by Molmil
Crystal structure of H176N mutant of human Glycine N-Methyltransferase
Descriptor: BETA-MERCAPTOETHANOL, CHLORIDE ION, CITRIC ACID, ...
Authors:Luka, Z, Pakhomova, S, Luka, Y, Newcomer, M.E, Wagner, C.
Deposit date:2005-09-12
Release date:2006-09-26
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Destabilization of human glycine N-methyltransferase by H176N mutation.
Protein Sci., 16, 2007
1NN6
DownloadVisualize
BU of 1nn6 by Molmil
Human Pro-Chymase
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Chymase
Authors:Reiling, K.K, Krucinski, J, Miercke, L.J.W, Raymond, W.W, Caughey, G.H, Stroud, R.M.
Deposit date:2003-01-12
Release date:2003-03-04
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure of human pro-chymase: a model for the activating transition of granule-associated proteases.
Biochemistry, 42, 2003
1NR8
DownloadVisualize
BU of 1nr8 by Molmil
The crystal structure of a D-Lysine-based chiral PNA-DNA duplex
Descriptor: 5'-D(P*AP*GP*TP*GP*AP*TP*CP*TP*AP*C)-3', H-((GPN)*(TPN)*(APN)*(GPN)*(A66)*(T66)*(C66)*(APN)*(CPN)*(TPN))-NH2, MAGNESIUM ION
Authors:Menchise, V, De Simone, G, Tedeschi, T, Corradini, R, Sforza, S, Marchelli, R, Capasso, D, Saviano, M, Pedone, C.
Deposit date:2003-01-24
Release date:2003-10-28
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Insights into peptide nucleic acid (PNA) structural features: The crystal structure of a D-lysine-based chiral PNA-DNA duplex
Proc.Natl.Acad.Sci.USA, 100, 2003
1NRK
DownloadVisualize
BU of 1nrk by Molmil
YGFZ PROTEIN
Descriptor: SULFATE ION, YGFZ Protein
Authors:Teplyakov, A, Obmolova, G, Gilliland, G.L, Structure 2 Function Project (S2F)
Deposit date:2003-01-24
Release date:2004-03-09
Last modified:2022-12-21
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of the YgfZ protein from Escherichia coli suggests a folate-dependent regulatory role in one-carbon metabolism.
J.Bacteriol., 186, 2004
2B4R
DownloadVisualize
BU of 2b4r by Molmil
Crystal structure of glyceraldehyde-3-phosphate dehydrogenase from Plasmodium falciparum at 2.25 Angstrom Resolution reveals intriguing extra electron density in the active site
Descriptor: 4-(2-AMINOETHYL)BENZENESULFONYL FLUORIDE, GLYCEROL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Robien, M.A, Bosch, J, Hol, W.G.J, Structural Genomics of Pathogenic Protozoa Consortium (SGPP)
Deposit date:2005-09-26
Release date:2005-10-04
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal structure of glyceraldehyde-3-phosphate dehydrogenase from Plasmodium falciparum at 2.25 A resolution reveals intriguing extra electron density in the active site
Proteins, 62, 2006
1RI4
DownloadVisualize
BU of 1ri4 by Molmil
Structure and mechanism of mRNA cap (guanine N-7) methyltransferase
Descriptor: S-ADENOSYLMETHIONINE, mRNA CAPPING ENZYME
Authors:Fabrega, C, Hausmann, S, Shen, V, Shuman, S, Lima, C.D.
Deposit date:2003-11-16
Release date:2004-02-03
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure and mechanism of mRNA cap (Guanine-n7) methyltransferase
Mol.Cell, 13, 2004
1NYB
DownloadVisualize
BU of 1nyb by Molmil
SOLUTION STRUCTURE OF THE BACTERIOPHAGE PHI21 N PEPTIDE-BOXB RNA COMPLEX
Descriptor: BoxB RNA, Probable regulatory protein N
Authors:Cilley, C.D, Williamson, J.R.
Deposit date:2003-02-12
Release date:2003-06-24
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural mimicry in the phage phi21 N peptide-boxB RNA complex
RNA, 9, 2003
1NUS
DownloadVisualize
BU of 1nus by Molmil
CRYSTAL STRUCTURE OF HUMAN CYTOSOLIC NMN/NaMN ADENYLYLTRANSFERASE COMPLEXED WITH ATP ANALOG AND NMN
Descriptor: BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, FKSG76, ...
Authors:Zhang, X, Kurnasov, O.V, Karthikeyan, S, Grishin, N.V, Osterman, A.L, Zhang, H.
Deposit date:2003-02-01
Release date:2003-06-03
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:STRUCTURAL CHARACTERIZATION OF A HUMAN CYTOSOLIC NMN/NaMN ADENYLYLTRANSFERASE AND IMPLICATION IN HUMAN NAD BIOSYNTHESIS
J.Biol.Chem., 278, 2003
