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4QIW
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BU of 4qiw by Molmil
Crystal structure of euryarchaeal RNA polymerase from Thermococcus kodakarensis
Descriptor: DNA-directed RNA polymerase, DNA-directed RNA polymerase subunit A'', DNA-directed RNA polymerase subunit D, ...
Authors:Jun, S.-H, Murakami, K.S.
Deposit date:2014-06-02
Release date:2014-10-08
Last modified:2014-11-26
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:The X-ray crystal structure of the euryarchaeal RNA polymerase in an open-clamp configuration.
Nat Commun, 5, 2014
5T7P
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BU of 5t7p by Molmil
Crystal structure of Pisum arvense lectin (PAL) complexed with X-Man
Descriptor: 5-bromo-4-chloro-1H-indol-3-yl alpha-D-mannopyranoside, CALCIUM ION, Lectin, ...
Authors:Pinto-Junior, V.R, Santiago, M.Q, Osterne, V.J.S, Silva-Filho, J.C, Rocha, B.A.M, Delatorre, P, Nascimento, K.S, Cavada, B.S.
Deposit date:2016-09-05
Release date:2017-08-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Crystal structure of Pisum arvense seed lectin (PAL) and characterization of its interaction with carbohydrates by molecular docking and dynamics.
Arch. Biochem. Biophys., 630, 2017
4UW2
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BU of 4uw2 by Molmil
Crystal structure of Csm1 in T.onnurineus
Descriptor: CSM1
Authors:Jung, T.Y, An, Y, Park, K.H, Lee, M.H, Oh, B.H, Woo, E.J.
Deposit date:2014-08-08
Release date:2015-03-25
Last modified:2015-09-23
Method:X-RAY DIFFRACTION (2.632 Å)
Cite:Crystal Structure of the Csm1 Subunit of the Csm Complex and its Single-Stranded DNA-Specific Nuclease Activity.
Structure, 23, 2015
6VNP
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BU of 6vnp by Molmil
Crystal structure of DPO4 extension past 8-oxoadenine (oxoA) and dT
Descriptor: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine, DNA (5'-D(*TP*TP*CP*AP*T*(R5M)P*GP*AP*AP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3'), DNA (5'-D(P*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*CP*T)-3'), ...
Authors:Jung, H, Lee, S.
Deposit date:2020-01-29
Release date:2021-02-03
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Crystal structure of DPO4 extension past 8-oxoadenine (oxoA) and dT
To Be Published
6VKP
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Crystal structure of DPO4 extension past 8-oxoadenine (oxoA) and dG
Descriptor: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine, DNA (5'-D(*GP*GP*GP*GP*GP*AP*AP*AP*GP*AP*TP*TP*CP*G)-3'), DNA (5'-D(*TP*TP*CP*AP*TP*(A38)P*GP*AP*AP*TP*CP*TP*TP*TP*CP*CP*CP*CP*C)-3'), ...
Authors:Jung, H, Lee, S.
Deposit date:2020-01-21
Release date:2021-01-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.54 Å)
Cite:Insights into the mismatch discrimination mechanism of Y-family DNA polymerase Dpo4.
Biochem.J., 478, 2021
2KFB
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BU of 2kfb by Molmil
The structure of the cataract causing P23T mutant of human gamma-D crystallin
Descriptor: Gamma-crystallin D
Authors:Jung, J, Byeon, I.L, Wang, Y, King, J, Gronenborn, A.M.
Deposit date:2009-02-12
Release date:2009-07-28
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The structure of the cataract-causing P23T mutant of human gammaD-crystallin exhibits distinctive local conformational and dynamic changes.
Biochemistry, 48, 2009
2KSG
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BU of 2ksg by Molmil
Solution structure of dermcidin-1L, a human antibiotic peptide
Descriptor: Dermcidin
Authors:Jung, H, Yang, S, Kim, J.
Deposit date:2010-01-04
Release date:2010-03-02
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure and membrane interactions of dermcidin-1L, a human antibiotic peptide
To be Published
4MLL
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BU of 4mll by Molmil
The 1.4 A structure of the class D beta-lactamase OXA-1 K70D complexed with oxacillin
Descriptor: (2R,4S)-5,5-dimethyl-2-[(1R)-1-{[(5-methyl-3-phenyl-1,2-oxazol-4-yl)carbonyl]amino}-2-oxoethyl]-1,3-thiazolidine-4-carb oxylic acid, (4S)-2-METHYL-2,4-PENTANEDIOL, Beta-lactamase OXA-1, ...
Authors:June, C.M, Vallier, B.C, Bonomo, R.A, Leonard, D.A, Powers, R.A.
Deposit date:2013-09-06
Release date:2013-10-09
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Structural Origins of Oxacillinase Specificity in Class D beta-Lactamases.
