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6JKY
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BU of 6jky by Molmil
Crystal structure of MvcA-UBE2N-Ub complex from Legionella pneumophila
Descriptor: MvcA, Ub, Ubiquitin-conjugating enzyme E2 N
Authors:Ouyang, S.Y, Guan, H.
Deposit date:2019-03-03
Release date:2019-12-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.454 Å)
Cite:Legionella pneumophila regulates the activity of UBE2N by deamidase-mediated deubiquitination.
Embo J., 39, 2020
6HPR
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BU of 6hpr by Molmil
Crystal structure of cIAP1 RING domain bound to UbcH5B-Ub and a non-covalent Ub
Descriptor: Baculoviral IAP repeat-containing protein 2, Polyubiquitin-B, Ubiquitin-conjugating enzyme E2 D2, ...
Authors:Patel, A, Huang, D.T.
Deposit date:2018-09-21
Release date:2018-12-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural insights into non-covalent ubiquitin activation of the cIAP1-UbcH5B∼ubiquitin complex.
J. Biol. Chem., 294, 2019
2KJH
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BU of 2kjh by Molmil
NMR based structural model of the UBCH8-UBIQUITIN complex
Descriptor: Ubiquitin, Ubiquitin/ISG15-conjugating enzyme E2 L6
Authors:Serniwka, S.A, Shaw, G.S.
Deposit date:2009-05-28
Release date:2009-12-08
Last modified:2021-10-13
Method:SOLUTION NMR
Cite:The structure of the UbcH8-ubiquitin complex shows a unique ubiquitin interaction site.
Biochemistry, 48, 2009
6JB6
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BU of 6jb6 by Molmil
Crystal structure of Ub-conjugated Ube2K C92K&K97A mutant (isopeptide linkage), 2.7 A resolution
Descriptor: Ubiquitin, Ubiquitin-conjugating enzyme E2 K
Authors:Lee, J.-G, Youn, H.-S, Lee, Y, An, J.Y, Park, K.R, Kang, J.Y, Mun, S.A, Park, J, Park, T, Jin, M.W, Yang, J, Eom, S.H.
Deposit date:2019-01-25
Release date:2019-03-20
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of Ub-conjugated Ube2K C92K&K97A mutant (isopeptide linkage), 2.7 A resolution
To Be Published
6JB7
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BU of 6jb7 by Molmil
Crystal structure of Ub-conjugated Ube2K C92K&K97A mutant (isopeptide linkage), 2.1 A resolution
Descriptor: Ubiquitin, Ubiquitin-conjugating enzyme E2 K
Authors:Lee, J.-G, Youn, H.-S, Lee, Y, An, J.Y, Park, K.R, Kang, J.Y, Mun, S.A, Park, J, Park, T, Jin, M.W, Yang, J, Eom, S.H.
Deposit date:2019-01-25
Release date:2019-03-20
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of Ub-conjugated Ube2K C92K&K97A mutant (isopeptide linkage), 2.1 A resolution
To Be Published
2GRR
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BU of 2grr by Molmil
Crystal Structure of human RanGAP1-Ubc9-D127S
Descriptor: Ran GTPase-activating protein 1, Ubiquitin-conjugating enzyme E2 I
Authors:Yunus, A.A, Lima, C.D.
Deposit date:2006-04-24
Release date:2006-05-30
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Lysine activation and functional analysis of E2-mediated conjugation in the SUMO pathway.
Nat.Struct.Mol.Biol., 13, 2006
2GRQ
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BU of 2grq by Molmil
Crystal Structure of human RanGAP1-Ubc9-D127A
Descriptor: Ran GTPase-activating protein 1, Ubiquitin-conjugating enzyme E2 I
Authors:Yunus, A.A, Lima, C.D.
Deposit date:2006-04-24
Release date:2006-05-30
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Lysine activation and functional analysis of E2-mediated conjugation in the SUMO pathway.
Nat.Struct.Mol.Biol., 13, 2006
6KL4
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BU of 6kl4 by Molmil
Crystal structure of MavC-UBE2N-Ub
Descriptor: MavC, Ub, Ubiquitin-conjugating enzyme E2 N
Authors:Ouyang, S, Guan, H.
Deposit date:2019-07-29
Release date:2020-04-15
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Molecular Basis of Ubiquitination Catalyzed by the Bacterial Transglutaminase MavC.
