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5Y2J
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BU of 5y2j by Molmil
Crystal structure of the oligomerization domain of NSP4 from rotavirus strain MF66
Descriptor: 1,2-ETHANEDIOL, NICKEL (II) ION, Nonstructural protein 4
Authors:Suguna, K, Kumar, S.
Deposit date:2017-07-26
Release date:2018-03-14
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:New tetrameric forms of the rotavirus NSP4 with antiparallel helices.
Arch. Virol., 163, 2018
9AUY
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BU of 9auy by Molmil
Crystal structure of S. aureus GuaB dCBS with inhibitor GNE9123
Descriptor: INOSINIC ACID, Inosine-5'-monophosphate dehydrogenase, N-(6-chloropyridin-3-yl)-N~2~-(1,4-dihydro-2H-pyrano[3,4-c]quinolin-9-yl)-L-alaninamide
Authors:Harris, S.F, Wu, P.
Deposit date:2024-03-01
Release date:2025-01-15
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Discovery of GuaB inhibitors with efficacy against Acinetobacter baumannii infection.
Mbio, 15, 2024
6XWY
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BU of 6xwy by Molmil
Highly pH-resistant long stokes-shift, red fluorescent protein mCRISPRed
Descriptor: 1,2-ETHANEDIOL, MALONIC ACID, Red fluorescent protein eqFP611
Authors:Erdogan, M, Fabritius, A, Basquin, J, Griesbeck, O.
Deposit date:2020-01-24
Release date:2020-02-05
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Targeted In Situ Protein Diversification and Intra-organelle Validation in Mammalian Cells.
Cell Chem Biol, 27, 2020
6P80
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BU of 6p80 by Molmil
Structure of E. coli MS115-1 CdnC + ATP
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, ...
Authors:Ye, Q, Azimi, C.S, Corbett, K.D.
Deposit date:2019-06-06
Release date:2019-12-25
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:HORMA Domain Proteins and a Trip13-like ATPase Regulate Bacterial cGAS-like Enzymes to Mediate Bacteriophage Immunity.
Mol.Cell, 77, 2020
8V95
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BU of 8v95 by Molmil
GII.8 Amsterdam norovirus protruding domain
Descriptor: 1,2-ETHANEDIOL, Capsid protein (Fragment)
Authors:Kher, G, Prewitt, A, Pancera, M, Hansman, G.
Deposit date:2023-12-07
Release date:2024-06-19
Last modified:2024-07-31
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Development of a broad-spectrum therapeutic Fc-nanobody for human noroviruses.
J.Virol., 98, 2024
9AVE
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BU of 9ave by Molmil
Mitochondrial fission 1 protein Fis1 T34E mutation
Descriptor: Mitochondrial fission 1 protein
Authors:Mathews, I.I, Pokhrel, S, Wakatsuki, S.
Deposit date:2024-03-01
Release date:2025-05-21
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:A hidden cysteine in Fis1 targeted to prevent excessive mitochondrial fission and dysfunction under oxidative stress.
Nat Commun, 16, 2025
8HZD
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BU of 8hzd by Molmil
A new fluorescent RNA aptamer bound with N618
Descriptor: 4-[(~{E})-2-[(4~{Z})-4-[[3,5-bis(fluoranyl)-4-oxidanyl-phenyl]methylidene]-1-methyl-5-oxidanylidene-imidazol-2-yl]ethenyl]benzenecarbonitrile, MAGNESIUM ION, RNA (36-MER)
Authors:Song, Q.Q, Ren, A.M.
Deposit date:2023-01-09
Release date:2024-06-19
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Structural basis of a small monomeric Clivia fluorogenic RNA with a large Stokes shift.
Nat.Chem.Biol., 20, 2024
9QAT
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BU of 9qat by Molmil
Human angiotensin-1 converting enzyme N-domain in complex with quinaprilat
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Gregory, K.S, Acharya, K.R.
Deposit date:2025-02-28
Release date:2025-09-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Molecular basis of domain-specific angiotensin I-converting enzyme inhibition by the antihypertensive drugs enalaprilat, ramiprilat, trandolaprilat, quinaprilat and perindoprilat.
Febs J., 2025
6N01
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BU of 6n01 by Molmil
Structure of apo AztD from Citrobacter koseri
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, AztD Protein, ...
Authors:Yukl, E.T, Neupane, D.P.
Deposit date:2018-11-06
Release date:2019-09-18
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Crystal structures of AztD provide mechanistic insights into direct zinc transfer between proteins.
Commun Biol, 2, 2019
8CUR
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BU of 8cur by Molmil
Crystal structure of Cdk2 in complex with Cyclin A inhibitor 6-[(E)-2-(4-chlorophenyl)ethenyl]-2-{[(2R)-3-(4-hydroxyphenyl)-1-methoxy-1-oxopropan-2-yl]carbamoyl}quinoline-4-carboxylic acid
Descriptor: 6-[(E)-2-(4-chlorophenyl)ethenyl]-2-{[(2R)-3-(4-hydroxyphenyl)-1-methoxy-1-oxopropan-2-yl]carbamoyl}quinoline-4-carboxylic acid, Cyclin-dependent kinase 2
Authors:Tripathi, S.M, Tambo, C.S, Kiss, G, Rubin, S.M.
