Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 324 results

4NPD
DownloadVisualize
BU of 4npd by Molmil
High-resolution structure of C domain of staphylococcal protein A at cryogenic temperature
Descriptor: Immunoglobulin G-binding protein A, THIOCYANATE ION, ZINC ION
Authors:Deis, L.N, Pemble IV, C.W, Oas, T.G, Richardson, J.S, Richardson, D.C.
Deposit date:2013-11-21
Release date:2014-10-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (0.9 Å)
Cite:Multiscale conformational heterogeneity in staphylococcal protein a: possible determinant of functional plasticity.
Structure, 22, 2014
8DA5
DownloadVisualize
BU of 8da5 by Molmil
Coevolved affibody-Z domain pair LL1.c4
Descriptor: GLYCEROL, Immunoglobulin G-binding protein A, affibody LL1.FIVM
Authors:Jude, K.M, Yang, A, Garcia, K.C.
Deposit date:2022-06-13
Release date:2023-07-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1 Å)
Cite:Deploying synthetic coevolution and machine learning to engineer protein-protein interactions.
Science, 381, 2023
8DA7
DownloadVisualize
BU of 8da7 by Molmil
Coevolved affibody-Z domain pair LL1.c6
Descriptor: Immunoglobulin G-binding protein A, MALONATE ION, affibody LL1.FIFV
Authors:Jude, K.M, Yang, A, Garcia, K.C.
Deposit date:2022-06-13
Release date:2023-07-26
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.02 Å)
Cite:Deploying synthetic coevolution and machine learning to engineer protein-protein interactions.
Science, 381, 2023
8DA3
DownloadVisualize
BU of 8da3 by Molmil
Coevolved affibody-Z domain pair LL1.c1
Descriptor: Affibody LL1.FILF, Immunoglobulin G-binding protein A, MALONATE ION, ...
Authors:Jude, K.M, Yang, A, Garcia, K.C.
Deposit date:2022-06-13
Release date:2023-07-26
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.06 Å)
Cite:Deploying synthetic coevolution and machine learning to engineer protein-protein interactions.
Science, 381, 2023
8DAB
DownloadVisualize
BU of 8dab by Molmil
Coevolved affibody-Z domain pair LL2.c17
Descriptor: Affibody LL2.IVVY, Immunoglobulin G-binding protein A
Authors:Jude, K.M, Yang, A, Garcia, K.C.
Deposit date:2022-06-13
Release date:2023-07-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.134 Å)
Cite:Deploying synthetic coevolution and machine learning to engineer protein-protein interactions.
Science, 381, 2023
8DAC
DownloadVisualize
BU of 8dac by Molmil
Coevolved affibody-Z domain pair LL2.c22
Descriptor: Affibody LL2.FILV, GLYCEROL, Immunoglobulin G-binding protein A
Authors:Jude, K.M, Yang, A, Garcia, K.C.
Deposit date:2022-06-13
Release date:2023-07-26
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:Deploying synthetic coevolution and machine learning to engineer protein-protein interactions.
Science, 381, 2023
7BF1
DownloadVisualize
BU of 7bf1 by Molmil
Ca2+-Calmodulin in complex with peptide from brain-type creatine kinase in extended 1:2 binding mode
Descriptor: ACETYL GROUP, CALCIUM ION, Calmodulin-1, ...
Authors:Sprenger, J, Akerfeldt, K.S, Bredfelt, J, Patel, N, Rowlett, R, Trifan, A, Vanderbeck, A, Lo Leggio, L, Snogerup Linse, S.
Deposit date:2020-12-31
Release date:2021-07-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:Calmodulin complexes with brain and muscle creatine kinase peptides.
Curr Res Struct Biol, 3, 2021
6XXX
DownloadVisualize
BU of 6xxx by Molmil
1.25 Angstrom crystal structure of Ca/CaM A102V:RyR2 peptide complex
Descriptor: CALCIUM ION, Calmodulin-1, LYS-LYS-ALA-VAL-TRP-HIS-LYS-LEU-LEU-SER-LYS-GLN-ARG-LYS-ARG-ALA-VAL-VAL-ALA-CYS-PHE
Authors:Antonyuk, S, Helassa, N.
Deposit date:2020-01-28
Release date:2021-02-10
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:CPVT-associated calmodulin variants N53I and A102V dysregulate Ca2+ signalling via different mechanisms.
J.Cell.Sci., 135, 2022
8DA8
DownloadVisualize
BU of 8da8 by Molmil
Coevolved affibody-Z domain pair LL2.c1
Descriptor: Affibody LL2.FIIK, GLYCEROL, Immunoglobulin G-binding protein A
Authors:Jude, K.M, Yang, A, Garcia, K.C.
