Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6KB6
DownloadVisualize
BU of 6kb6 by Molmil
X-ray structure of human PPARalpha ligand binding domain-tetradecylthioacetic acid (TTA) co-crystals obtained by delipidation and cross-seeding
Descriptor: 2-tetradecylsulfanylethanoic acid, GLYCEROL, Peroxisome proliferator-activated receptor alpha
Authors:Kamata, S, Saito, K, Honda, A, Ishikawa, R, Oyama, T, Ishii, I.
Deposit date:2019-06-24
Release date:2020-11-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.431 Å)
Cite:PPAR alpha Ligand-Binding Domain Structures with Endogenous Fatty Acids and Fibrates.
Iscience, 23, 2020
4M7H
DownloadVisualize
BU of 4m7h by Molmil
Crystal structure of tetrameric fibrinogen-like recognition domain of FIBCD1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETIC ACID, CALCIUM ION, ...
Authors:Shrive, A.K, Greenhough, T.J, Holmskov, U.
Deposit date:2013-08-12
Release date:2013-12-11
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of the Tetrameric Fibrinogen-like Recognition Domain of Fibrinogen C Domain Containing 1 (FIBCD1) Protein.
J.Biol.Chem., 289, 2014
7KXK
DownloadVisualize
BU of 7kxk by Molmil
SARS-CoV-2 spike protein in complex with Fab 15033-7, 2-"up"-1-"down" conformation
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fab 15033-7 heavy chain, ...
Authors:Li, Z, Rini, J.
Deposit date:2020-12-04
Release date:2021-02-03
Last modified:2021-08-25
Method:ELECTRON MICROSCOPY (5 Å)
Cite:Tetravalent SARS-CoV-2 Neutralizing Antibodies Show Enhanced Potency and Resistance to Escape Mutations.
J.Mol.Biol., 433, 2021
4HMV
DownloadVisualize
BU of 4hmv by Molmil
Crystal structure of PhzG from Pseudomonas fluorescens 2-79 in complex with tetrahydrophenazine-1-carboxylic acid after 5 days of soaking
Descriptor: (1R,10aS)-1,2,10,10a-tetrahydrophenazine-1-carboxylic acid, FLAVIN MONONUCLEOTIDE, Phenazine biosynthesis protein phzG, ...
Authors:Xu, N.N, Ahuja, E.G, Blankenfeldt, W.
Deposit date:2012-10-18
Release date:2013-08-07
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Trapped intermediates in crystals of the FMN-dependent oxidase PhzG provide insight into the final steps of phenazine biosynthesis
Acta Crystallogr.,Sect.D, 69, 2013
3RH2
DownloadVisualize
BU of 3rh2 by Molmil
Crystal structure of a TetR-like transcriptional regulator (Sama_0099) from Shewanella amazonensis SB2B at 2.42 A resolution
Descriptor: GLYCEROL, Hypothetical TetR-like transcriptional regulator, PHOSPHATE ION, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2011-04-11
Release date:2011-05-04
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Crystal structure of a Hypothetical TetR-like transcriptional regulator (Sama_0099) from SHEWANELLA AMAZONENSIS SB2B at 2.42 A resolution
To be published
4HMU
DownloadVisualize
BU of 4hmu by Molmil
Crystal structure of PhzG from Pseudomonas fluorescens 2-79 in complex with tetrahydrophenazine-1-carboxylic acid after 1 day of soaking
Descriptor: (1R,10aS)-1,2,10,10a-tetrahydrophenazine-1-carboxylic acid, FLAVIN MONONUCLEOTIDE, Phenazine biosynthesis protein phzG, ...
Authors:Xu, N.N, Ahuja, E.G, Blankenfeldt, W.
Deposit date:2012-10-18
Release date:2013-08-07
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Trapped intermediates in crystals of the FMN-dependent oxidase PhzG provide insight into the final steps of phenazine biosynthesis
Acta Crystallogr.,Sect.D, 69, 2013
3RPS
DownloadVisualize
BU of 3rps by Molmil
Structure of human CK2alpha in complex with the ATP-competitive inhibitor 3-(4,5,6,7-tetrabromo-1H-benzotriazol-1-yl)propan-1-ol
Descriptor: 3-(4,5,6,7-tetrabromo-1H-benzotriazol-1-yl)propan-1-ol, CHLORIDE ION, Casein kinase II subunit alpha, ...
