Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6KEA
DownloadVisualize
BU of 6kea by Molmil
crystal structure of MBP-tagged REV7-IpaB complex
Descriptor: Maltose-binding periplasmic protein,LINKER,hREV7,LINKER,Invasin IpaB,hREV3
Authors:Wang, X, Pernicone, N, Pertz, L, Hua, D.P, Zhang, T.Q, Listovsky, T, Xie, W.
Deposit date:2019-07-04
Release date:2019-09-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:REV7 has a dynamic adaptor region to accommodate small GTPase RAN/ShigellaIpaB ligands, and its activity is regulated by the RanGTP/GDP switch.
J.Biol.Chem., 294, 2019
6NZZ
DownloadVisualize
BU of 6nzz by Molmil
LRRC8A-DCPIB in MSP1E3D1 nanodisc expanded state
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 4-{[(2S)-2-butyl-6,7-dichloro-2-cyclopentyl-1-oxo-2,3-dihydro-1H-inden-5-yl]oxy}butanoic acid, Volume-regulated anion channel subunit LRRC8A
Authors:Kern, D.M, Hite, R.K, Brohawn, S.G.
Deposit date:2019-02-14
Release date:2019-02-27
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (3.32 Å)
Cite:Cryo-EM structures of the DCPIB-inhibited volume-regulated anion channel LRRC8A in lipid nanodiscs.
Elife, 8, 2019
6KKO
DownloadVisualize
BU of 6kko by Molmil
The crystal structure of SiaB-SiaC complex from Pseudomonas aeruginosa
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DUF1987 domain-containing protein, Putative serine phosphatase, ...
Authors:Gan, J.H, Yang, C.
Deposit date:2019-07-26
Release date:2020-06-10
Method:X-RAY DIFFRACTION (2.099 Å)
Cite:The SiaA/B/C/D signaling network regulates biofilm formation in Pseudomonas aeruginosa.
Embo J., 39, 2020
6KL6
DownloadVisualize
BU of 6kl6 by Molmil
Crystal structure of MERS-CoV N-NTD complexed with 5-Benzyloxygramine
Descriptor: N,N-dimethyl-1-(5-phenylmethoxy-1H-indol-3-yl)methanamine, Nucleoprotein
Authors:Hou, M.H, Lin, S.M, Wang, Y.S, Hsu, J.N.
Deposit date:2019-07-29
Release date:2020-03-25
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.77 Å)
Cite:Structure-Based Stabilization of Non-native Protein-Protein Interactions of Coronavirus Nucleocapsid Proteins in Antiviral Drug Design.
J.Med.Chem., 63, 2020
6K0R
DownloadVisualize
BU of 6k0r by Molmil
Ruvbl1-Ruvbl2 with truncated domain II in complex with phosphorylated Cordycepin
Descriptor: 3'-DEOXYADENOSINE-5'-TRIPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Zhang, W, Chen, L, Li, W, Ju, D, Huang, N, Zhang, E.
Deposit date:2019-05-07
Release date:2020-05-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.502 Å)
Cite:Chemical perturbations reveal that RUVBL2 regulates the circadian phase in mammals.
Sci Transl Med, 12, 2020
3R1P
DownloadVisualize
BU of 3r1p by Molmil
Odorant Binding Protein 7 from Anopheles gambiae with Four Disulfide Bridges, form P1
Descriptor: Odorant binding protein, antennal, PALMITIC ACID
Authors:Lagarde, A, Spinelli, S, Tegoni, M, Field, L, He, X, Zhou, J.J, Cambillau, C.
Deposit date:2011-03-11
Release date:2011-10-19
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The Crystal Structure of Odorant Binding Protein 7 from Anopheles gambiae Exhibits an Outstanding Adaptability of Its Binding Site.
J.Mol.Biol., 414, 2011
6KIW
DownloadVisualize
BU of 6kiw by Molmil
Cryo-EM structure of human MLL3-ubNCP complex (4.0 angstrom)
Descriptor: DNA (144-MER), DNA (145-MER), Histone H2A, ...
Authors:Huang, J, Xue, H, Yao, T.
Deposit date:2019-07-20
Release date:2019-09-11
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structural basis of nucleosome recognition and modification by MLL methyltransferases.
Nature, 573, 2019
6K95
DownloadVisualize
BU of 6k95 by Molmil
Crystal structural of human glutathione-specific gamma-glutamylcyclotransferase 2 (ChaC2)
Descriptor: Glutathione-specific gamma-glutamylcyclotransferase 2
Authors:Nguyen, T.K.Y, Han, B.W.
Deposit date:2019-06-14
Release date:2020-04-22
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Structural and Functional Analyses of Human ChaC2 in Glutathione Metabolism.
Biomolecules, 10, 2019
3SL8
DownloadVisualize
BU of 3sl8 by Molmil
Crystal structure of the catalytic domain of PDE4D2 with compound 10o
Descriptor: 1,2-ETHANEDIOL, 3-cyclopentyl 6-ethenyl 2-[(thiophen-2-ylacetyl)amino]-4,7-dihydrothieno[2,3-c]pyridine-3,6(5H)-dicarboxylate, DI(HYDROXYETHYL)ETHER, ...
