PDB: 204265 resultsInfo pagesStatus searchChemie searchBIRD

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6AEM	Crystal structure of the PKD1 domain of Vibrio anguillarum Epp Descriptor: CALCIUM ION, PKD domain, ZINC ION Authors: Ma, Q, Li, P. Deposit date: 2018-08-05 Release date: 2018-12-12 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (1.272 Å) Cite: Structural basis for specific calcium binding by the polycystic-kidney-disease domain of Vibrio anguillarum protease Epp Biochem. Biophys. Res. Commun., 505, 2018
6LAU	the wildtype SAM-VI riboswitch bound to SAH Descriptor: CESIUM ION, GUANOSINE-5'-TRIPHOSPHATE, RNA (54-MER), ... Authors: Ren, A, Sun, A. Deposit date: 2019-11-13 Release date: 2020-01-01 Last modified: 2025-03-12 Method: X-RAY DIFFRACTION (3.109 Å) Cite: SAM-VI riboswitch structure and signature for ligand discrimination. Nat Commun, 10, 2019
1ZOS	Structure of 5'-methylthionadenosine/S-Adenosylhomocysteine nucleosidase from S. pneumoniae with a transition-state inhibitor MT-ImmA Descriptor: (3S,4R)-2-(4-AMINO-5H-PYRROLO[3,2-D]PYRIMIDIN-7-YL)-5-[(METHYLSULFANYL)METHYL]PYRROLIDINE-3,4-DIOL, 5'-methylthioadenosine / S-adenosylhomocysteine nucleosidase Authors: Shi, W, Singh, V, Zhen, R, Tyler, P.C, Furneaux, R.H, Almo, S.C, Schramm, V.L. Deposit date: 2005-05-13 Release date: 2006-04-25 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Structure and inhibition of a quorum sensing target from Streptococcus pneumoniae. Biochemistry, 45, 2006
3A4M	Crystal structure of archaeal O-phosphoseryl-tRNA(Sec) kinase Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, IODIDE ION, ... Authors: Araiso, Y, Ishitani, R, Soll, D, Nureki, O. Deposit date: 2009-07-10 Release date: 2009-10-20 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (1.792 Å) Cite: Structure of a tRNA-dependent kinase essential for selenocysteine decoding Proc.Natl.Acad.Sci.USA, 106, 2009
3A4N	Crystal structure of archaeal O-phosphoseryl-tRNA(Sec) kinase Descriptor: 1,2-ETHANEDIOL, IODIDE ION, L-seryl-tRNA(Sec) kinase, ... Authors: Araiso, Y, Ishitani, R, Soll, D, Nureki, O. Deposit date: 2009-07-10 Release date: 2009-10-20 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Structure of a tRNA-dependent kinase essential for selenocysteine decoding Proc.Natl.Acad.Sci.USA, 106, 2009
3DUW	Crystal Structural Analysis of the O-methyltransferase from Bacillus cereus in complex SAH Descriptor: O-methyltransferase, putative, S-ADENOSYL-L-HOMOCYSTEINE Authors: Cho, J.-H, Rhee, S. Deposit date: 2008-07-18 Release date: 2008-08-05 Last modified: 2024-11-20 Method: X-RAY DIFFRACTION (1.2 Å) Cite: Structural and functional insights into O-methyltransferase from Bacillus cereus J.Mol.Biol., 382, 2008
3A4L	Crystal structure of archaeal O-phosphoseryl-tRNA(Sec) kinase Descriptor: 1,2-ETHANEDIOL, IODIDE ION, L-seryl-tRNA(Sec) kinase, ... Authors: Araiso, Y, Ishitani, R, Soll, D, Nureki, O. Deposit date: 2009-07-10 Release date: 2009-10-20 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Structure of a tRNA-dependent kinase essential for selenocysteine decoding Proc.Natl.Acad.Sci.USA, 106, 2009
1QY7	The structure of the PII protein from the cyanobacteria Synechococcus sp. PCC 7942 Descriptor: NICKEL (II) ION, Nitrogen regulatory protein P-II, SULFATE ION Authors: Xu, Y, Carr, P.D, Clancy, P, Garcia-Dominguez, M, Forchhammer, K, Florencio, F, Tandeau de Marsac, N, Vasudevan, S.G, Ollis, D.L. Deposit date: 2003-09-09 Release date: 2003-09-23 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2 Å) Cite: The structures of the PII proteins from the cyanobacteria Synechococcus sp. PCC 7942 and Synechocystis sp. PCC 6803. Acta Crystallogr.,Sect.D, 59, 2003