Deposit date:2022-06-13
Release date:2023-07-26
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:Deploying synthetic coevolution and machine learning to engineer protein-protein interactions.
Science, 381, 2023
8DA9
DownloadVisualize
BU of 8da9 by Molmil
Coevolved affibody-Z domain pair LL2.c3
Descriptor: Affibody LL2.FIIV, GLYCEROL, Immunoglobulin G-binding protein A, ...
Authors:Jude, K.M, Yang, A, Garcia, K.C.
Deposit date:2022-06-13
Release date:2023-07-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Deploying synthetic coevolution and machine learning to engineer protein-protein interactions.
Science, 381, 2023
4DJC
DownloadVisualize
BU of 4djc by Molmil
1.35 A crystal structure of the NaV1.5 DIII-IV-Ca/CaM complex
Descriptor: CALCIUM ION, Calmodulin, ISOPROPYL ALCOHOL, ...
Authors:Sarhan, M.F, Tung, C.-C, Van Petegem, F, Ahern, C.A.
Deposit date:2012-02-01
Release date:2012-02-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Crystallographic basis for calcium regulation of sodium channels.
Proc.Natl.Acad.Sci.USA, 109, 2012
4NPE
DownloadVisualize
BU of 4npe by Molmil
High-resolution structure of C domain of staphylococcal protein A at room temperature
Descriptor: Immunoglobulin G-binding protein A, THIOCYANATE ION, ZINC ION
Authors:Deis, L.N, Pemble IV, C.W, Oas, T.G, Richardson, J.S, Richardson, D.C.
Deposit date:2013-11-21
Release date:2014-10-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Multiscale conformational heterogeneity in staphylococcal protein a: possible determinant of functional plasticity.
Structure, 22, 2014
7BF2
DownloadVisualize
BU of 7bf2 by Molmil
Ca2+-Calmodulin in complex with human muscle form creatine kinase peptide in extended 1:2 binding mode
Descriptor: CALCIUM ION, Calmodulin-1, Creatine kinase M-type
Authors:Sprenger, J, Akerfeldt, K.S, Bredfelt, J, Patel, N, Rowlett, R, Trifan, A, Vanderbeck, A, Lo Leggio, L, Snogerup Linse, S.
Deposit date:2020-12-31
Release date:2021-07-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Calmodulin complexes with brain and muscle creatine kinase peptides.
Curr Res Struct Biol, 3, 2021
2W73
DownloadVisualize
BU of 2w73 by Molmil
High-resolution structure of the complex between calmodulin and a peptide from calcineurin A
Descriptor: CALCIUM ION, CALMODULIN, SERINE/THREONINE-PROTEIN PHOSPHATASE 2B CATALYTIC SUBUNIT ALPHA ISOFORM
Authors:Majava, V, Kursula, P.
Deposit date:2008-12-19
Release date:2009-05-12
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Domain Swapping and Different Oligomeric States for the Complex between Calmodulin and the Calmodulin-Binding Domain of Calcineurin A
Plos One, 4, 2009
2F3Y
DownloadVisualize
BU of 2f3y by Molmil
Calmodulin/IQ domain complex
Descriptor: CALCIUM ION, Calmodulin, MAGNESIUM ION, ...
Authors:Fallon, J.L, Quiocho, F.A.
Deposit date:2005-11-22
Release date:2005-12-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structure of Calmodulin Bound to the Hydrophobic IQ Domain of the Cardiac Ca(v)1.2 Calcium Channel.
Structure, 13, 2005
4NPF
DownloadVisualize
BU of 4npf by Molmil
High-resolution structure of two tandem B domains of staphylococcal protein A connected by the conserved linker
Descriptor: Immunoglobulin G-binding protein A
Authors:Deis, L.N, Pemble IV, C.W, Oas, T.G, Richardson, J.S, Richardson, D.C.
Deposit date:2013-11-21
Release date:2014-10-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Multiscale conformational heterogeneity in staphylococcal protein a: possible determinant of functional plasticity.
Structure, 22, 2014
4LZX
DownloadVisualize
BU of 4lzx by Molmil
Complex of IQCG and Ca2+-free CaM
Descriptor: Calmodulin, IQ domain-containing protein G, SULFATE ION
Authors:Liang, W.X, Chen, L.T, Chen, Z, Chen, S.J, Chen, S.
