Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

3CMH
DownloadVisualize
BU of 3cmh by Molmil
SYNTHETIC LINEAR TRUNCATED ENDOTHELIN-1 AGONIST
Descriptor: PROTEIN (ENDOTHELIN-1)
Authors:Hewage, C.M, Jiang, L, Parkinson, J.A, Ramage, R, Sadler, I.H.
Deposit date:1998-09-03
Release date:1999-09-29
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of a novel ETB receptor selective agonist ET1-21 [Cys(Acm)1,15, Aib3,11, Leu7] by nuclear magnetic resonance spectroscopy and molecular modelling.
J.Pept.Res., 53, 1999
3CML
DownloadVisualize
BU of 3cml by Molmil
Crystal Structure of the DBL3x domain of the Plasmodium falcipurum VAR2CSA protein
Descriptor: Erythrocyte membrane protein 1
Authors:Singh, K, Gittis, A.G, Nguyen, P, Gowda, D.C, Miller, L.H, Garboczi, D.N.
Deposit date:2008-03-23
Release date:2008-09-02
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of the DBL3x domain of pregnancy-associated malaria protein VAR2CSA complexed with chondroitin sulfate A.
Nat.Struct.Mol.Biol., 15, 2008
5KCC
DownloadVisualize
BU of 5kcc by Molmil
Crystal Structure of the ER-alpha Ligand-binding Domain (Y537S) in Complex with Oxabicyclic Heptene Sulfonamide (OBHS-N)
Descriptor: (1S,2R,4S)-5,6-bis(4-hydroxyphenyl)-N-phenyl-7-oxabicyclo[2.2.1]hept-5-ene-2-sulfonamide, Estrogen receptor, NCOA2
Authors:Nwachukwu, J.C, Srinivasan, S, Zheng, Y, Wang, S, Min, J, Dong, C, Liao, Z, Cavett, V, Nowak, J, Houtman, R, Carlson, K.E, Josan, J.S, Elemento, O, Katzenellenbogen, J.A, Zhou, H.B, Nettles, K.W.
Deposit date:2016-06-06
Release date:2016-11-16
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.386 Å)
Cite:Full antagonism of the estrogen receptor without a prototypical ligand side chain.
Nat. Chem. Biol., 13, 2017
3CMT
DownloadVisualize
BU of 3cmt by Molmil
Mechanism of homologous recombination from the RecA-ssDNA/dsDNA structures
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA (5'-D(*DTP*DTP*DTP*DTP*DTP*DCP*DCP*DCP*DAP*DCP*DCP*DTP*DTP*DTP*DT)-3'), DNA (5'-D(P*DGP*DGP*DTP*DGP*DGP*DG)-3'), ...
Authors:Chen, Z, Yang, H, Pavletich, N.P.
Deposit date:2008-03-24
Release date:2008-05-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Mechanism of homologous recombination from the RecA-ssDNA/dsDNA structures.
Nature, 453, 2008
1LJN
DownloadVisualize
BU of 1ljn by Molmil
Crystal Structure of Turkey Egg Lysozyme Complex with Di-N-acetylchitobiose at 1.19A Resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, SULFATE ION, lysozyme C
Authors:Harata, K, Kanai, R.
Deposit date:2002-04-22
Release date:2002-06-05
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:Crystallographic dissection of the thermal motion of protein-sugar complex.
Proteins, 48, 2002
3CP0
DownloadVisualize
BU of 3cp0 by Molmil
Crystal structure of the soluble domain of membrane protein implicated in regulation of membrane protease activity from Corynebacterium glutamicum
Descriptor: CHLORIDE ION, Membrane protein implicated in regulation of membrane protease activity, ZINC ION
Authors:Kim, Y, Tesar, C, Abdullah, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2008-03-30
Release date:2008-04-15
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:The crystal structure of the soluble domain of membrane protein implicated in regulation of membrane protease activity from Corynebacterium glutamicum.
To be Published
3CP5
DownloadVisualize
BU of 3cp5 by Molmil
Cytochrome c from rhodothermus marinus
Descriptor: Cytochrome c, HEME C, SULFATE ION
Authors:Stelter, M, Melo, A, Saraiva, L, Teixeira, M, Archer, M.
Deposit date:2008-03-31
Release date:2008-10-28
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:A novel type of monoheme cytochrome c: biochemical and structural characterization at 1.23 A resolution of rhodothermus marinus cytochrome c
Biochemistry, 47, 2008
1LL4
DownloadVisualize
BU of 1ll4 by Molmil
STRUCTURE OF C. IMMITIS CHITINASE 1 COMPLEXED WITH ALLOSAMIDIN
Descriptor: 2-acetamido-2-deoxy-beta-D-allopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-allopyranose, ALLOSAMIZOLINE, CHITINASE 1
Authors:Bortone, K, Monzingo, A.F, Ernst, S, Robertus, J.D.