2M2X	Solution structure of the antimicrobial peptide [Aba3,5,7,12,14,16]BTD-2 Descriptor: [Aba3,5,7,12,14,16]BTD-2 Authors: Conibear, A.C, Rosengren, K, Daly, N.L, Troiera Henriques, S, Craik, D.J. Deposit date: 2013-01-03 Release date: 2013-02-27 Last modified: 2023-11-15 Method: SOLUTION NMR Cite: The cyclic cystine ladder in theta-defensins is important for structure and stability, but not antibacterial activity. J.Biol.Chem., 288, 2013
4GQV	Crystal structure of CBS-pair protein, CBSX1 from Arabidopsis thaliana Descriptor: CBS domain-containing protein CBSX1, chloroplastic Authors: Jeong, B.-C, Park, S.H, Yoo, K.S, Shin, J.S, Song, H.K. Deposit date: 2012-08-24 Release date: 2013-01-16 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (2.392 Å) Cite: Crystal structure of the single cystathionine beta-synthase domain-containing protein CBSX1 from Arabidopsis thaliana Biochem.Biophys.Res.Commun., 430, 2013
3SL7	Crystal structure of CBS-pair protein, CBSX2 from Arabidopsis thaliana Descriptor: ACETATE ION, CBS domain-containing protein CBSX2, GLYCEROL Authors: Jeong, B.-C, Lee, M.-R, Song, H.K. Deposit date: 2011-06-24 Release date: 2011-11-09 Last modified: 2024-10-16 Method: X-RAY DIFFRACTION (1.905 Å) Cite: Single cystathionine beta-synthase domain-containing proteins modulate development by regulating the thioredoxin system in Arabidopsis Plant Cell, 23, 2011
4JRW	Crystal structure of Clostridium histolyticum colg collagenase PKD domain 2 at 1.6 Angstrom resolution Descriptor: BROMIDE ION, Collagenase Authors: Sakon, J, Philominathan, S.T.L, Gann, S, Bauer, R, Matsushita, O. Deposit date: 2013-03-22 Release date: 2014-05-21 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Structures of three polycystic kidney disease-like domains from Clostridium histolyticum collagenases ColG and ColH. Acta Crystallogr.,Sect.D, 71, 2015
1GZT	Pseudomonas aeruginosa lectin II (PA-IIL) together with fucose Descriptor: CALCIUM ION, FUCOSE-SPECIFIC LECTIN, alpha-L-fucopyranose Authors: Mitchell, E, Imberty, A, Gilboa-Garber, N. Deposit date: 2002-06-06 Release date: 2002-11-19 Last modified: 2024-05-01 Method: X-RAY DIFFRACTION (1.3 Å) Cite: Structural Basis for Oligosaccharide-Mediated Adhesion of Pseudomonas Aeruginosa in the Lungs of Cystic Fibrosis Patients Nat.Struct.Biol., 9, 2002
3F05	Crystal Structure of Synaptotagmin I C2A domain with Mn(II) Descriptor: MANGANESE (II) ION, SULFATE ION, Synaptotagmin-1 Authors: Guo, F, Dakshinamurthy, R, Thallapuranam, S.K.K, Sakon, J. Deposit date: 2008-10-24 Release date: 2009-10-06 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Cystal structure of synaptotagmin I C2A to be published
3F04	Crystal Structure of Synaptotagmin I C2A domain Descriptor: SULFATE ION, Synaptotagmin-1 Authors: Guo, F, Dakshinamurthy, R, Thallapuranam, S.K.K, Sakon, J. Deposit date: 2008-10-24 Release date: 2009-09-08 Last modified: 2023-12-27 Method: X-RAY DIFFRACTION (1.35 Å) Cite: Cystal structure of synaptotagmin I C2A to be published
8CF2	Solution structure of the RNA helix formed by the 5'-end of U1 snRNA and an A-1 bulged 5'-splice site in complex with SMN-CY Descriptor: 4-[(3~{S})-3-ethylpiperazin-1-yl]-2-fluoranyl-~{N}-(2-methylimidazo[1,2-a]pyrazin-6-yl)benzamide, RNA (5'-R(P*AP*UP*AP*CP*(PSU)P*(PSU)P*AP*CP*CP*UP*G)-3'), RNA (5'-R(P*GP*GP*AP*GP*UP*AP*AP*GP*UP*CP*U)-3') Authors: Malard, F, Marquevielle, J, Campagne, S. Deposit date: 2023-02-02 Release date: 2024-02-21 Last modified: 2024-05-22 Method: SOLUTION NMR Cite: The diversity of splicing modifiers acting on A-1 bulged 5'-splice sites reveals rules for rational drug design. Nucleic Acids Res., 52, 2024