Authors:Feil, S.F.
Deposit date:2011-06-24
Release date:2011-10-26
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Thiophene inhibitors of PDE4: Crystal structures show a second binding mode at the catalytic domain of PDE4D2.
Bioorg.Med.Chem.Lett., 21, 2011
3S6P
DownloadVisualize
BU of 3s6p by Molmil
Crystal Structure of Helicoverpa Armigera Stunt Virus
Descriptor: CALCIUM ION, CHLORIDE ION, Capsid protein
Authors:Speir, J.A, Chen, Z, Taylor, D.J, Johnson, J.E.
Deposit date:2011-05-25
Release date:2012-05-30
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of Helicoverpa armigera stunt virus
To be Published
3SA9
DownloadVisualize
BU of 3sa9 by Molmil
Crystal structure of Wild-type HIV-1 protease in complex With AF68
Descriptor: ACETATE ION, N~2~-acetyl-N-[(2S,3R)-3-hydroxy-4-{[(4-methoxyphenyl)sulfonyl](2-methylpropyl)amino}-1-phenylbutan-2-yl]-L-isoleucinamide, PHOSPHATE ION, ...
Authors:Schiffer, C.A, Nalam, M.N.L.
Deposit date:2011-06-02
Release date:2012-06-06
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Protease Inhibitors that protrude out from substrate envelope are more susceptible to developing drug resistance
To be Published
3SEC
DownloadVisualize
BU of 3sec by Molmil
Crystal structure of Methanothermobacter thermautotrophicus orotidine 5'-monophosphate decarboxylase complexed with pyrazofurin monophosphate
Descriptor: (1S)-1,4-anhydro-1-(5-carbamoyl-4-hydroxy-1H-pyrazol-3-yl)-5-O-phosphono-D-ribitol, GLYCEROL, Orotidine 5'-phosphate decarboxylase
Authors:Liu, Y, Kotra, L.P, Pai, E.F.
Deposit date:2011-06-10
Release date:2012-04-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of methanococcus thermolithotrophicus orotidine 5'-monophosphate decarboxylase complexed with pyrazofurin monophosphate
To be Published
3SI0
DownloadVisualize
BU of 3si0 by Molmil
Structure of glycosylated human glutaminyl cyclase
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, Glutaminyl-peptide cyclotransferase, ...
Authors:Parthier, C, Carrillo, D, Stubbs, M.T.
Deposit date:2011-06-17
Release date:2011-06-29
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structures of Glycosylated Mammalian Glutaminyl Cyclases Reveal Conformational Variability near the Active Center.
Biochemistry, 50, 2011
3TS9
DownloadVisualize
BU of 3ts9 by Molmil
Crystal Structure of the MDA5 Helicase Insert Domain
Descriptor: Interferon-induced helicase C domain-containing protein 1, SULFATE ION
Authors:Berke, I.C, Modis, Y.
Deposit date:2011-09-12
Release date:2012-02-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.003 Å)
Cite:MDA5 cooperatively forms dimers and ATP-sensitive filaments upon binding double-stranded RNA.
Embo J., 31, 2012
3TMZ
DownloadVisualize
BU of 3tmz by Molmil
Crystal Structure of P450 2B4(H226Y) in complex with Amlodipine
Descriptor: 5-CYCLOHEXYL-1-PENTYL-BETA-D-MALTOSIDE, Amlodipine, Cytochrome P450 2B4, ...
Authors:Shah, M.B, Pascual, J, Stout, C.D, Halpert, J.R.
Deposit date:2011-09-01
Release date:2012-09-12
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.248 Å)
Cite:Conformational Adaptation of Human Cytochrome P450 2B6 and Rabbit Cytochrome P450 2B4 Revealed upon Binding Multiple Amlodipine Molecules.
Biochemistry, 51, 2012
3R40
DownloadVisualize
BU of 3r40 by Molmil
Crystal Structure of the Fluoroacetate Dehalogenase RPA1163 - Asp110Asn/apo
Descriptor: CALCIUM ION, CHLORIDE ION, Fluoroacetate dehalogenase
Authors:Chan, P.W.Y, Yakunin, A.F, Edwards, E.A, Pai, E.F.
Deposit date:2011-03-16
Release date:2011-05-04
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Mapping the reaction coordinates of enzymatic defluorination.
J.Am.Chem.Soc., 133, 2011
3RGP
DownloadVisualize
BU of 3rgp by Molmil
Structural and Kinetic Analysis of the Beef liver Catalase complexed with Nitric Oxide
Descriptor: Catalase, NITRIC OXIDE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Purwar, N, Schmidt, M.
Deposit date:2011-04-08
Release date:2011-05-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Interaction of nitric oxide with catalase: structural and kinetic analysis.
Biochemistry, 50, 2011
3TG8
DownloadVisualize
BU of 3tg8 by Molmil
Mutant ribosomal protein L1 lacking ala158 from thermus thermophilus
Descriptor: 50S ribosomal protein L1, CHLORIDE ION, TETRAETHYLENE GLYCOL
Authors:Gabdulkhakov, A.G, Nevskaya, N.A, Nikonov, S.V.
