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PDB: 26 results

1XO0
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BU of 1xo0 by Molmil
High resolution structure of the holliday junction intermediate in cre-loxp site-specific recombination
Descriptor: Recombinase CRE, loxP
Authors:Ghosh, K, Lau, C.K, Guo, F, Segall, A.M, Van Duyne, G.D.
Deposit date:2004-10-05
Release date:2004-12-14
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Peptide trapping of the Holliday junction intermediate in Cre-loxP site-specific recombination.
J.Biol.Chem., 280, 2005
1F44
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BU of 1f44 by Molmil
CRYSTAL STRUCTURE OF TRIMERIC CRE RECOMBINASE-LOX COMPLEX
Descriptor: CRE RECOMBINASE, DNA (5'- D(*TP*AP*TP*AP*AP*CP*TP*TP*CP*GP*TP*AP*TP*AP*GP*C)-3'), DNA (5'-D(*AP*TP*AP*TP*GP*CP*TP*AP*TP*AP*CP*GP*AP*AP*GP*TP*TP*AP*T)-3')
Authors:Baldwin, E.P, Woods, K.C.
Deposit date:2000-06-07
Release date:2001-10-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Quasi-equivalence in site-specific recombinase structure and function: crystal structure and activity of trimeric Cre recombinase bound to a three-way Lox DNA junction.
J.Mol.Biol., 313, 2001
1KBU
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BU of 1kbu by Molmil
CRE RECOMBINASE BOUND TO A LOXP HOLLIDAY JUNCTION
Descriptor: CRE RECOMBINASE, LOXP
Authors:Martin, S.S, Pulido, E, Chu, V.C, Lechner, T, Baldwin, E.P.
Deposit date:2001-11-06
Release date:2002-06-07
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Order of Strand Exchanges in Cre-LoxP Recombination and its Basis Suggested by the Crystal Structure of a Cre-LoxP Holliday Junction Complex
J.Mol.Biol., 319, 2002
3C29
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BU of 3c29 by Molmil
Cre-loxP Synaptic structure
Descriptor: LoxP DNA, chain C,, chain D,F, ...
Authors:Ghosh, K, Van Duyne, G.D.
Deposit date:2008-01-24
Release date:2009-02-17
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Synapsis study in detail
To be Published
4CRX
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BU of 4crx by Molmil
ASYMMETRIC DNA-BENDING IN THE CRE-LOXP SITE-SPECIFIC RECOMBINATION SYNAPSE
Descriptor: DNA (35 NUCLEOTIDE CRE RECOGNITION SITE), PROTEIN (CRE RECOMBINASE)
Authors:Guo, F, Gopaul, D.N, Van Duyne, G.D.
Deposit date:1999-04-20
Release date:1999-06-14
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Asymmetric DNA bending in the Cre-loxP site-specific recombination synapse.
Proc.Natl.Acad.Sci.USA, 96, 1999
3MGV
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BU of 3mgv by Molmil
Cre recombinase-DNA transition state
Descriptor: DNA (5'-D(*CP*AP*TP*AP*TP*GP*CP*TP*AP*TP*AP*CP*GP*AP*AP*GP*TP*TP*AP*T)-3'), DNA (5'-D(*TP*AP*TP*AP*AP*CP*TP*TP*CP*GP*TP*AP*TP*AP*G)-3'), Recombinase cre, ...
Authors:Gibb, B.P, Gupta, K, Ghosh, K, Sharp, R, Chen, J, Van Duyne, G.D.
Deposit date:2010-04-07
Release date:2010-05-26
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Requirements for catalysis in the Cre recombinase active site.
Nucleic Acids Res., 38, 2010
1MA7
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BU of 1ma7 by Molmil
Crystal structure of Cre site-specific recombinase complexed with a mutant DNA substrate, LoxP-A8/T27
Descriptor: CRE RECOMBINASE, LOXP
Authors:Martin, S.S, Chu, V.C, Baldwin, E.P.
Deposit date:2002-08-01
Release date:2003-07-08
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Modulation of the active complex assembly and turnover rate by protein-DNA interactions in Cre-LoxP recombination
Biochemistry, 42, 2003
1PVP
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BU of 1pvp by Molmil
BASIS FOR A SWITCH IN SUBSTRATE SPECIFICITY: CRYSTAL STRUCTURE OF SELECTED VARIANT OF CRE SITE-SPECIFIC RECOMBINASE, ALSHG BOUND TO THE ENGINEERED RECOGNITION SITE LOXM7
Descriptor: 34-MER, Recombinase cre
Authors:Baldwin, E.P, Martin, S.S, Abel, J, Gelato, K.A, Kim, H, Schultz, P.G, Santoro, S.W.
Deposit date:2003-06-28
Release date:2004-02-17
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:A specificity switch in selected cre recombinase variants is mediated by macromolecular plasticity and water.
