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PDB: 316 results

7MC1
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BU of 7mc1 by Molmil
Solution structure of Miz-1 Zinc finger 10
Descriptor: Isoform 2 of Zinc finger and BTB domain-containing protein 17, ZINC ION
Authors:Boisvert, O, Lavigne, P.
Deposit date:2021-04-01
Release date:2021-04-28
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Zinc Fingers 10 and 11 of Miz-1 undergo conformational exchange to achieve specific DNA binding.
Structure, 30, 2022
7MC2
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BU of 7mc2 by Molmil
Solution structure of Miz-1 Zinc finger 11 H586Y
Descriptor: Isoform 2 of Zinc finger and BTB domain-containing protein 17, ZINC ION
Authors:Boisvert, O, Lavigne, P.
Deposit date:2021-04-01
Release date:2021-04-28
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Zinc Fingers 10 and 11 of Miz-1 undergo conformational exchange to achieve specific DNA binding.
Structure, 30, 2022
1ZNF
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BU of 1znf by Molmil
THREE-DIMENSIONAL SOLUTION STRUCTURE OF A SINGLE ZINC FINGER DNA-BINDING DOMAIN
Descriptor: 31ST ZINC FINGER FROM XFIN, ZINC ION
Authors:Lee, M.S, Gippert, G.P, Soman, K.V, Case, D.A, Wright, P.E.
Deposit date:1989-09-25
Release date:1991-07-15
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Three-dimensional solution structure of a single zinc finger DNA-binding domain.
Science, 245, 1989
1ZAA
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BU of 1zaa by Molmil
ZINC FINGER-DNA RECOGNITION: CRYSTAL STRUCTURE OF A ZIF268-DNA COMPLEX AT 2.1 ANGSTROMS
Descriptor: DNA (5'-D(*AP*GP*CP*GP*TP*GP*GP*GP*CP*GP*T)-3'), DNA (5'-D(*TP*AP*CP*GP*CP*CP*CP*AP*CP*GP*C)-3'), PROTEIN (ZIF268), ...
Authors:Pavletich, N.P, Pabo, C.O.
Deposit date:1992-09-17
Release date:1993-10-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Zinc finger-DNA recognition: crystal structure of a Zif268-DNA complex at 2.1 A.
Science, 252, 1991
1ZFD
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BU of 1zfd by Molmil
SWI5 ZINC FINGER DOMAIN 2, NMR, 45 STRUCTURES
Descriptor: SWI5, ZINC ION
Authors:Neuhaus, D, Nakaseko, Y, Schwabe, J.W.R, Rhodes, D, Klug, A.
Deposit date:1996-04-04
Release date:1996-10-14
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structures of two zinc-finger domains from SWI5 obtained using two-dimensional 1H nuclear magnetic resonance spectroscopy. A zinc-finger structure with a third strand of beta-sheet.
J.Mol.Biol., 228, 1992
1X6E
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BU of 1x6e by Molmil
Solution structures of the C2H2 type zinc finger domain of human Zinc finger protein 24
Descriptor: ZINC ION, Zinc finger protein 24
Authors:Sato, M, Tomizawa, T, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-05-17
Release date:2005-11-17
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structures of the C2H2 type zinc finger domain of human Zinc finger protein 24
To be Published
7N5U
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ZBTB7A Zinc Finger Domain Bound to DNA Duplex Containing GGACCC (Oligo 21)
Descriptor: DNA Strain II, DNA Strand I, ZINC ION, ...
Authors:Horton, J.R, Ren, R, Cheng, X.
Deposit date:2021-06-06
Release date:2022-06-08
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.86 Å)
Cite:Structural basis for transcription factor ZBTB7A recognition of DNA and effects of ZBTB7A somatic mutations that occur in human acute myeloid leukemia.
J.Biol.Chem., 299, 2023
7N5W
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BU of 7n5w by Molmil
ZBTB7A Zinc Finger Domain Bound to DNA Duplex Containing GGACCC (Oligo 23)
Descriptor: 1,2-ETHANEDIOL, DNA Strand I, DNA Strand II, ...
Authors:Horton, J.R, Ren, R, Cheng, X.
Deposit date:2021-06-06
Release date:2022-06-08
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Structural basis for transcription factor ZBTB7A recognition of DNA and effects of ZBTB7A somatic mutations that occur in human acute myeloid leukemia.
J.Biol.Chem., 299, 2023
7N5V
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ZBTB7A Zinc Finger Domain Bound to DNA Duplex Containing GGACCC (Oligo 20)
Descriptor: DNA Strand I, DNA Strand II, ZINC ION, ...
Authors:Horton, J.R, Ren, R, Cheng, X.
Deposit date:2021-06-06
Release date:2022-06-08
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.08 Å)
Cite:Structural basis for transcription factor ZBTB7A recognition of DNA and effects of ZBTB7A somatic mutations that occur in human acute myeloid leukemia.