Deposit date:2013-08-01
Release date:2014-05-07
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Functional and molecular features of the calmodulin-interacting protein IQCG required for haematopoiesis in zebrafish
Nat Commun, 5, 2014
8DA6
DownloadVisualize
BU of 8da6 by Molmil
Coevolved affibody-Z domain pair LL1.c5
Descriptor: Affibody LL1.FIIM, Immunoglobulin G-binding protein A
Authors:Jude, K.M, Yang, A, Garcia, K.C.
Deposit date:2022-06-13
Release date:2023-07-26
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Deploying synthetic coevolution and machine learning to engineer protein-protein interactions.
Science, 381, 2023
5V03
DownloadVisualize
BU of 5v03 by Molmil
A positive allosteric modulator binding pocket in SK2 ion channels is shared by Riluzole and CyPPA
Descriptor: CALCIUM ION, Calmodulin, N-(4-chlorophenyl)-2-(3,5-dimethyl-1H-pyrazol-1-yl)pyrimidin-4-amine, ...
Authors:Liu, S.
Deposit date:2017-02-28
Release date:2018-03-07
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:An Intracellular Allosteric Modulator Binding Pocket in SK2 Ion Channels Is Shared by Multiple Chemotypes.
Structure, 26, 2018
2F3Z
DownloadVisualize
BU of 2f3z by Molmil
Calmodulin/IQ-AA domain complex
Descriptor: CALCIUM ION, Calmodulin, Voltage-dependent L-type calcium channel alpha-1C subunit
Authors:Fallon, J.L, Quiocho, F.A.
Deposit date:2005-11-22
Release date:2005-12-27
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure of Calmodulin Bound to the Hydrophobic IQ Domain of the Cardiac Ca(v)1.2 Calcium Channel.
Structure, 13, 2005
6M7H
DownloadVisualize
BU of 6m7h by Molmil
Structure of calmodulin with KN93
Descriptor: CALCIUM ION, Calmodulin-1, N-[2-[[[3-(4'-Chlorophenyl)-2-propenyl]methylamino]methyl]phenyl]-N-(2-hydroxyethyl)-4'-methoxybenzenesulfonamide
Authors:Damo, S.M, Pattanayek, R, Johnson, C.N.
Deposit date:2018-08-20
Release date:2019-08-28
Last modified:2019-11-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The CaMKII inhibitor KN93-calmodulin interaction and implications for calmodulin tuning of NaV1.5 and RyR2 function.
Cell Calcium, 82, 2019
8CPL
DownloadVisualize
BU of 8cpl by Molmil
YZw2 a scaffold for cryo-EM of small proteins of interest
Descriptor: PYRIDOXAL-5'-PHOSPHATE, Putrescine aminotransferase,Immunoglobulin G-binding protein A
Authors:Moche, M, Friberg, O, Nygren, P.A, Nilvebrant, J.
Deposit date:2023-03-03
Release date:2024-06-12
Method:X-RAY DIFFRACTION (1.605 Å)
Cite:Engineered imaging scaffolds for cryo-EM of small proteins of interest.
To Be Published
6U3A
DownloadVisualize
BU of 6u3a by Molmil
1.65 Angstrom crystal structure of the N97S Ca-CaM:CaV1.2 IQ domain complex
Descriptor: CALCIUM ION, Calmodulin-1, SODIUM ION, ...
Authors:Wang, K, Van Petegem, F.
Deposit date:2019-08-21
Release date:2020-02-19
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Arrhythmia mutations in calmodulin can disrupt cooperativity of Ca2+binding and cause misfolding.
J. Physiol. (Lond.), 598, 2020
7KL5
DownloadVisualize
BU of 7kl5 by Molmil
Structure of Calmodulin Bound to the Cardiac Ryanodine Receptor (RyR2) at Residues: Phe4246 to Val4271
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Calmodulin-1, ...
Authors:Fisher, A.J, Ames, J.B, Yu, Q.
Deposit date:2020-10-29
Release date:2021-04-07
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:The Crystal Structure of Calmodulin Bound to the Cardiac Ryanodine Receptor (RyR2) at Residues Phe4246-Val4271 Reveals a Fifth Calcium Binding Site.
Biochemistry, 60, 2021
6DAD
DownloadVisualize
BU of 6dad by Molmil
1.65 Angstrom crystal structure of the N97I Ca/CaM:CaV1.2 IQ domain complex
Descriptor: CALCIUM ION, Calmodulin-1, Voltage-dependent L-type calcium channel subunit alpha-1C
Authors:Wang, K, Van Petegem, F.
Deposit date:2018-05-01
Release date:2018-10-17
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Arrhythmia mutations in calmodulin cause conformational changes that affect interactions with the cardiac voltage-gated calcium channel.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018

223166

PDB entries from 2024-07-31

PDB statisticsPDBj update infoContact PDBjnumon