Chem.Biol., 10, 2003
1CRX
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BU of 1crx by Molmil
CRE RECOMBINASE/DNA COMPLEX REACTION INTERMEDIATE I
Descriptor: CRE RECOMBINASE, DNA (5'-D(*AP*TP*AP*TP*GP*CP*TP*AP*TP*AP*CP*GP*AP*AP*GP*TP*TP*AP*T)-3'), DNA (5'-D(*TP*AP*TP*AP*AP*CP*TP*TP*CP*GP*TP*AP*TP*AP*G)-3'), ...
Authors:Guo, F, Gopaul, D.N, Van Duyne, G.D.
Deposit date:1997-07-02
Release date:1998-10-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of Cre recombinase complexed with DNA in a site-specific recombination synapse.
Nature, 389, 1997
2HOF
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BU of 2hof by Molmil
Crystal structure of the pre-cleavage synaptic complex in the cre-loxp site-specific recombination
Descriptor: LoxP DNA, Recombinase cre
Authors:Ghosh, K, Van Duyne, G.D.
Deposit date:2006-07-14
Release date:2007-06-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Synapsis of loxP sites by Cre recombinase.
J.Biol.Chem., 282, 2007
3CRX
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BU of 3crx by Molmil
CRE RECOMBINASE/DNA COMPLEX INTERMEDIATE I
Descriptor: CRE RECOMBINASE, DNA 35-MER
Authors:Gopaul, D.N, Guo, F, Vanduyne, G.D.
Deposit date:1998-06-19
Release date:1999-12-14
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of the Holliday junction intermediate in Cre-loxP site-specific recombination.
EMBO J., 17, 1998
2CRX
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BU of 2crx by Molmil
STRUCTURE OF THE HOLLIDAY JUNCTION INTERMEDIATE IN CRE-LOXP SITE-SPECIFIC RECOMBINATION
Descriptor: DNA 35-MER, PROTEIN (CRE RECOMBINASE)
Authors:Gopaul, D.N, Guo, F, Vanduyne, G.D.
Deposit date:1998-06-19
Release date:1999-12-14
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of the Holliday junction intermediate in Cre-loxP site-specific recombination.
EMBO J., 17, 1998
1DRG
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BU of 1drg by Molmil
CRYSTAL STRUCTURE OF TRIMERIC CRE RECOMBINASE-LOX COMPLEX
Descriptor: 5'-D(*AP*TP*AP*TP*GP*CP*TP*AP*TP*AP*CP*GP*AP*AP*GP*TP*TP*AP*T)-3', 5'-D(*TP*AP*TP*AP*AP*CP*TP*TP*CP*GP*TP*AP*TP*AP*GP*C)-3', CRE RECOMBINASE
Authors:Woods, K.C, Baldwin, E.P.
Deposit date:2000-01-06
Release date:2001-10-19
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Quasi-equivalence in site-specific recombinase structure and function: crystal structure and activity of trimeric Cre recombinase bound to a three-way Lox DNA junction
J.Mol.Biol., 313, 2001
3C28
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BU of 3c28 by Molmil
Crystal structure of the product synapse complex
Descriptor: LoxP DNA, chain C, chain D, ...
Authors:Ghosh, K, Van Duyne, G.D.
Deposit date:2008-01-24
Release date:2009-02-17
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Detailed study on Synapsis in Cre-loxP recombination reaction
To be Published
2HOI
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BU of 2hoi by Molmil
Crystal structure of the tetrameric pre-cleavage synaptic complex in the cre-loxp site-specific recombination
Descriptor: LoxP DNA, Recombinase Cre
Authors:Ghosh, K, Van Duyne, G.D.
Deposit date:2006-07-14
Release date:2007-06-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.601 Å)
Cite:Synapsis of loxP sites by Cre recombinase.
J.Biol.Chem., 282, 2007
1PVR
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BU of 1pvr by Molmil
BASIS FOR A SWITCH IN SUBSTRATE SPECIFICITY: CRYSTAL STRUCTURE OF SELECTED VARIANT OF CRE SITE-SPECIFIC RECOMBINASE, LNSGG BOUND TO THE LOXP (WILDTYPE) RECOGNITION SITE
Descriptor: 34-MER, Recombinase CRE
Authors:Baldwin, E.P, Martin, S.S, Abel, J, Gelato, K.A, Kim, H, Schultz, P.G, Santoro, S.W.
Deposit date:2003-06-28
Release date:2004-02-17
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:A specificity switch in selected cre recombinase variants is mediated by macromolecular plasticity and water.
Chem.Biol., 10, 2003
5CRX
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BU of 5crx by Molmil
ASYMMETRIC DNA-BENDING IN THE CRE-LOXP SITE-SPECIFIC RECOMBINATION SYNAPSE
Descriptor: DNA (35-MER), PROTEIN (BACTERIOPHAGE P1 CRE GENE)
Authors:Guo, F, Gopaul, D.N, Van Duyne, G.D.
