5KO3
 
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5Y3Q
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2FE8
 | | SARS coronavirus papain-like protease: structure of a viral deubiquitinating enzyme | | Descriptor: | BROMIDE ION, Replicase polyprotein 1ab, SULFATE ION, ... | | Authors: | Ratia, K, Santarsiero, B.D, Mesecar, A.D. | | Deposit date: | 2005-12-15 | | Release date: | 2006-03-21 | | Last modified: | 2024-02-14 | | Method: | X-RAY DIFFRACTION (1.85 Å) | | Cite: | Severe acute respiratory syndrome coronavirus papain-like protease: Structure of a viral deubiquitinating enzyme
Proc.Natl.Acad.Sci.Usa, 103, 2006
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3E9S
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7YBG
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6L5T
 | | The crystal structure of SADS-CoV Papain Like protease | | Descriptor: | Peptidase C16, ZINC ION | | Authors: | Fan, C.P. | | Deposit date: | 2019-10-24 | | Release date: | 2020-04-08 | | Last modified: | 2024-03-27 | | Method: | X-RAY DIFFRACTION (1.72 Å) | | Cite: | Structural and biochemical characterization of SADS-CoV papain-like protease 2.
Protein Sci., 29, 2020
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9VWY
 | | Crystal structure of C270S mutant of Papain-like protease (PLpro) from SARS-CoV-2 | | Descriptor: | CHLORIDE ION, GLYCEROL, PHOSPHATE ION, ... | | Authors: | Arya, R, Ganesh, J, Prashar, V, Kumar, M. | | Deposit date: | 2025-07-17 | | Release date: | 2025-07-30 | | Method: | X-RAY DIFFRACTION (1.83 Å) | | Cite: | Crystal structure of C270S mutant of Papain-like protease (PLpro) from SARS-CoV-2
To Be Published
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9VAO
 | | Crystal structure of Papain-like protease (PLpro) from SARS-CoV-2 | | Descriptor: | GLYCEROL, PHOSPHATE ION, Papain-like protease nsp3, ... | | Authors: | Arya, R, Ganesh, J, Prashar, V, Kumar, M. | | Deposit date: | 2025-06-03 | | Release date: | 2025-06-18 | | Method: | X-RAY DIFFRACTION (1.82 Å) | | Cite: | Crystal structure of Papain-like protease (PLpro) from SARS-CoV-2
To Be Published
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7TZJ
 | | SARS CoV-2 PLpro in complex with inhibitor 3k | | Descriptor: | DIMETHYL SULFOXIDE, N-[(3-fluorophenyl)methyl]-1-[(1R)-1-naphthalen-1-ylethyl]piperidine-4-carboxamide, Papain-like protease, ... | | Authors: | Calleja, D.J, Klemm, T, Lechtenberg, B.C, Kuchel, N.W, Lessene, G, Komander, D. | | Deposit date: | 2022-02-15 | | Release date: | 2022-03-02 | | Last modified: | 2023-10-18 | | Method: | X-RAY DIFFRACTION (2.66 Å) | | Cite: | Insights Into Drug Repurposing, as Well as Specificity and Compound Properties of Piperidine-Based SARS-CoV-2 PLpro Inhibitors.
Front Chem, 10, 2022
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3MJ5
 | | Severe Acute Respiratory Syndrome-Coronavirus Papain-Like Protease Inhibitors: Design, Synthesis, Protein-Ligand X-ray Structure and Biological Evaluation | | Descriptor: | N-(1,3-benzodioxol-5-ylmethyl)-1-[(1R)-1-naphthalen-1-ylethyl]piperidine-4-carboxamide, Replicase polyprotein 1a, ZINC ION | | Authors: | Mesecar, A.D, Ratia, K.M, Pegan, S.D. | | Deposit date: | 2010-04-12 | | Release date: | 2010-06-30 | | Last modified: | 2024-11-20 | | Method: | X-RAY DIFFRACTION (2.63 Å) | | Cite: | Severe acute respiratory syndrome coronavirus papain-like novel protease inhibitors: design, synthesis, protein-ligand X-ray structure and biological evaluation
J.Med.Chem., 53, 2010
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3MP2
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8IHO
 | | Crystal structures of SARS-CoV-2 papain-like protease in complex with covalent inhibitors | | Descriptor: | Papain-like protease nsp3, ZINC ION, covalent inhibitor | | Authors: | Wang, Q, Hu, H, Li, M, Xu, Y. | | Deposit date: | 2023-02-23 | | Release date: | 2024-01-03 | | Last modified: | 2024-11-20 | | Method: | X-RAY DIFFRACTION (2.55 Å) | | Cite: | Structure-Based Design of Potent Peptidomimetic Inhibitors Covalently Targeting SARS-CoV-2 Papain-like Protease.
Int J Mol Sci, 24, 2023
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6NOZ
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8EUA
 | | Structure of SARS-CoV2 PLpro bound to a covalent inhibitor | | Descriptor: | Papain-like protease nsp3, SULFATE ION, ZINC ION, ... | | Authors: | Mathews, I.I, Pokhrel, S, Wakatsuki, S. | | Deposit date: | 2022-10-18 | | Release date: | 2023-04-05 | | Last modified: | 2024-11-06 | | Method: | X-RAY DIFFRACTION (3.1 Å) | | Cite: | Potent and selective covalent inhibition of the papain-like protease from SARS-CoV-2.