Deposit date:2002-04-26
Release date:2002-09-25
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:THE STRUCTURE OF AN ALLOSAMIDIN COMPLEX WITH THE Coccidioides IMMITIS CHITINASE DEFINES A ROLE FOR A SECOND ACID RESIDUE IN SUBSTRATE-ASSISTED MECHANISM
J.Mol.Biol., 320, 2002
3D4T
DownloadVisualize
BU of 3d4t by Molmil
Crystal structure of the periplasmic thioredoxin SoxS from Paracoccus pantotrophus (oxidized form)
Descriptor: BETA-MERCAPTOETHANOL, Putative uncharacterized protein
Authors:Carius, Y, Friedrich, C.G, Scheidig, A.J.
Deposit date:2008-05-15
Release date:2008-07-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structure of the periplasmic thioredoxin SoxS from Paracoccus pantotrophus indicates a dual Trx/Grx functionality for activation of chemotrophic sulfur oxidation in vivo
To be Published
1LMT
DownloadVisualize
BU of 1lmt by Molmil
STRUCTURE OF A CONFORMATIONALLY CONSTRAINED ARG-GLY-ASP SEQUENCE INSERTED INTO HUMAN LYSOZYME
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, HUMAN LYSOZYME
Authors:Matsushima, M, Song, H.
Deposit date:1995-01-13
Release date:1995-03-31
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of a conformationally constrained Arg-Gly-Asp sequence inserted into human lysozyme.
J.Biol.Chem., 270, 1995
3CPK
DownloadVisualize
BU of 3cpk by Molmil
Crystal structure of the Q7W7N7_BORPA protein from Bordetella parapertussis. Northeast Structural Genomics Consortium target BeR31
Descriptor: Uncharacterized protein Q7W7N7_BORPA
Authors:Vorobiev, S.M, Abashidze, M, Seetharaman, J, Zhao, L, Janjua, H, Xiao, R, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2008-03-31
Release date:2008-04-15
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of the Q7W7N7_BORPA protein from Bordetella parapertussis.
To be Published
1LOG
DownloadVisualize
BU of 1log by Molmil
X-RAY STRUCTURE OF A (ALPHA-MAN(1-3)BETA-MAN(1-4)GLCNAC)-LECTIN COMPLEX AT 2.1 ANGSTROMS RESOLUTION
Descriptor: CALCIUM ION, LEGUME ISOLECTIN I (ALPHA CHAIN), LEGUME ISOLECTIN I (BETA CHAIN), ...
Authors:Bourne, Y, Cambillau, C.
Deposit date:1994-01-27
Release date:1994-04-30
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:X-ray structure of a (alpha-Man(1-3)beta-Man(1-4)GlcNAc)-lectin complex at 2.1-A resolution. The role of water in sugar-lectin interaction.
J.Biol.Chem., 265, 1990
3CQ1
DownloadVisualize
BU of 3cq1 by Molmil
Structure of the DTDP-4-Keto-L-Rhamnose Reductase related protein (TT1362) from Thermus Thermophilus HB8
Descriptor: Putative uncharacterized protein TTHB138
Authors:Jeyakanthan, J, Satoh, S, Kitamura, Y, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2008-04-02
Release date:2009-04-07
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of the DTDP-4-Keto-L-Rhamnose Reductase related protein (TT1362) from Thermus Thermophilus HB8
To be Published
3D5G
DownloadVisualize
BU of 3d5g by Molmil
Structure of ribonuclease Sa2 complexes with mononucleotides: new aspects of catalytic reaction and substrate recognition
Descriptor: Ribonuclease, SULFATE ION
Authors:Bauerova-Hlinkova, V, Dvorsky, R, Povazanec, F, Sevcik, J.
Deposit date:2008-05-16
Release date:2009-05-26
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of RNase Sa2 complexes with mononucleotides - new aspects of catalytic reaction and substrate recognition
Febs J., 276, 2009
3D6A
DownloadVisualize
BU of 3d6a by Molmil
Crystal structure of the 2H-phosphatase domain of Sts-2 in complex with tungstate.
Descriptor: MAGNESIUM ION, SODIUM ION, Sts-2 protein, ...
Authors:Chen, Y, Carpino, N, Nassar, N.
Deposit date:2008-05-19
Release date:2009-03-03
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural and functional characterization of the 2H-phosphatase domain of Sts-2 reveals an acid-dependent phosphatase activity.
Biochemistry, 48, 2009
3CQ9
DownloadVisualize
BU of 3cq9 by Molmil
Crystal structure of the lp_1622 protein from Lactobacillus plantarum. Northeast Structural Genomics Consortium target LpR114
Descriptor: SULFATE ION, Uncharacterized protein lp_1622
Authors:Vorobiev, S.M, Abashidze, M, Seetharaman, J, Zhao, L, Maglaqui, M, Foote, E.L, Ciccosanti, C, Janjua, H, Xiao, R, Acton, T.B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2008-04-02
Release date:2008-04-15
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of the lp_1622 protein from Lactobacillus plantarum.
To be Published
5K6Z
DownloadVisualize
BU of 5k6z by Molmil
Sidekick chimera containing sidekick-2 immunoglobulin domains 1-2 and sidekick-1 immunoglobulin domains 3-4
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Goodman, K.M, Mannepalli, S, Honig, B, Shapiro, L.