Deposit date:2022-05-17
Release date:2023-04-05
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Biolayer Interferometry Assay for Cyclin-Dependent Kinase-Cyclin Association Reveals Diverse Effects of Cdk2 Inhibitors on Cyclin Binding Kinetics.
Acs Chem.Biol., 18, 2023
6DN3
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BU of 6dn3 by Molmil
CRYSTAL STRUCTURE OF THE FMN RIBOSWITCH BOUND TO BRX1555 SPLIT RNA
Descriptor: 7,8-dimethyl-2,4-dioxo-10-(3-phenylpropyl)-1,2,3,4-tetrahydrobenzo[g]pteridin-10-ium, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Vicens, Q, Mondragon, E, Reyes, F.E, Berman, J, Kaur, H, Kells, K, Wickens, P, Wilson, J, Gadwood, R, Schostarez, H, Suto, R.K, Coish, P, Blount, K.F, Batey, R.T.
Deposit date:2018-06-05
Release date:2018-09-05
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure-Activity Relationship of Flavin Analogues That Target the Flavin Mononucleotide Riboswitch.
ACS Chem. Biol., 13, 2018
6NCN
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BU of 6ncn by Molmil
Fragment-based Discovery of an apoE4 Stabilizer
Descriptor: 1-(3-chlorophenyl)cyclobutane-1-carboximidamide, Apolipoprotein E
Authors:Jakob, C.G, Qiu, W.
Deposit date:2018-12-11
Release date:2019-04-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Fragment-Based Discovery of an Apolipoprotein E4 (apoE4) Stabilizer.
J.Med.Chem., 62, 2019
5MWE
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BU of 5mwe by Molmil
Complex between the Leucine Zipper (LZ, residues 490-567) and Centrosomin-motif 2 (CM2) domains of Drosophila melanogaster Centrosomin (Cnn)
Descriptor: 1,2-ETHANEDIOL, 3,3',3''-phosphanetriyltripropanoic acid, Centrosomin, ...
Authors:Feng, Z, Johnson, S, Raff, J.W, Lea, S.M.
Deposit date:2017-01-18
Release date:2017-06-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Structural Basis for Mitotic Centrosome Assembly in Flies.
Cell, 169, 2017
6VV7
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BU of 6vv7 by Molmil
Mycobacterium tuberculosis dihydrofolate reductase in complex with JEB136
Descriptor: 5-[3-(5-methyl-1H-indol-3-yl)propoxy]-1-phenyl-1H-pyrazole-4-carboxylic acid, COBALT (II) ION, Dihydrofolate reductase, ...
Authors:Ribeiro, J.A, Dias, M.V.B, Chavez-Pacheco, S.M.
Deposit date:2020-02-17
Release date:2020-07-15
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.999 Å)
Cite:Using a Fragment-Based Approach to Identify Alternative Chemical Scaffolds Targeting Dihydrofolate Reductase fromMycobacterium tuberculosis.
Acs Infect Dis., 6, 2020
6SA8
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BU of 6sa8 by Molmil
ring-like DARPin-Armadillo fusion H83_D01
Descriptor: 1,2-ETHANEDIOL, LYS-ARG-LYS-ARG-LYS-ARG-LYS-ARG-LYS-ARG, ring-like DARPin-Armadillo fusion H83_D01
Authors:Ernst, P, Honegger, A, van der Valk, F, Ewald, C, Mittl, P.R.E, Plucktun, A.
Deposit date:2019-07-16
Release date:2019-11-20
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Rigid fusions of designed helical repeat binding proteins efficiently protect a binding surface from crystal contacts.
Sci Rep, 9, 2019
7M8U
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BU of 7m8u by Molmil
Crystal Structure of HLA-B*35:01 in complex with IPFAMQMAY, an 9-mer epitope from SARS-CoV-2 spike (S896-904)
Descriptor: Beta-2-microglobulin, HLA class I histocompatibility antigen B, alpha chain, ...
Authors:Gras, S, Nguyen, A.T, Szeto, C.
Deposit date:2021-03-30
Release date:2021-06-23
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:SARS-CoV-2 Spike-Derived Peptides Presented by HLA Molecules
Biophysica, 1, 2021
6VV8
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BU of 6vv8 by Molmil
Mycobacterium tuberculosis dihydrofolate reductase in complex with JEB285
Descriptor: 5-{[3-(1H-indol-3-yl)propanoyl]amino}-1-phenyl-1H-pyrazole-4-carboxylic acid, COBALT (II) ION, Dihydrofolate reductase, ...
Authors:Ribeiro, J.A, Chavez-Pacheco, S.M, Dias, M.V.B.