Deposit date:2011-08-17
Release date:2011-12-07
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural analysis of interdomain mobility in ribosomal L1 proteins.
Acta Crystallogr.,Sect.D, 67, 2011
3TK3
DownloadVisualize
BU of 3tk3 by Molmil
Cytochrome P450 2B4 mutant L437A in complex with 4-(4-chlorophenyl)imidazole
Descriptor: 4-(4-CHLOROPHENYL)IMIDAZOLE, Cytochrome P450 2B4, PROTOPORPHYRIN IX CONTAINING FE
Authors:Gay, S.C, Jang, H.H, Wilderman, P.R, Zhang, Q, Stout, C.D, Halpert, J.R.
Deposit date:2011-08-25
Release date:2011-11-16
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.8001 Å)
Cite:Investigation by site-directed mutagenesis of the role of cytochrome P450 2B4 non-active-site residues in protein-ligand interactions based on crystal structures of the ligand-bound enzyme.
Febs J., 279, 2012
3U4W
DownloadVisualize
BU of 3u4w by Molmil
Src in complex with DNA-templated macrocyclic inhibitor MC4b
Descriptor: GLYCEROL, Proto-oncogene tyrosine-protein kinase Src, SULFATE ION, ...
Authors:Seeliger, M.A, Liu, D.R, Georghiou, G, Kleiner, R.E, Pulkoski-Gross, M.
Deposit date:2011-10-10
Release date:2012-02-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Highly specific, bisubstrate-competitive Src inhibitors from DNA-templated macrocycles.
Nat.Chem.Biol., 8, 2012
3QD8
DownloadVisualize
BU of 3qd8 by Molmil
Crystal structure of Mycobacterium tuberculosis BfrB
Descriptor: Probable bacterioferritin BfrB
Authors:Khare, G, Gupta, V, Nangpal, P, Gupta, R.K, Sauter, N.K, Tyagi, A.K.
Deposit date:2011-01-18
Release date:2011-04-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3 Å)
Cite:Ferritin Structure from Mycobacterium tuberculosis: Comparative Study with Homologues Identifies Extended C-Terminus Involved in Ferroxidase Activity
Plos One, 6, 2011
3QIL
DownloadVisualize
BU of 3qil by Molmil
Crystal structure analysis of the clathrin trimerization domain
Descriptor: Clathrin heavy chain 1
Authors:Ybe, J.A, Mishra, S, Nix, J.
Deposit date:2011-01-27
Release date:2012-02-01
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.92 Å)
Cite:Nuclear localization of clathrin involves a labile helix outside the trimerization domain.
Febs Lett., 587, 2013
3QOB
DownloadVisualize
BU of 3qob by Molmil
Mechanical Coupling Controls Cooperative Ligand Binding in a Homodimeric Hemoglobin
Descriptor: CARBON MONOXIDE, Globin-1, PROTOPORPHYRIN IX CONTAINING FE
Authors:Ren, Z.
Deposit date:2011-02-09
Release date:2020-06-03
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Cooperative macromolecular device revealed by meta-analysis of static and time-resolved structures.
Proc.Natl.Acad.Sci.USA, 109, 2012
3U8I
DownloadVisualize
BU of 3u8i by Molmil
Functionally selective inhibition of Group IIA phospholipase A2 reveals a role for vimentin in regulating arachidonic acid metabolism
Descriptor: CALCIUM ION, CHLORIDE ION, Phospholipase A2, ...
Authors:Lee, L.K, Bryant, K.J, Bouveret, R, Lei, P.-W, Duff, A.P, Harrop, S.J, Huang, E.P, Harvey, R.P, Gelb, M.H, Gray, P.P, Curmi, P.M, Cunningham, A.M, Church, W.B, Scott, K.F.
Deposit date:2011-10-17
Release date:2012-10-17
Last modified:2013-06-12
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Selective Inhibition of Human Group IIA-secreted Phospholipase A2 (hGIIA) Signaling Reveals Arachidonic Acid Metabolism Is Associated with Colocalization of hGIIA to Vimentin in Rheumatoid Synoviocytes.
J.Biol.Chem., 288, 2013
3U0Y
DownloadVisualize
BU of 3u0y by Molmil
Crystal structure of the Fucosylgalactoside alpha N-acetylgalactosaminyltransferase (GTA, cisAB mutant L266G, G268A) in complex with compound 382 and UDP
Descriptor: 1-(3-phenyl-1,2,4-thiadiazol-5-yl)piperazine, GLYCEROL, Histo-blood group ABO system transferase, ...
Authors:Palcic, M.M, Jorgensen, R.
Deposit date:2011-09-29
Release date:2012-10-24
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A novel compound from a molecular fragment library screen inhibits glycosyltransferases by displacing the metal ion and interfering with substrate binding
To be Published

223790

數據於2024-08-14公開中

PDB statisticsPDBj update infoContact PDBjnumon