Adv Sci, 7, 2020
6KG6
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BU of 6kg6 by Molmil
Crystal structure of MavC/UBE2N-Ub complex
Descriptor: MavC, Ubiquitin-40S ribosomal protein S27a, Ubiquitin-conjugating enzyme E2 N
Authors:Wang, Y, Huang, Y, Chang, M, Feng, Y.
Deposit date:2019-07-10
Release date:2020-04-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Structural insights into the mechanism and inhibition of transglutaminase-induced ubiquitination by the Legionella effector MavC.
Nat Commun, 11, 2020
6KFP
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BU of 6kfp by Molmil
Crystal structure of MavC ternary complex
Descriptor: MavC, Ubiquitin-40S ribosomal protein S27a, Ubiquitin-conjugating enzyme E2 N
Authors:Mu, Y, Wang, Y, Han, Y, Li, D, Feng, Y.
Deposit date:2019-07-08
Release date:2020-04-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.92 Å)
Cite:Structural insights into the mechanism and inhibition of transglutaminase-induced ubiquitination by the Legionella effector MavC.
Nat Commun, 11, 2020
2GRP
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BU of 2grp by Molmil
Crystal Structure of human RanGAP1-Ubc9-Y87A
Descriptor: Ran GTPase-activating protein 1, Ubiquitin-conjugating enzyme E2 I
Authors:Yunus, A.A, Lima, C.D.
Deposit date:2006-04-24
Release date:2006-05-30
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Lysine activation and functional analysis of E2-mediated conjugation in the SUMO pathway.
Nat.Struct.Mol.Biol., 13, 2006
2Y9M
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BU of 2y9m by Molmil
Pex4p-Pex22p structure
Descriptor: 1,2-ETHANEDIOL, PEROXISOME ASSEMBLY PROTEIN 22, UBIQUITIN-CONJUGATING ENZYME E2-21 KDA
Authors:Williams, C, van den Berg, M, Panjikar, S, Distel, B, Wilmanns, M.
Deposit date:2011-02-15
Release date:2011-10-26
Last modified:2017-12-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Insights Into Ubiquitin-Conjugating Enzyme/ Co-Activator Interactions from the Structure of the Pex4P:Pex22P Complex.
Embo J., 31, 2011
3W31
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BU of 3w31 by Molmil
Structual basis for the recognition of Ubc13 by the Shigella flexneri effector OspI
Descriptor: IODIDE ION, ORF169b, Ubiquitin-conjugating enzyme E2 N
Authors:Nishide, A, Kim, M, Takagi, K, Sasakawa, C, Mizushima, T.
Deposit date:2012-12-07
Release date:2013-03-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.96 Å)
Cite:Structural basis for the recognition of Ubc13 by the Shigella flexneri effector OspI.
J.Mol.Biol., 425, 2013
2Y9P
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BU of 2y9p by Molmil
Pex4p-Pex22p mutant II structure
Descriptor: PEROXISOME ASSEMBLY PROTEIN 22, UBIQUITIN-CONJUGATING ENZYME E2-21 KDA
Authors:Williams, C, van den Berg, M, Panjikar, S, Distel, B, Wilmanns, M.
Deposit date:2011-02-16
Release date:2012-02-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Pex4P-Pex22P Structure
To be Published
3FN1
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BU of 3fn1 by Molmil
E2-RING expansion of the NEDD8 cascade confers specificity to cullin modification.
Descriptor: NEDD8-activating enzyme E1 catalytic subunit, NEDD8-conjugating enzyme UBE2F
Authors:Huang, D.T, Ayrault, O, Hunt, H.W, Taherbhoy, A.M, Duda, D.M, Scott, D.C, Borg, L.A, Neale, G, Murray, P.J, Roussel, M.F, Schulman, B.A.
Deposit date:2008-12-22
Release date:2009-03-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:E2-RING expansion of the NEDD8 cascade confers specificity to cullin modification
Mol.Cell, 33, 2009
3A4S
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BU of 3a4s by Molmil
The crystal structure of the SLD2:Ubc9 complex
Descriptor: NFATC2-interacting protein, SUMO-conjugating enzyme UBC9
Authors:Sekiyama, N, Arita, K, Ikeda, Y, Ariyoshi, M, Tochio, H, Saitoh, H, Shirakawa, M.
Deposit date:2009-07-14
Release date:2010-02-02
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis for regulation of poly-SUMO chain by a SUMO-like domain of Nip45
Proteins, 78, 2009
3A33
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BU of 3a33 by Molmil
UbcH5b~Ubiquitin Conjugate
Descriptor: GLYCEROL, Ubiquitin, Ubiquitin-conjugating enzyme E2 D2
Authors:Sakata, E, Satoh, T, Yamamoto, S, Yamaguchi, Y, Yagi-Utsumi, M, Kurimoto, E, Wakatsuki, S, Kato, K.