Deposit date:2020-02-17
Release date:2020-07-15
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.683 Å)
Cite:Using a Fragment-Based Approach to Identify Alternative Chemical Scaffolds Targeting Dihydrofolate Reductase fromMycobacterium tuberculosis.
Acs Infect Dis., 6, 2020
8JQH
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BU of 8jqh by Molmil
Cryo EM map of full length PLC gamma 2 in autoinhibition state
Descriptor: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2
Authors:Shin, Y.-C, Liao, M.
Deposit date:2023-06-14
Release date:2024-12-11
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:The crystal and cryo-EM structures of PLC gamma 2 reveal dynamic interdomain recognitions in autoinhibition.
Sci Adv, 10, 2024
8VLC
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BU of 8vlc by Molmil
Crystal structure of Zn-dependent hydrolase from Salmonella typhimurium LT2
Descriptor: 1,2-ETHANEDIOL, HARLDQ motif MBL-fold protein, SULFATE ION
Authors:Chang, C, Maltseva, N, Endres, M, Joachimiak, A, Center for Structural Biology of Infectious Diseases, Center for Structural Biology of Infectious Diseases (CSBID)
Deposit date:2024-01-11
Release date:2024-07-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of Zn-dependent hydrolase from Salmonella typhimurium LT2
To Be Published
6VV9
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BU of 6vv9 by Molmil
Mycobacterium tuberculosis dihydrofolate reductase in complex with JEB300
Descriptor: 5-[4-(1H-indol-3-yl)butoxy]-1-phenyl-1H-pyrazole-4-carboxylic acid, COBALT (II) ION, Dihydrofolate reductase, ...
Authors:Ribeiro, J.A, Chavez-Pacheco, S.M, Dias, M.V.B.
Deposit date:2020-02-17
Release date:2020-07-15
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Using a Fragment-Based Approach to Identify Alternative Chemical Scaffolds Targeting Dihydrofolate Reductase fromMycobacterium tuberculosis.
Acs Infect Dis., 6, 2020
8OFR
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BU of 8ofr by Molmil
Human adenovirus type 25 fiber-knob protein complexed with sialic acid
Descriptor: Fiber, N-acetyl-beta-neuraminic acid
Authors:Rizkallah, P.J, Parker, A.L, Mundy, R.M, Baker, A.T.
Deposit date:2023-03-16
Release date:2023-09-20
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Broad sialic acid usage amongst species D human adenovirus.
Npj Viruses, 1, 2023
7O4D
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BU of 7o4d by Molmil
QR2 inhibitor from a novel sulfanamide series to tackle age related oxidative stress and cognitive decline
Descriptor: 8-methyl-2-(4-methyl-3-piperazin-1-ylsulfonyl-phenyl)imidazo[1,2-a]pyridine, FLAVIN-ADENINE DINUCLEOTIDE, Ribosyldihydronicotinamide dehydrogenase [quinone], ...
Authors:Gould, N.L, Scherer, G.R, Carvalh, S, Shurrush, K, Edry, E, Elkobi, A, David, O, Dym, O, Albeck, S, Peleg, Y, Germain, N, Babaev, I, Sharir, H, Lefker, B, Subramanyam, C, Barr, H, Rosenblum, K.
Deposit date:2021-04-06
Release date:2022-08-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.249 Å)
Cite:Specific quinone reductase 2 inhibitors reduce metabolic burden and reverse Alzheimer's disease phenotype in mice.
J.Clin.Invest., 133, 2023
8OFS
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BU of 8ofs by Molmil
Human adenovirus type 30 fiber-knob protein complexed with sialic acid
Descriptor: Fiber, N-acetyl-beta-neuraminic acid
Authors:Rizkallah, P.J, Parker, A.L, Mundy, R.M, Baker, A.T.
Deposit date:2023-03-16
Release date:2023-09-20
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:Broad sialic acid usage amongst species D human adenovirus.
Npj Viruses, 1, 2023
6VS8
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BU of 6vs8 by Molmil
Mycobacterium tuberculosis dihydrofolate reductase in complex with ethyl 2-methyl thiazole-4-carboxylate(fragment 3)
Descriptor: COBALT (II) ION, Dihydrofolate reductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Ribeiro, J.A, Dias, M.V.B.
Deposit date:2020-02-10
Release date:2020-07-15
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.829 Å)
Cite:Using a Fragment-Based Approach to Identify Alternative Chemical Scaffolds Targeting Dihydrofolate Reductase fromMycobacterium tuberculosis.
Acs Infect Dis., 6, 2020
8SSW
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BU of 8ssw by Molmil
Crystal structure of DEAD-box RNA helicase DDX3X in complex with ADP at pre-unwound state
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, ATP-dependent RNA helicase DDX3X, ...
Authors:Song, H, Ji, X.
Deposit date:2023-05-09
Release date:2024-05-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of DEAD-box RNA helicase DDX3X in complex with ADP at pre-unwound state
To be published

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