J.Biol.Chem., 299, 2023
1XF7
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BU of 1xf7 by Molmil
High Resolution NMR Structure of the Wilms' Tumor Suppressor Protein (WT1) Finger 3
Descriptor: Wilms' Tumor Protein, ZINC ION
Authors:Lachenmann, M.J, Ladbury, J.E, Dong, J, Huang, K, Carey, P, Weiss, M.A.
Deposit date:2004-09-14
Release date:2004-12-14
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Why zinc fingers prefer zinc: ligand-field symmetry and the hidden thermodynamics of metal ion selectivity
Biochemistry, 43, 2004
2ADR
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BU of 2adr by Molmil
ADR1 DNA-BINDING DOMAIN FROM SACCHAROMYCES CEREVISIAE, NMR, 25 STRUCTURES
Descriptor: ADR1, ZINC ION
Authors:Bowers, P.M, Kleivt, R.E.
Deposit date:1998-03-20
Release date:1998-06-17
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:A folding transition and novel zinc finger accessory domain in the transcription factor ADR1.
Nat.Struct.Biol., 6, 1999
1SP2
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BU of 1sp2 by Molmil
NMR STRUCTURE OF A ZINC FINGER DOMAIN FROM TRANSCRIPTION FACTOR SP1F2, MINIMIZED AVERAGE STRUCTURE
Descriptor: SP1F2, ZINC ION
Authors:Narayan, V.A, Kriwacki, R.W, Caradonna, J.P.
Deposit date:1996-11-21
Release date:1997-04-21
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structures of zinc finger domains from transcription factor Sp1. Insights into sequence-specific protein-DNA recognition.
J.Biol.Chem., 272, 1997
1SP1
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BU of 1sp1 by Molmil
NMR STRUCTURE OF A ZINC FINGER DOMAIN FROM TRANSCRIPTION FACTOR SP1F3, MINIMIZED AVERAGE STRUCTURE
Descriptor: SP1F3, ZINC ION
Authors:Narayan, V.A, Kriwacki, R.W, Caradonna, J.P.
Deposit date:1996-11-21
Release date:1997-04-21
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structures of zinc finger domains from transcription factor Sp1. Insights into sequence-specific protein-DNA recognition.
J.Biol.Chem., 272, 1997
1U85
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BU of 1u85 by Molmil
ARG326-TRP mutant of the third zinc finger of BKLF
Descriptor: Kruppel-like factor 3, ZINC ION
Authors:Cram, E.D, Mackay, J.P, Matthews, J.M.
Deposit date:2004-08-05
Release date:2005-08-23
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structures of tryptophan-containing CCHH zinc finger mutants
To be Published
1U86
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BU of 1u86 by Molmil
321-TW-322 insertion mutant of the third zinc finger of BKLF
Descriptor: Kruppel-like factor 3, ZINC ION
Authors:Cram, E.D, Mackay, J.P, Matthews, J.M.
Deposit date:2004-08-05
Release date:2005-08-23
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structures of tryptophan-containing CCHH zinc finger mutants
To be Published
1VA2
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BU of 1va2 by Molmil
Solution Structure of Transcription Factor Sp1 DNA Binding Domain (Zinc Finger 2)
Descriptor: Transcription factor Sp1, ZINC ION
Authors:Oka, S, Shiraishi, Y, Yoshida, T, Ohkubo, T, Sugiura, Y, Kobayashi, Y.
Deposit date:2004-02-07
Release date:2005-02-08
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:NMR structure of transcription factor Sp1 DNA binding domain
Biochemistry, 43, 2004
1TF6
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BU of 1tf6 by Molmil
CO-CRYSTAL STRUCTURE OF XENOPUS TFIIIA ZINC FINGER DOMAIN BOUND TO THE 5S RIBOSOMAL RNA GENE INTERNAL CONTROL REGION
Descriptor: DNA (5'-D(*AP*CP*GP*GP*GP*CP*CP*TP*GP*GP*TP*TP*AP*GP*TP*AP*C P*CP*TP*GP*GP*AP* TP*GP*GP*GP*AP*GP*AP*CP*C)-3'), DNA (5'-D(*TP*GP*GP*TP*CP*TP*CP*CP*CP*AP*TP*CP*CP*AP*GP*GP*T P*AP*CP*TP*AP*AP* CP*CP*AP*GP*GP*CP*CP*CP*G)-3'), PROTEIN (TRANSCRIPTION FACTOR IIIA), ...
Authors:Nolte, R.T, Conlin, R.M, Harrison, S.C, Brown, R.S.
Deposit date:1998-03-02
Release date:1998-07-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Differing roles for zinc fingers in DNA recognition: structure of a six-finger transcription factor IIIA complex.
Proc.Natl.Acad.Sci.USA, 95, 1998
1VA3
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BU of 1va3 by Molmil
Solution Structure of Transcription Factor Sp1 DNA Binding Domain (Zinc Finger 3)
Descriptor: Transcription factor Sp1, ZINC ION
Authors:Oka, S, Shiraishi, Y, Yoshida, T, Ohkubo, T, Sugiura, Y, Kobayashi, Y.