Deposit date:2009-06-08
Release date:2009-11-24
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of UbcH5b~Ubiquitin Intermediate: Insight into the Formation of the Self-Assembled E2~Ub Conjugates
Structure, 18, 2010
2YHO
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BU of 2yho by Molmil
The IDOL-UBE2D complex mediates sterol-dependent degradation of the LDL receptor
Descriptor: ACETATE ION, E3 UBIQUITIN-PROTEIN LIGASE MYLIP, UBIQUITIN-CONJUGATING ENZYME E2 D1, ...
Authors:Fairall, L, Goult, B.T, Millard, C.J, Tontonoz, P, Schwabe, J.W.R.
Deposit date:2011-05-04
Release date:2011-06-29
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The Idol-Ube2D Complex Mediates Sterol-Dependent Degradation of the Ldl Receptor.
Genes Dev., 25, 2011
4DHJ
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BU of 4dhj by Molmil
The structure of a ceOTUB1 ubiquitin aldehyde UBC13~Ub complex
Descriptor: Ubiquitin, Ubiquitin aldehyde, Ubiquitin thioesterase otubain-like, ...
Authors:Wiener, R, Zhang, X, Wang, T, Wolberger, C.
Deposit date:2012-01-27
Release date:2012-02-22
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:The mechanism of OTUB1-mediated inhibition of ubiquitination.
Nature, 483, 2012
5ULH
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BU of 5ulh by Molmil
Structure of RNF165 in complex with a UbcH5b~Ub conjugate
Descriptor: E3 ubiquitin-protein ligase RNF165, GLYCEROL, THIOCYANATE ION, ...
Authors:Middleton, A.J, Day, C.L, Wright, J.D.
Deposit date:2017-01-24
Release date:2017-06-07
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Discovery of new non-covalent ubiquitin binding sites on UbcH5
To be published
8EAZ
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BU of 8eaz by Molmil
HOIL-1/E2-Ub/Ub transthiolation complex
Descriptor: RanBP-type and C3HC4-type zinc finger-containing protein 1, Ubiquitin, Ubiquitin-conjugating enzyme E2 L3, ...
Authors:Wang, X.S, Cotton, T.R, Lechtenberg, B.C.
Deposit date:2022-08-30
Release date:2023-01-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.08 Å)
Cite:The unifying catalytic mechanism of the RING-between-RING E3 ubiquitin ligase family.
Nat Commun, 14, 2023
8EB0
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BU of 8eb0 by Molmil
RNF216/E2-Ub/Ub transthiolation complex
Descriptor: E3 ubiquitin-protein ligase RNF216, SULFATE ION, Ubiquitin, ...
Authors:Cotton, T.R, Wang, X.S, Lechtenberg, B.C.
Deposit date:2022-08-30
Release date:2023-01-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.03 Å)
Cite:The unifying catalytic mechanism of the RING-between-RING E3 ubiquitin ligase family.
Nat Commun, 14, 2023
8E2D
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BU of 8e2d by Molmil
Cryo-EM structure of BIRC6 (consensus)
Descriptor: Baculoviral IAP repeat-containing protein 6
Authors:Hunkeler, M, Fischer, E.S.
Deposit date:2022-08-15
Release date:2023-02-15
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.07 Å)
Cite:Structures of BIRC6-client complexes provide a mechanism of SMAC-mediated release of caspases.
Science, 379, 2023
8E2G
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BU of 8e2g by Molmil
Cryo-EM structure of N-terminal arm (aa68-966) of BIRC6 (from local refinement 3)
Descriptor: Baculoviral IAP repeat-containing protein 6
Authors:Hunkeler, M, Fischer, E.S.
Deposit date:2022-08-15
Release date:2023-02-15
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (2.99 Å)
Cite:Structures of BIRC6-client complexes provide a mechanism of SMAC-mediated release of caspases.
Science, 379, 2023
8E2E
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BU of 8e2e by Molmil
Cryo-EM structure of helical arch of BIRC6 (from local refinement 1)
Descriptor: Baculoviral IAP repeat-containing protein 6
Authors:Hunkeler, M, Fischer, E.S.
Deposit date:2022-08-15
Release date:2023-02-15
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (1.98 Å)
Cite:Structures of BIRC6-client complexes provide a mechanism of SMAC-mediated release of caspases.
Science, 379, 2023

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數據於2024-07-17公開中

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