Deposit date:1999-04-21
Release date:1999-07-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Asymmetric DNA bending in the Cre-loxP site-specific recombination synapse.
Proc.Natl.Acad.Sci.USA, 96, 1999
1PVQ
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BU of 1pvq by Molmil
BASIS FOR A SWITCH IN SUBSTRATE SPECIFICITY: CRYSTAL STRUCTURE OF SELECTED VARIANT OF CRE SITE-SPECIFIC RECOMBINASE, LNSGG BOUND TO THE ENGINEERED RECOGNITION SITE LOXM7
Descriptor: DNA 34-MER, Recombinase cre
Authors:Baldwin, E.P, Martin, S.S, Abel, J, Gelato, K.A, Kim, H, Schultz, P.G, Santoro, S.W.
Deposit date:2003-06-28
Release date:2004-02-17
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:A specificity switch in selected cre recombinase variants is mediated by macromolecular plasticity and water.
Chem.Biol., 10, 2003
1XNS
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BU of 1xns by Molmil
Peptide trapped Holliday junction intermediate in Cre-loxP recombination
Descriptor: Recombinase CRE, loxP DNA
Authors:Ghosh, K, Lau, C.K, Guo, F, Segall, A.M, Van Duyne, G.D.
Deposit date:2004-10-05
Release date:2004-12-14
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Peptide trapping of the Holliday junction intermediate in Cre-loxP site-specific recombination.
J.Biol.Chem., 280, 2005
1Q3U
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BU of 1q3u by Molmil
Crystal structure of a wild-type Cre recombinase-loxP synapse: pre-cleavage complex
Descriptor: Cre recombinase, IODIDE ION, MAGNESIUM ION, ...
Authors:Ennifar, E, Meyer, J.E.W, Buchholz, F, Stewart, A.F, Suck, D.
Deposit date:2003-08-01
Release date:2003-09-16
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of a wild-type Cre recombinase-loxP synapse reveals a novel spacer conformation suggesting an alternative mechanism for DNA cleavage activation
Nucleic Acids Res., 31, 2003
1Q3V
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BU of 1q3v by Molmil
Crystal structure of a wild-type Cre recombinase-loxP synapse: phosphotyrosine covalent intermediate
Descriptor: Cre recombinase, IODIDE ION, MAGNESIUM ION, ...
Authors:Ennifar, E, Meyer, J.E.W, Buchholz, F, Stewart, A.F, Suck, D.
Deposit date:2003-08-01
Release date:2003-09-16
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.91 Å)
Cite:Crystal structure of a wild-type Cre recombinase-loxP synapse reveals a novel spacer conformation suggesting an alternative mechanism for DNA cleavage activation
Nucleic Acids Res., 31, 2003
1NZB
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BU of 1nzb by Molmil
Crystal structure of wild type Cre recombinase-loxP synapse
Descriptor: Cre recombinase, IODIDE ION, MAGNESIUM ION, ...
Authors:Ennifar, E, Meyer, J.E.W, Buchholz, F, Stewart, A.F, Suck, D.
Deposit date:2003-02-17
Release date:2003-09-16
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal structure of a wild-type Cre recombinase-loxP synapse reveals a novel spacer conformation suggesting an alternative mechanism for DNA cleavage activation
Nucleic Acids Res., 31, 2003
1OUQ
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BU of 1ouq by Molmil
Crystal structure of wild-type Cre recombinase-loxP synapse
Descriptor: Cre recombinase, IODIDE ION, MAGNESIUM ION, ...
Authors:Ennifar, E, Meyer, J.E.W, Buchholz, F, Stewart, A.F, Suck, D.
Deposit date:2003-03-25
Release date:2003-09-16
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of a wild-type Cre recombinase-loxP synapse reveals a novel spacer conformation suggesting an alternative mechanism for DNA cleavage activation
Nucleic Acids Res., 31, 2003
7RHX
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BU of 7rhx by Molmil
Cryo-EM structure of precleavage Cre tetrameric complex
Descriptor: DNA (42-MER), Recombinase cre
Authors:Stachowski, K, Foster, M.P.
Deposit date:2021-07-19
Release date:2022-01-19
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.23 Å)
Cite:Mechanisms of Cre recombinase synaptic complex assembly and activation illuminated by Cryo-EM.
Nucleic Acids Res., 50, 2022
7RHY
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BU of 7rhy by Molmil
Cre recombinase mutant (D33A/A36V/R192A) in complex with loxA DNA hairpin
Descriptor: DNA (49-MER), Recombinase cre
Authors:Stachowski, K, Foster, M.P.
Deposit date:2021-07-19
Release date:2022-01-19
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.91 Å)
Cite:Mechanisms of Cre recombinase synaptic complex assembly and activation illuminated by Cryo-EM.
Nucleic Acids Res., 50, 2022

 

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