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PDB: 575 results

2ILN
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BU of 2iln by Molmil
Crystal structure of the Bowman-Birk inhibitor from snail medic seeds in complex with bovine trypsin
Descriptor: Bowman-Birk type proteinase inhibitor, Cationic trypsin
Authors:Capaldi, S, Perduca, M, Faggion, B, Carrizo, M.E, Tava, A, Ragona, L, Monaco, H.L.
Deposit date:2006-10-03
Release date:2007-04-10
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the anticarcinogenic Bowman-Birk inhibitor from snail medic (Medicago scutellata) seeds complexed with bovine trypsin
J.Struct.Biol., 158, 2007
1PPE
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BU of 1ppe by Molmil
THE REFINED 2.0 ANGSTROMS X-RAY CRYSTAL STRUCTURE OF THE COMPLEX FORMED BETWEEN BOVINE BETA-TRYPSIN AND CMTI-I, A TRYPSIN INHIBITOR FROM SQUASH SEEDS (CUCURBITA MAXIMA): TOPOLOGICAL SIMILARITY OF THE SQUASH SEED INHIBITORS WITH THE CARBOXYPEPTIDASE A INHIBITOR FROM POTATOES
Descriptor: TRYPSIN, TRYPSIN INHIBITOR CMTI-I
Authors:Bode, W, Huber, R.
Deposit date:1991-10-24
Release date:1994-01-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:The refined 2.0 A X-ray crystal structure of the complex formed between bovine beta-trypsin and CMTI-I, a trypsin inhibitor from squash seeds (Cucurbita maxima). Topological similarity of the squash seed inhibitors with the carboxypeptidase A inhibitor from potatoes
FEBS Lett., 242, 1989
1K1N
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BU of 1k1n by Molmil
BOVINE TRYPSIN-INHIBITOR COMPLEX
Descriptor: CALCIUM ION, TRYPSIN, [N-[N-(4-METHOXY-2,3,6-TRIMETHYLPHENYLSULFONYL)-L-ASPARTYL]-D-(4-AMIDINO-PHENYLALANYL)]-PIPERIDINE
Authors:Stubbs, M.T.
Deposit date:2001-09-25
Release date:2001-11-28
Last modified:2012-12-12
Method:X-RAY DIFFRACTION (2 Å)
Cite:Factorising ligand affinity: a combined thermodynamic and crystallographic study of trypsin and thrombin inhibition.
J.Mol.Biol., 313, 2001
1TYN
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BU of 1tyn by Molmil
ATOMIC STRUCTURE OF THE TRYPSIN-CYCLOTHEONAMIDE A COMPLEX: LESSONS FOR THE DESIGN OF SERINE PROTEASE INHIBITORS
Descriptor: BETA-TRYPSIN, CYCLOTHEONAMIDE A
Authors:Lee, A.Y, Hagihara, M, Karmacharya, R, Albers, M.W, Schreiber, S.L, Clardy, J.
Deposit date:1994-09-19
Release date:1995-01-26
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2 Å)
Cite:Atomic Structure of the Trypsin-Cyclotheonamide a Complex: Lessons for the Design of Serine Protease Inhibitors
J.Am.Chem.Soc., 115, 1993
1K1O
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BU of 1k1o by Molmil
BOVINE TRYPSIN-INHIBITOR COMPLEX
Descriptor: CALCIUM ION, TRYPSIN, {[(1R)-2-((2S)-2-{[(3-{[AMINO(IMINO)METHYL]AMINO}PROPYL)AMINO]CARBONYL}PIPERIDINYL)-1-(CYCLOHEXYLMETHYL)-2-OXOETHYL]AMINO}ACETIC ACID
Authors:Stubbs, M.T.
Deposit date:2001-09-25
Release date:2001-11-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Factorising ligand affinity: a combined thermodynamic and crystallographic study of trypsin and thrombin inhibition.
J.Mol.Biol., 313, 2001
1OX1
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BU of 1ox1 by Molmil
crystal structure of the bovine trypsin complex with a synthetic 11 peptide inhibitor
Descriptor: 11-mer peptide, CALCIUM ION, Trypsinogen, ...