Nat Commun, 14, 2023
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8JUX
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8FWN
 | | Crystal structure of SARS-CoV-2 papain-like protease C111S mutant | | Descriptor: | ACETATE ION, CHLORIDE ION, GLYCEROL, ... | | Authors: | Bezerra, E.H.S, Soprano, A.S, Tonoli, C.C.C, Prado, P.F.V, da Silva, J.C, Franchini, K.G, Trivella, D.B.B, Benedetti, C.E. | | Deposit date: | 2023-01-23 | | Release date: | 2023-05-17 | | Last modified: | 2023-10-25 | | Method: | X-RAY DIFFRACTION (1.5 Å) | | Cite: | Crystal structure of SARS-CoV-2 papain-like protease C111S mutant
To Be Published
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6XG3
 | | The crystal structure of Papain-Like Protease of SARS CoV-2 , C111S mutant, at room temperature | | Descriptor: | CHLORIDE ION, Non-structural protein 3, PHOSPHATE ION, ... | | Authors: | Osipiuk, J, Tesar, C, Jedrzejczak, R, Endres, M, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID) | | Deposit date: | 2020-06-16 | | Release date: | 2020-06-24 | | Last modified: | 2023-10-18 | | Method: | X-RAY DIFFRACTION (2.48 Å) | | Cite: | Structure of papain-like protease from SARS-CoV-2 and its complexes with non-covalent inhibitors.
Nat Commun, 12, 2021
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8FWO
 | | Crystal structure of SARS-CoV-2 papain-like protease | | Descriptor: | CHLORIDE ION, GLYCEROL, PHOSPHATE ION, ... | | Authors: | Bezerra, E.H.S, Soprano, A.S, Tonoli, C.C.C, Prado, P.F.V, da Silva, J.C, Franchini, K.G, Trivella, D.B.B, Benedetti, C.E. | | Deposit date: | 2023-01-23 | | Release date: | 2024-01-31 | | Method: | X-RAY DIFFRACTION (1.8 Å) | | Cite: | Crystal structure of SARS-CoV-2 papain-like protease
To Be Published
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8G62
 | | Papain-Like Protease of SARS CoV-2 in complex with remodilin NCGC 390004 | | Descriptor: | 3-methoxy-5-(1-methylpiperidin-4-yl)-N-[4-(pyrrolidine-1-sulfonyl)phenyl]benzamide, ACETATE ION, CHLORIDE ION, ... | | Authors: | Osipiuk, J, Tesar, C, Endres, M, Jedrzejczak, R, Luci, D, Kales, S, Simeonov, A, Rai, G, Drayman, N, Tay, S, Oakes, S, Rosner, M, Chen, B, Dulin, N, Solway, J, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID), Center for Structural Biology of Infectious Diseases (CSBID) | | Deposit date: | 2023-02-14 | | Release date: | 2023-02-22 | | Last modified: | 2024-05-22 | | Method: | X-RAY DIFFRACTION (2.17 Å) | | Cite: | Papain-Like Protease of SARS CoV-2 in complex with remodilin NCGC 390004
To Be Published
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9HHG
 | | A rare open conformation for Ubl2 domain of papain-like protease of SARS-CoV2 | | Descriptor: | CHLORIDE ION, GLYCEROL, Papain-like protease nsp3, ... | | Authors: | Freiherr von Scholley, G.L, Schaefer, M, Soler Lopez, M, Hillig, R, Mueller-Dieckmann, C, Kandiah, E. | | Deposit date: | 2024-11-21 | | Release date: | 2025-12-03 | | Method: | X-RAY DIFFRACTION (1.95 Å) | | Cite: | A rare open conformation for Ubl2 domain of papain-like protease of SARS-CoV2
To Be Published
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9HHI
 | | A rare open conformation for Ubl2 domain of papain-like protease without zinc of SARS-CoV2 | | Descriptor: | CHLORIDE ION, GLYCEROL, Papain-like protease nsp3, ... | | Authors: | Freiherr von Scholley, G.L, Schaefer, M, Soler Lopez, M, Hillig, R, Mueller-Dieckmann, C, Kandiah, E. | | Deposit date: | 2024-11-21 | | Release date: | 2025-12-03 | | Method: | X-RAY DIFFRACTION (2.7 Å) | | Cite: | A rare open conformation for Ubl2 domain of papain-like protease of SARS-CoV2
To Be Published
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9HHH
 | | A rare open conformation for Ubl2 domain of papain-like protease C111S of SARS-CoV2 | | Descriptor: | GLYCEROL, Papain-like protease nsp3, SULFATE ION, ... | | Authors: | Freiherr von Scholley, G.L, Schaefer, M, Soler Lopez, M, Hillig, R, Mueller-Dieckmann, C, Kandiah, E. | | Deposit date: | 2024-11-21 | | Release date: | 2025-12-10 | | Method: | X-RAY DIFFRACTION (1.98 Å) | | Cite: | A rare open conformation for Ubl2 domain of papain-like protease of SARS-CoV2
To Be Published
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4X2Z
 | | Structural view and substrate specificity of papain-like protease from Avian Infectious Bronchitis Virus | | Descriptor: | Nonstructural protein 3, ZINC ION | | Authors: | Kong, L, Shaw, N, Yan, L, Lou, Z, Rao, Z. | | Deposit date: | 2014-11-27 | | Release date: | 2015-01-28 | | Last modified: | 2024-11-13 | | Method: | X-RAY DIFFRACTION (2.15 Å) | | Cite: | Structural View and Substrate Specificity of Papain-like Protease from Avian Infectious Bronchitis Virus.
J.Biol.Chem., 290, 2015
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4OW0
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8YX3
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