2B3T
DownloadVisualize
BU of 2b3t by Molmil
Structure of complex between E. coli translation termination factor RF1 and the PrmC methyltransferase
Descriptor: Peptide chain release factor 1, Protein methyltransferase hemK, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Graille, M, Heurgue-Hamard, V, Champ, S, Mora, L, Scrima, N, Ulryck, N, van Tilbeurgh, H, Buckingham, R.H.
Deposit date:2005-09-21
Release date:2006-01-24
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Molecular basis for bacterial class I release factor methylation by PrmC
Mol.Cell, 20, 2005
1RI2
DownloadVisualize
BU of 1ri2 by Molmil
Structure and mechanism of mRNA cap (guanine N-7) methyltransferase
Descriptor: 7-METHYL-GUANOSINE-5'-TRIPHOSPHATE-5'-GUANOSINE, mRNA CAPPING ENZYME
Authors:Fabrega, C, Hausmann, S, Shen, V, Shuman, S, Lima, C.D.
Deposit date:2003-11-16
Release date:2004-02-03
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure and mechanism of mRNA cap (Guanine-n7) methyltransferase
Mol.Cell, 13, 2004
1NYD
DownloadVisualize
BU of 1nyd by Molmil
Solution structure of DNA quadruplex GCGGTGGAT
Descriptor: 5'-D(*GP*CP*GP*GP*TP*GP*GP*AP*T)-3'
Authors:Webba da Silva, M.
Deposit date:2003-02-12
Release date:2004-02-24
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Association of DNA quadruplexes through G:C:G:C tetrads. Solution structure of d(GCGGTGGAT).
Biochemistry, 42, 2003
2B8F
DownloadVisualize
BU of 2b8f by Molmil
solution structure of Bacillus subtilis BLAP Apo form (energy minimized mean structure)
Descriptor: Biotin/Lipoyl Attachment Protein
Authors:Cui, G, Xia, B, Jin, C.
Deposit date:2005-10-06
Release date:2006-06-06
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:solution structure of Bacillus subtilis BLAP Apo form (energy minimized mean structure)
To be published
1O7C
DownloadVisualize
BU of 1o7c by Molmil
Solution structure of the human TSG-6 Link module in the presence of a hyaluronan octasaccharide
Descriptor: TUMOR NECROSIS FACTOR-INDUCIBLE PROTEIN TSG-6
Authors:Blundell, C.D, Teriete, P, Kahmann, J.D, Pickford, A.R, Campbell, I.D, Day, A.J.
Deposit date:2002-10-29
Release date:2003-10-23
Last modified:2018-01-24
Method:SOLUTION NMR
Cite:The link module from ovulation- and inflammation-associated protein TSG-6 changes conformation on hyaluronan binding.
J. Biol. Chem., 278, 2003
1O83
DownloadVisualize
BU of 1o83 by Molmil
Crystal Structure of Bacteriocin AS-48 at pH 7.5, phosphate bound. Crystal form I
Descriptor: GLYCEROL, PEPTIDE ANTIBIOTIC AS-48, PHOSPHATE ION
Authors:Sanchez-Barrena, M.J, Martinez-Ripoll, M, Galvez, A, Valdivia, E, Maqueda, M, Cruz, V, Albert, A.
Deposit date:2002-11-25
Release date:2003-11-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Structure of Bacteriocin as-48: From Soluble State to Membrane Bound State
J.Mol.Biol., 334, 2003
1RMY
DownloadVisualize
BU of 1rmy by Molmil
Crystal structure of AphA class B acid phosphatase/phosphotransferase ternary complex with deoxycytosine and phosphate bound to the catalytic metal
Descriptor: 2'-DEOXYCYTIDINE, Class B acid phosphatase, MAGNESIUM ION, ...
Authors:Calderone, V, Forleo, C, Benvenuti, M, Rossolini, G.M, Thaller, M.C, Mangani, S.
Deposit date:2003-11-28
Release date:2004-12-14
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Insights in the catalytic mechanism of AphA from Escherichia coli
To be Published
2ANT
DownloadVisualize
BU of 2ant by Molmil
THE 2.6 A STRUCTURE OF ANTITHROMBIN INDICATES A CONFORMATIONAL CHANGE AT THE HEPARIN BINDING SITE
Descriptor: 2-acetamido-2-deoxy-beta-D-allopyranose, ANTITHROMBIN
Authors:Skinner, R, Abrahams, J.-P, Whisstock, J.C, Lesk, A.M, Carrell, R.W, Wardell, M.R.
Deposit date:1997-01-28
Release date:1997-06-16
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The 2.6 A structure of antithrombin indicates a conformational change at the heparin binding site.
J.Mol.Biol., 266, 1997

225946

PDB entries from 2024-10-09

PDB statisticsPDBj update infoContact PDBjnumon