Deposit date:2016-05-25
Release date:2016-09-28
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Molecular basis of sidekick-mediated cell-cell adhesion and specificity.
Elife, 5, 2016
9MHW
DownloadVisualize
BU of 9mhw by Molmil
Human TLR8 ectodomain with small molecule agonist 9
Descriptor: (3S)-3-[(2-amino-5-{[2-methoxy-5-({[(3S)-oxolan-3-yl]amino}methyl)phenyl]methyl}-5H-pyrimido[5,4-b]indol-4-yl)amino]hexan-1-ol, 2-acetamido-2-deoxy-beta-D-glucopyranose, NICKEL (II) ION, ...
Authors:Critton, D.A.
Deposit date:2024-12-12
Release date:2025-03-05
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Structure-Based Design of Novel TLR7/8 Agonist Payloads Enabling an Immunomodulatory Conjugate Approach.
Acs Med.Chem.Lett., 16, 2025
3CRD
DownloadVisualize
BU of 3crd by Molmil
NMR STRUCTURE OF THE RAIDD CARD DOMAIN, 15 STRUCTURES
Descriptor: RAIDD
Authors:Chou, J.J, Matsuo, H, Duan, H, Wagner, G.
Deposit date:1998-07-24
Release date:1999-02-02
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the RAIDD CARD and model for CARD/CARD interaction in caspase-2 and caspase-9 recruitment.
Cell(Cambridge,Mass.), 94, 1998
3CRJ
DownloadVisualize
BU of 3crj by Molmil
Crystal structure of a TetR transcription regulator from Haloarcula marismortui ATCC 43049
Descriptor: CHLORIDE ION, Transcription regulator
Authors:Tan, K, Zhou, M, Freeman, L, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2008-04-07
Release date:2008-04-22
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The crystal structure of a TetR transcription regulator from Haloarcula marismortui ATCC 43049.
To be Published
3CS0
DownloadVisualize
BU of 3cs0 by Molmil
Crystal structure of DegP24
Descriptor: Periplasmic serine endoprotease DegP, pentapeptide
Authors:Krojer, T, Sawa, J, Schaefer, E, Saibil, H.R, Ehrmann, M, Clausen, T.
Deposit date:2008-04-08
Release date:2008-05-27
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural basis for the regulated protease and chaperone function of DegP
Nature, 453, 2008
3CSB
DownloadVisualize
BU of 3csb by Molmil
Crystal Structure of Monobody YSX1/Maltose Binding Protein Fusion Complex
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, MANGANESE (II) ION, ...
Authors:Gilbreth, R.N, Koide, S.
Deposit date:2008-04-09
Release date:2008-07-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.999 Å)
Cite:A Dominant Conformational Role for Amino Acid Diversity in Minimalist Protein-Protein Interfaces
J.Mol.Biol., 381, 2008
3CSO
DownloadVisualize
BU of 3cso by Molmil
HCV Polymerase in complex with a 1,5 Benzodiazepine inhibitor
Descriptor: (11S)-10-acetyl-11-[4-(benzyloxy)-3-chlorophenyl]-3,3-dimethyl-2,3,4,5,10,11-hexahydro-1H-dibenzo[b,e][1,4]diazepin-1-one, RNA-directed RNA polymerase
Authors:Nyanguile, O.
Deposit date:2008-04-10
Release date:2009-04-14
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:1,5-benzodiazepines, a novel class of hepatitis C virus polymerase nonnucleoside inhibitors.
Antimicrob.Agents Chemother., 52, 2008
9MHY
DownloadVisualize
BU of 9mhy by Molmil
Human TLR8 ectodomain with small molecule agonist 1
Descriptor: (3S,4R)-4-[({3-[(5-amino-7-{[(3S)-1-hydroxyhexan-3-yl]amino}-1H-pyrazolo[4,3-d]pyrimidin-1-yl)methyl]-4-methoxyphenyl}methyl)amino]oxolan-3-ol, 2-acetamido-2-deoxy-beta-D-glucopyranose, SULFATE ION, ...
Authors:Critton, D.A.
Deposit date:2024-12-12
Release date:2025-03-05
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Structure-Based Design of Novel TLR7/8 Agonist Payloads Enabling an Immunomodulatory Conjugate Approach.
Acs Med.Chem.Lett., 16, 2025
3CTI
DownloadVisualize
BU of 3cti by Molmil
RELAXATION MATRIX REFINEMENT OF THE SOLUTION STRUCTURE OF SQUASH TRYPSIN INHIBITOR
Descriptor: TRYPSIN INHIBITOR
Authors:Nilges, M, Habazettl, J, Bruenger, A.T, Holak, T.A.
Deposit date:1991-03-27
Release date:1992-04-15
Last modified:2024-10-23
Method:SOLUTION NMR
Cite:Relaxation matrix refinement of the solution structure of squash trypsin inhibitor.
J.Mol.Biol., 219, 1991

238582

PDB entries from 2025-07-09

PDB statisticsPDBj update infoContact PDBjnumon