Authors:Wu, G, Huang, Y, Zhu, G, Huang, Q, Tang, Y, Miyake, H, Kusunoki, M.
Deposit date:2003-03-31
Release date:2004-05-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:crystal structure of the bovine trypsin complex with a synthetic 11 peptide inhibitor
To be published
1GBT
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BU of 1gbt by Molmil
STRUCTURE OF AN ACYL-ENZYME INTERMEDIATE DURING CATALYSIS: (GUANIDINOBENZOYL) TRYPSIN
Descriptor: 4-carbamimidamidobenzoic acid, BETA-TRYPSIN, CALCIUM ION, ...
Authors:Singer, P.T, Sweet, R.M.
Deposit date:1991-09-17
Release date:1994-01-31
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of an acyl-enzyme intermediate during catalysis: (guanidinobenzoyl)trypsin.
Biochemistry, 29, 1990
1V2K
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BU of 1v2k by Molmil
Factor XA specific Inhibitor in complex with bovine trypsin variant X(triple.Glu)bT.D2
Descriptor: CALCIUM ION, SULFATE ION, Trypsin, ...
Authors:Rauh, D, Klebe, G, Stubbs, M.T.
Deposit date:2003-10-17
Release date:2004-06-01
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Understanding protein-ligand interactions: the price of protein flexibility
J.Mol.Biol., 335, 2004
1O3A
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BU of 1o3a by Molmil
Elaborate Manifold of Short Hydrogen Bond Arrays Mediating Binding of Active Site-Directed Serine Protease Inhibitors
Descriptor: 3-{5-[AMINO(IMINIO)METHYL]-1H-BENZIMIDAZOL-2-YL}-1,1'-BIPHENYL-2-OLATE, BETA-TRYPSIN, CALCIUM ION
Authors:Katz, B.A, Elrod, K, Verner, E, Mackman, R.L, Luong, C, Shrader, W.D, Sendzik, M, Spencer, J.R, Sprengeler, P.A, Kolesnikov, A, Tai, V.W, Hui, H.C, Breitenbucher, J.G, Allen, D, Janc, J.W.
Deposit date:2003-03-06
Release date:2003-09-02
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Elaborate manifold of short hydrogen bond arrays mediating binding of active site-directed serine protease inhibitors.
J.Mol.Biol., 329, 2003
1EB2
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BU of 1eb2 by Molmil
Trypsin inhibitor complex (BPO)
Descriptor: 3-[(Z)-AMINO(IMINO)METHYL]-N-[2-(4-BENZOYL-1-PIPERIDINYL)-2-OXO-1-PHENYLETHYL]BENZAMIDE, CALCIUM ION, SULFATE ION, ...
Authors:Wilkinson, K.W, Young, S.C, Liebeschuetz, J.W, Brady, R.L.
Deposit date:2001-07-18
Release date:2002-02-11
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Pro_Select: Combining Structure-Based Drug Design and Array-Based Chemistry for Rapid Lead Discovery. 2. The Development of a Series of Highly Potent and Selective Factor Xa Inhibitors
J.Med.Chem., 45, 2002
2D8W
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BU of 2d8w by Molmil
Structure of HYPER-VIL-trypsin
Descriptor: CALCIUM ION, Cationic trypsin, IODIDE ION
Authors:Miyatake, H, Hasegawa, T, Yamano, A.
Deposit date:2005-12-08
Release date:2006-07-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:New methods to prepare iodinated derivatives by vaporizing iodine labelling (VIL) and hydrogen peroxide VIL (HYPER-VIL)
ACTA CRYSTALLOGR.,SECT.D, 62, 2006
6B6T
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BU of 6b6t by Molmil
Orthorhombic trypsin cryocooled to 100 K with 50% methanol as cryoprotectant
Descriptor: BENZAMIDINE, CALCIUM ION, Cationic trypsin, ...
Authors:Juers, D.H.
Deposit date:2017-10-03
Release date:2018-03-14
Last modified:2020-01-01
Method:X-RAY DIFFRACTION (2.00000477 Å)
Cite:The impact of cryosolution thermal contraction on proteins and protein crystals: volumes, conformation and order.