Antimicrob.Agents Chemother., 58, 2014
5G4D
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BU of 5g4d by Molmil
Crystal structure of the Cas2 in T.onnurineus
Descriptor: CRISPR-ASSOCIATED ENDORIBONUCLEASE CAS2
Authors:Jung, T.Y, Park, K.H, Woo, E.J.
Deposit date:2016-05-12
Release date:2016-07-27
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.701 Å)
Cite:Structural Features of Cas2 from Thermococcus Onnurineus in Crispr-Cas System Type Iv.
Protein Sci., 25, 2016
6RMH
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BU of 6rmh by Molmil
The Rigid-body refined model of the normal Huntingtin.
Descriptor: Huntingtin
Authors:Jung, T, Tamo, G, Dal Perraro, M, Hebert, H, Song, J.
Deposit date:2019-05-06
Release date:2020-06-03
Last modified:2020-12-16
Method:ELECTRON MICROSCOPY (9.6 Å)
Cite:The Polyglutamine Expansion at the N-Terminal of Huntingtin Protein Modulates the Dynamic Configuration and Phosphorylation of the C-Terminal HEAT Domain.
Structure, 28, 2020
6OU9
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BU of 6ou9 by Molmil
Asymmetric focused reconstruction of human norovirus GI.7 Houston strain VLP asymmetric unit in T=3 symmetry
Descriptor: Major capsid protein
Authors:Jung, J, Grant, T, Thomas, D.R, Diehnelt, C.W, Grigorieff, N, Joshua-Tor, L.
Deposit date:2019-05-04
Release date:2019-06-26
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:High-resolution cryo-EM structures of outbreak strain human norovirus shells reveal size variations.
Proc.Natl.Acad.Sci.USA, 116, 2019
6OUT
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BU of 6out by Molmil
Asymmetric focused reconstruction of human norovirus GI.1 Norwalk strain VLP asymmetric unit in T=3 symmetry
Descriptor: Capsid protein VP1
Authors:Jung, J, Grant, T, Thomas, D.R, Diehnelt, C.W, Grigorieff, N, Joshua-Tor, L.
Deposit date:2019-05-05
Release date:2019-06-26
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:High-resolution cryo-EM structures of outbreak strain human norovirus shells reveal size variations.
Proc.Natl.Acad.Sci.USA, 116, 2019
6OUC
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BU of 6ouc by Molmil
Asymmetric focsued reconstruction of human norovirus GII.2 Snow Mountain Virus strain VLP asymmetric unit in T=1 symmetry
Descriptor: Viral protein 1, ZINC ION
Authors:Jung, J, Grant, T, Thomas, D.R, Diehnelt, C.W, Grigorieff, N, Joshua-Tor, L.
Deposit date:2019-05-04
Release date:2019-06-26
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:High-resolution cryo-EM structures of outbreak strain human norovirus shells reveal size variations.
Proc.Natl.Acad.Sci.USA, 116, 2019
6OUU
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BU of 6ouu by Molmil
Symmetric reconstruction of human norovirus GII.4 Minerva strain VLP in T=4 symmetry
Descriptor: Major capsid protein
Authors:Jung, J, Grant, T, Thomas, D.R, Diehnelt, C.W, Grigorieff, N, Joshua-Tor, L.
Deposit date:2019-05-05
Release date:2019-06-26
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:High-resolution cryo-EM structures of outbreak strain human norovirus shells reveal size variations.
Proc.Natl.Acad.Sci.USA, 116, 2019
6OTF
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BU of 6otf by Molmil
Symmetric reconstruction of human norovirus GII.2 Snow Mountain Virus Strain VLP in T=3 symmetry
Descriptor: Viral protein 1, ZINC ION
Authors:Jung, J, Grant, T, Thomas, D.R, Diehnelt, C.W, Grigorieff, N, Joshua-Tor, L.
Deposit date:2019-05-03
Release date:2019-06-26
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:High-resolution cryo-EM structures of outbreak strain human norovirus shells reveal size variations.
Proc.Natl.Acad.Sci.USA, 116, 2019
4QVH
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BU of 4qvh by Molmil
Crystal structure of the essential Mycobacterium tuberculosis phosphopantetheinyl transferase PptT, solved as a fusion protein with maltose binding protein
Descriptor: CITRATE ANION, COENZYME A, GLYCEROL, ...
Authors:Jung, J, Bashiri, G, Johnston, J.M, Baker, E.N.
Deposit date:2014-07-15
Release date:2014-12-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of the essential Mycobacterium tuberculosis phosphopantetheinyl transferase PptT, solved as a fusion protein with maltose binding protein.
J.Struct.Biol., 188, 2014
1T5N
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BU of 1t5n by Molmil
Structural transitions as determinants of calcium-dependent antibiotic daptomycin
Descriptor: DAPTOMYCIN, DECANOIC ACID
Authors:Jung, D, Rozek, A, Okon, M, Hancock, R.E.