8WGI	Multicyclic peptide molecules targeting ROR1 with high affinity Descriptor: R1-2 Authors: Liu, H.T. Deposit date: 2023-09-21 Release date: 2024-09-25 Last modified: 2025-04-23 Method: SOLUTION NMR Cite: De Novo Discovery of Cysteine Frameworks for Developing Multicyclic Peptide Libraries for Ligand Discovery. J.Am.Chem.Soc., 145, 2023
8WGJ	Multicyclic peptide molecules targeting TROP2 with high affinity Descriptor: T2 Authors: Liu, H.T. Deposit date: 2023-09-21 Release date: 2024-09-25 Last modified: 2025-04-23 Method: SOLUTION NMR Cite: De Novo Discovery of Cysteine Frameworks for Developing Multicyclic Peptide Libraries for Ligand Discovery. J.Am.Chem.Soc., 145, 2023
7Q68	Crystal structure of Chaetomium thermophilum wild-type Ahp1 Descriptor: GLYCEROL, SULFATE ION, Thioredoxin domain-containing protein Authors: Ravichandran, K.E, Wilk, P, Grudnik, P, Glatt, S. Deposit date: 2021-11-05 Release date: 2022-08-31 Last modified: 2024-11-13 Method: X-RAY DIFFRACTION (1.75 Å) Cite: E2/E3-independent ubiquitin-like protein conjugation by Urm1 is directly coupled to cysteine persulfidation. Embo J., 41, 2022
7Q69	Crystal structure of Chaetomium thermophilum C30S Ahp1 in the pre-reaction state Descriptor: GLYCEROL, SULFATE ION, Thioredoxin domain-containing protein Authors: Ravichandran, K.E, Wilk, P, Grudnik, P, Glatt, S. Deposit date: 2021-11-05 Release date: 2022-08-24 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.85 Å) Cite: E2/E3-independent ubiquitin-like protein conjugation by Urm1 is directly coupled to cysteine persulfidation. Embo J., 41, 2022
7Q6A	Crystal structure of Chaetomium thermophilum C30S Ahp1 in post-reaction state Descriptor: GLYCEROL, SULFATE ION, Thioredoxin domain-containing protein Authors: Ravichandran, K.E, Wilk, P, Grudnik, P, Glatt, S. Deposit date: 2021-11-05 Release date: 2022-08-24 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.1 Å) Cite: E2/E3-independent ubiquitin-like protein conjugation by Urm1 is directly coupled to cysteine persulfidation. Embo J., 41, 2022
6Y2H	The crystal structure of human chloride intracellular channel protein 5 Descriptor: Chloride intracellular channel protein 5, THIOCYANATE ION Authors: Ferofontov, A, Giladi, M, Haitin, Y. Deposit date: 2020-02-16 Release date: 2020-05-20 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (2.154 Å) Cite: Conserved cysteine dioxidation enhances membrane interaction of human Cl - intracellular channel 5. Faseb J., 34, 2020
6DX8	Crystal structure of chalcone synthase from Selaginella moellendorffii Descriptor: Chalcone synthase Authors: Liou, G, Chiang, Y.C, Wang, Y, Weng, J.K. Deposit date: 2018-06-28 Release date: 2018-10-17 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (1.7 Å) Cite: Mechanistic basis for the evolution of chalcone synthase catalytic cysteine reactivity in land plants. J. Biol. Chem., 293, 2018
6PPC	Solution structure of conotoxin MiXXVIIA Descriptor: Conopeptide phi-MiXXVIIA Authors: Daly, N.L, Dekan, Z, Jin, A.H, Alewood, P.F. Deposit date: 2019-07-06 Release date: 2019-08-14 Last modified: 2024-10-16 Method: SOLUTION NMR Cite: Conotoxin phi-MiXXVIIA from the Superfamily G2 Employs a Novel Cysteine Framework that Mimics Granulin and Displays Anti-Apoptotic Activity. Angew. Chem. Int. Ed. Engl., 56, 2017
6NI8	Pseudomonas fluorescens isocyanide hydratase rotating anode 298K Descriptor: Isonitrile hydratase InhA Authors: Wilson, M.A, Dasgupta, M, van den Bedem, H. Deposit date: 2018-12-26 Release date: 2020-01-08 Last modified: 2023-10-11 Method: X-RAY DIFFRACTION (1.45 Å) Cite: Cysteine modification can gate non-equilibrium conformational dynamics during enzyme catalysis Biorxiv, 2019

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