Acta Crystallogr D Struct Biol, 74, 2018
6B6R
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BU of 6b6r by Molmil
Orthorhombic trypsin cryocooled to 100 K with 50% mpd as cryoprotectant
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, BENZAMIDINE, CALCIUM ION, ...
Authors:Juers, D.H.
Deposit date:2017-10-03
Release date:2017-11-01
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.00005865 Å)
Cite:The impact of cryosolution thermal contraction on proteins and protein crystals: volumes, conformation and order.
Acta Crystallogr D Struct Biol, 74, 2018
6B6P
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BU of 6b6p by Molmil
Orthorhombic trypsin cryocooled to 100 K with 30% xylose as cryoprotectant
Descriptor: BENZAMIDINE, CALCIUM ION, Cationic trypsin, ...
Authors:Juers, D.H.
Deposit date:2017-10-03
Release date:2017-11-01
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.000059 Å)
Cite:The impact of cryosolution thermal contraction on proteins and protein crystals: volumes, conformation and order.
Acta Crystallogr D Struct Biol, 74, 2018
6B6Q
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BU of 6b6q by Molmil
Orthorhombic trypsin cryocooled to 100 K with 50% xylose as cryoprotectant
Descriptor: BENZAMIDINE, CALCIUM ION, Cationic trypsin, ...
Authors:Juers, D.H.
Deposit date:2017-10-03
Release date:2017-11-01
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.000068 Å)
Cite:The impact of cryosolution thermal contraction on proteins and protein crystals: volumes, conformation and order.
Acta Crystallogr D Struct Biol, 74, 2018
6B6S
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BU of 6b6s by Molmil
Orthorhombic trypsin cryocooled to 100 K with 50% ethanol as cryoprotectant
Descriptor: BENZAMIDINE, CALCIUM ION, Cationic trypsin, ...
Authors:Juers, D.H.
Deposit date:2017-10-03
Release date:2017-11-01
Last modified:2020-01-01
Method:X-RAY DIFFRACTION (2.0002284 Å)
Cite:The impact of cryosolution thermal contraction on proteins and protein crystals: volumes, conformation and order.
Acta Crystallogr D Struct Biol, 74, 2018
7JR1
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BU of 7jr1 by Molmil
Crystal structure of the R64F mutant of Bauhinia Bauhinioides Kallikrein Inhibitor complexed with Bovine Trypsin
Descriptor: Cationic trypsin, Kunitz-type inihibitor, SODIUM ION, ...
Authors:Li, M, Wlodawer, A, Gustchina, A.
Deposit date:2020-08-11
Release date:2021-07-21
Last modified:2021-08-11
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural studies of complexes of kallikrein 4 with wild-type and mutated forms of the Kunitz-type inhibitor BbKI.
Acta Crystallogr D Struct Biol, 77, 2021
3BTW
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BU of 3btw by Molmil
THE CRYSTAL STRUCTURES OF THE COMPLEXES BETWEEN BOVINE BETA-TRYPSIN AND TEN P1 VARIANTS OF BPTI
Descriptor: CALCIUM ION, PROTEIN (BOVINE PANCREATIC TRYPSIN INHIBITOR), PROTEIN (TRYPSIN), ...
Authors:Helland, R, Otlewski, J, Sundheim, O, Dadlez, M, Smalas, A.O.
Deposit date:1999-03-11
Release date:2000-03-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:The crystal structures of the complexes between bovine beta-trypsin and ten P1 variants of BPTI.
J.Mol.Biol., 287, 1999
3QK1
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BU of 3qk1 by Molmil
Crystal Structure of Enterokinase-like Trypsin Variant
Descriptor: 1,2-ETHANEDIOL, BENZAMIDINE, CALCIUM ION, ...
Authors:Schoepfel, M, Tziridis, A, Arnold, U, Stubbs, M.T.
Deposit date:2011-01-31
Release date:2011-03-23
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Towards a restriction proteinase: construction of a self-activating enzyme.