Deposit date:2004-05-04
Release date:2004-08-31
Last modified:2019-11-06
Method:SOLUTION NMR
Cite:Structural Transitions as Determinants of the Action of the Calcium-Dependent Antibiotic Daptomycin.
Chem.Biol., 11, 2004
1S6X
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BU of 1s6x by Molmil
Solution structure of VSTx
Descriptor: KvAP CHANNEL
Authors:Jung, H.J, Eu, Y.J, Kim, J.I.
Deposit date:2004-01-28
Release date:2005-03-22
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Solution structure and lipid membrane partitioning of VSTx1, an inhibitor of the KvAP potassium channel.
Biochemistry, 44, 2005
1RP7
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BU of 1rp7 by Molmil
E. COLI PYRUVATE DEHYDROGENASE INHIBITOR COMPLEX
Descriptor: 2-{3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-4-METHYL-2-OXO-2,3-DIHYDRO-1,3-THIAZOL-5-YL}ETHYL TRIHYDROGEN DIPHOSPHATE, MAGNESIUM ION, Pyruvate dehydrogenase E1 component
Authors:Arjunan, P, Chandrasekhar, K, Furey, W.
Deposit date:2003-12-03
Release date:2004-03-16
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Structural Determinants of Enzyme Binding Affinity: The E1 Component of Pyruvate Dehydrogenase from Escherichia coli in Complex with the Inhibitor Thiamin Thiazolone Diphosphate.
Biochemistry, 43, 2004
1T5M
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BU of 1t5m by Molmil
Structural transitions as determinants of the action of the calcium-dependent antibiotic daptomycin
Descriptor: DAPTOMYCIN, DECANOIC ACID
Authors:Jung, D, Rozek, A, Okon, M, Hancock, R.E.
Deposit date:2004-05-04
Release date:2004-08-31
Last modified:2012-12-12
Method:SOLUTION NMR
Cite:Structural Transitions as Determinants of the Action of the Calcium-Dependent Antibiotic Daptomycin.
Chem.Biol., 11, 2004
2BYC
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BU of 2byc by Molmil
BlrB - a BLUF protein, dark state structure
Descriptor: BLUE-LIGHT RECEPTOR OF THE BLUF-FAMILY, FLAVIN MONONUCLEOTIDE
Authors:Jung, A, Domratcheva, T, Tarutina, M, Wu, Q, Ko, W.H, Shoeman, R.L, Gomelsky, M, Gardner, K.H, Schlichting, I.
Deposit date:2005-07-29
Release date:2005-08-24
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of a Bacterial Bluf Photoreceptor: Insights Into Blue Light-Mediated Signal Transduction.
Proc.Natl.Acad.Sci.USA, 102, 2005
7CMP
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BU of 7cmp by Molmil
parE in complex with AMPPNP
Descriptor: DNA topoisomerase 4 subunit B, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
Authors:Jung, H.Y, Heo, Y.-S.
Deposit date:2020-07-28
Release date:2021-08-04
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.886 Å)
Cite:Crystal structure of parE in complex with AMPPNP
To Be Published
8SKI
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BU of 8ski by Molmil
Crystal structure of human DNA polymerase eta incorporating 5F-dUTP across HX
Descriptor: 2'-deoxy-5-fluorouridine 5'-(tetrahydrogen triphosphate), CALCIUM ION, DNA (5'-D(*AP*GP*TP*GP*TP*GP*AP*G)-3'), ...
Authors:Jung, H.
Deposit date:2023-04-19
Release date:2023-09-20
Method:X-RAY DIFFRACTION (2.163 Å)
Cite:Crystal structure of human DNA polymerase eta incorporating 5F-dUTP across dA
To Be Published
7ABK
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BU of 7abk by Molmil
Helical structure of PspA
Descriptor: Chloroplast membrane-associated 30 kD protein
Authors:Junglas, B, Huber, S.T, Mann, D, Heidler, T, Clarke, M, Schneider, D, Sachse, C.
Deposit date:2020-09-07
Release date:2021-08-04
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:PspA adopts an ESCRT-III-like fold and remodels bacterial membranes.
Cell, 184, 2021
6UQI
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BU of 6uqi by Molmil
Crystal structure of Q38A human DNA polymerase eta bound with 8-oxoadenine (oxoA) and non-hydrolyzable dGTP analog (dGTP*)
Descriptor: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]guanosine, DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*T)-3'), DNA (5'-D(*CP*AP*TP*(A38)P*AP*TP*GP*AP*CP*GP*CP*T)-3'), ...
Authors:Jung, H, Lee, S.
Deposit date:2019-10-19
Release date:2020-10-28
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of Q38A human DNA polymerase eta bound with 8-oxoadenine (oxoA) and non-hydrolyzable dGTP analog (dGTP*)
To Be Published

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PDB entries from 2024-08-07

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