Deposit date:2004-02-07
Release date:2005-02-08
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:NMR structure of transcription factor Sp1 DNA binding domain
Biochemistry, 43, 2004
1TF3
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BU of 1tf3 by Molmil
TFIIIA FINGER 1-3 BOUND TO DNA, NMR, 22 STRUCTURES
Descriptor: 5S RNA GENE, TRANSCRIPTION FACTOR IIIA, ZINC ION
Authors:Foster, M.P, Wuttke, D.S, Radhakrishnan, I, Case, D.A, Gottesfeld, J.M, Wright, P.E.
Deposit date:1997-07-01
Release date:1997-09-17
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Domain packing and dynamics in the DNA complex of the N-terminal zinc fingers of TFIIIA.
Nat.Struct.Biol., 4, 1997
1UBD
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BU of 1ubd by Molmil
CO-CRYSTAL STRUCTURE OF HUMAN YY1 ZINC FINGER DOMAIN BOUND TO THE ADENO-ASSOCIATED VIRUS P5 INITIATOR ELEMENT
Descriptor: DNA (5'-D(*AP*GP*GP*GP*TP*CP*TP*CP*CP*AP*TP*TP*TP*TP*GP*AP*A P*GP*CP*G)-3'), DNA (5'-D(*CP*GP*CP*TP*TP*CP*AP*AP*AP*AP*TP*GP*GP*AP*GP*AP*C P*CP*CP*T)-3'), PROTEIN (YY1 ZINC FINGER DOMAIN), ...
Authors:Houbaviy, H.B, Usheva, A, Shenk, T, Burley, S.K.
Deposit date:1996-10-04
Release date:1996-12-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Cocrystal structure of YY1 bound to the adeno-associated virus P5 initiator.
Proc.Natl.Acad.Sci.USA, 93, 1996
1UN6
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THE CRYSTAL STRUCTURE OF A ZINC FINGER - RNA COMPLEX REVEALS TWO MODES OF MOLECULAR RECOGNITION
Descriptor: 5S RIBOSOMAL RNA, MAGNESIUM ION, TRANSCRIPTION FACTOR IIIA, ...
Authors:Lu, D, Searles, M.A, Klug, A.
Deposit date:2003-09-04
Release date:2003-11-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal Structure of a Zinc-Finger-RNA Complex Reveals Two Modes of Molecular Recognition
Nature, 426, 2003
1A1F
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DSNR (ZIF268 VARIANT) ZINC FINGER-DNA COMPLEX (GACC SITE)
Descriptor: DNA (5'-D(*AP*GP*CP*GP*TP*GP*GP*GP*AP*CP*C)-3'), DNA (5'-D(*TP*GP*GP*TP*CP*CP*CP*AP*CP*GP*C)-3'), THREE-FINGER ZIF268 PEPTIDE, ...
Authors:Elrod-Erickson, M, Benson, T.E, Pabo, C.O.
Deposit date:1997-12-10
Release date:1998-06-10
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:High-resolution structures of variant Zif268-DNA complexes: implications for understanding zinc finger-DNA recognition.
Structure, 6, 1998
1A1J
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BU of 1a1j by Molmil
RADR (ZIF268 VARIANT) ZINC FINGER-DNA COMPLEX (GCGT SITE)
Descriptor: DNA (5'-D(*AP*GP*CP*GP*TP*GP*GP*GP*CP*GP*T)-3'), DNA (5'-D(*TP*AP*CP*GP*CP*CP*CP*AP*CP*GP*C)-3'), PROTEIN (RADR ZIF268 ZINC FINGER PEPTIDE), ...
Authors:Elrod-Erickson, M, Benson, T.E, Pabo, C.O.
Deposit date:1997-12-10
Release date:1998-06-17
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:High-resolution structures of variant Zif268-DNA complexes: implications for understanding zinc finger-DNA recognition.
Structure, 6, 1998
1A1H
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BU of 1a1h by Molmil
QGSR (ZIF268 VARIANT) ZINC FINGER-DNA COMPLEX (GCAC SITE)
Descriptor: DNA (5'-D(*AP*GP*CP*GP*TP*GP*GP*GP*CP*AP*C)-3'), DNA (5'-D(*TP*GP*TP*GP*CP*CP*CP*AP*CP*GP*C)-3'), QGSR ZINC FINGER PEPTIDE, ...
Authors:Elrod-Erickson, M, Benson, T.E, Pabo, C.O.
Deposit date:1997-12-10
Release date:1998-06-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:High-resolution structures of variant Zif268-DNA complexes: implications for understanding zinc finger-DNA recognition.
Structure, 6, 1998
1ARE
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BU of 1are by Molmil
STRUCTURES OF DNA-BINDING MUTANT ZINC FINGER DOMAINS: IMPLICATIONS FOR DNA BINDING
Descriptor: YEAST TRANSCRIPTION FACTOR ADR1, ZINC ION
Authors:Hoffman, R.C, Xu, R.X, Horvath, S.J, Herriott, J.R, Klevit, R.E.
Deposit date:1993-10-01
Release date:1994-01-31
Last modified:2024-04-10
Method:SOLUTION NMR
Cite:Structures of DNA-binding mutant zinc finger domains: implications for DNA binding.
Protein Sci., 2, 1993

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