Chembiochem, 12, 2011
8IYV
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BU of 8iyv by Molmil
Crystal structure of trypsin-famotidine complex at 2.10 Angstroms resolution
Descriptor: CALCIUM ION, CHLORIDE ION, Cationic trypsin, ...
Authors:Ahmad, M.S, Kalam, N, Akbar, Z, Rasheed, S, Choudhary, M.I.
Deposit date:2023-04-06
Release date:2024-09-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for the binding of famotidine, cimetidine, guanidine, and pimagedine with serine protease.
Biochem.Biophys.Res.Commun., 733, 2024
8IZI
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BU of 8izi by Molmil
Crystal structure of trypsin-cimetidine complex at 2.10 Angstroms resolution
Descriptor: 2-cyano-1-methyl-3-[2-[(5-methyl-1~{H}-imidazol-4-yl)methylsulfanyl]ethyl]guanidine, CALCIUM ION, CHLORIDE ION, ...
Authors:Ahmad, M.S, Kalam, N, Akbar, Z, Rasheed, S, Choudhary, M.I.
Deposit date:2023-04-07
Release date:2024-09-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for the binding of famotidine, cimetidine, guanidine, and pimagedine with serine protease.
Biochem.Biophys.Res.Commun., 733, 2024
1AUJ
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BU of 1auj by Molmil
BOVINE TRYPSIN COMPLEXED TO META-CYANO-BENZYLIC INHIBITOR
Descriptor: 1-{[1-(2-AMINO-3-PHENYL-PROPIONYL)-PYRROLIDINE-2-CARBONYL]-AMINO}-2-(3-CYANO-PHENYL)-ETHANEBORONIC ACID, CALCIUM ION, TRYPSIN
Authors:Alexander, R, Smallwood, A, Kettner, C.
Deposit date:1997-08-28
Release date:1998-10-14
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:New inhibitors of thrombin and other trypsin-like proteases: hydrogen bonding of an aromatic cyano group with a backbone amide of the P1 binding site replaces binding of a basic side chain.
Biochemistry, 36, 1997
7AYS
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BU of 7ays by Molmil
Structure of bovine trypsin determined from single femtosecond snapshots per orientation at room temperature
Descriptor: BENZAMIDINE, CALCIUM ION, Cationic trypsin, ...
Authors:Jensen, M.
Deposit date:2020-11-13
Release date:2021-01-20
Last modified:2021-08-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:High-resolution macromolecular crystallography at the FemtoMAX beamline with time-over-threshold photon detection.
J.Synchrotron Radiat., 28, 2021
2TGD
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BU of 2tgd by Molmil
LACK OF THE TRANSITION STATE STABILIZATION SITE IS A FACTOR IN THE INACTIVITY OF TRYPSINOGEN, A SERINE PROTEASE ZYMOGEN. STRUCTURE OF DFP INHIBITED BOVINE TRYPSINOGEN AT 2.1 ANGSTROMS RESOLUTION
Descriptor: CALCIUM ION, DIISOPROPYL PHOSPHONATE, TRYPSINOGEN
Authors:Jones, M.O, Stroud, R.M.
Deposit date:1986-03-17
Release date:1986-05-07
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Lack of the Transition State Stabilization Site is a Factor in the Inactivity of Trypsinogen, a Serine Protease Zymogen. Structure of Dfp Inhibited Bovine Trypsinogen at 2.1 Angstroms Resolution
To be Published
2TPI
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BU of 2tpi by Molmil
ON THE DISORDERED ACTIVATION DOMAIN IN TRYPSINOGEN. CHEMICAL LABELLING AND LOW-TEMPERATURE CRYSTALLOGRAPHY
Descriptor: ISOLEUCINE, MERCURY (II) ION, TRYPSIN INHIBITOR, ...
Authors:Walter, J, Steigemann, W, Singh, T.P, Bartunik, H, Bode, W, Huber, R.
Deposit date:1981-10-26
Release date:1982-03-04
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:On the Disordered Activation Domain in Trypsinogen. Chemical Labelling and Low-Temperature Crystallography
Acta Crystallogr.,Sect.B, 38, 1982

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