Authors:Bischoff, N, Raaf, J, Olsen, B, Bretner, M, Issinger, O.-G, Niefind, K.
Deposit date:2011-04-27
Release date:2011-06-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Enzymatic activity with an incomplete catalytic spine - insights from a comparative structural analysis of human CK2alpha and its paralogous isoform CK2alpha'
Mol.Cell.Biochem., 356, 2011
4HMX
DownloadVisualize
BU of 4hmx by Molmil
Crystal structure of PhzG from Burkholderia lata 383 in complex with tetrahydrophenazine-1-carboxylic acid
Descriptor: (1R,10aS)-1,2,10,10a-tetrahydrophenazine-1-carboxylic acid, FLAVIN MONONUCLEOTIDE, Pyridoxamine 5'-phosphate oxidase
Authors:Xu, N.N, Ahuja, E.G, Blankenfeldt, W.
Deposit date:2012-10-18
Release date:2013-08-07
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Trapped intermediates in crystals of the FMN-dependent oxidase PhzG provide insight into the final steps of phenazine biosynthesis
Acta Crystallogr.,Sect.D, 69, 2013
2PZI
DownloadVisualize
BU of 2pzi by Molmil
Crystal Structure of Protein kinase PknG from Mycobacterium tuberculosis in Complex with Tetrahydrobenzothiophene AX20017
Descriptor: 2-[(CYCLOPROPYLCARBONYL)AMINO]-4,5,6,7-TETRAHYDRO-1-BENZOTHIOPHENE-3-CARBOXAMIDE, CADMIUM ION, CHLORIDE ION, ...
Authors:Honnappa, S, Steinmetz, M.O.
Deposit date:2007-05-18
Release date:2007-07-24
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis for the specific inhibition of protein kinase G, a virulence factor of Mycobacterium tuberculosis.
Proc.Natl.Acad.Sci.Usa, 104, 2007
2KOC
DownloadVisualize
BU of 2koc by Molmil
NMR solution structure of a 14-mer hairpin RNA with cUUCGg tetraloop
Descriptor: RNA (5'-R(P*GP*GP*CP*AP*CP*UP*UP*CP*GP*GP*UP*GP*CP*C)-3')
Authors:Nozinovic, S, Fuertig, B, Jonker, H.R.A, Richter, C, Schwalbe, H.
Deposit date:2009-09-17
Release date:2009-12-01
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:High-resolution NMR structure of an RNA model system: the 14-mer cUUCGg tetraloop hairpin RNA
Nucleic Acids Res., 2009
6SJK
DownloadVisualize
BU of 6sjk by Molmil
Methyltransferase MtgA from Desulfitobacterium hafniense
Descriptor: GLYCEROL, Tetrahydromethanopterin S-methyltransferase
Authors:Badmann, T, Groll, M.
Deposit date:2019-08-13
Release date:2019-09-25
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structures in Tetrahydrofolate Methylation in Desulfitobacterial Glycine Betaine Metabolism at Atomic Resolution.
Chembiochem, 21, 2020
6SJP
DownloadVisualize
BU of 6sjp by Molmil
Methyltransferase of the MtgA N227A mutant from Desulfitobacterium hafniense
Descriptor: GLYCEROL, Tetrahydromethanopterin S-methyltransferase
Authors:Badmann, T, Groll, M.
Deposit date:2019-08-13
Release date:2019-09-25
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures in Tetrahydrofolate Methylation in Desulfitobacterial Glycine Betaine Metabolism at Atomic Resolution.
Chembiochem, 21, 2020
5GPA
DownloadVisualize
BU of 5gpa by Molmil
Structural analysis of fatty acid degradation regulator FadR from Bacillus halodurans
Descriptor: GLYCEROL, MAGNESIUM ION, Transcriptional regulator (TetR/AcrR family)
Authors:Lee, J.Y, Yeo, H.K, Park, Y.W.
Deposit date:2016-08-01
Release date:2017-03-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.051 Å)
Cite:Structural basis of operator sites recognition and effector binding in the TetR family transcription regulator FadR.
Nucleic Acids Res., 45, 2017
4XWN
DownloadVisualize
BU of 4xwn by Molmil
Complex structure of catalytic domain of Clostridium Cellulovorans Exgs and Cellotetraose
Descriptor: CALCIUM ION, Exoglucanase S, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose, ...
Authors:Liaw, Y.-C.
Deposit date:2015-01-29
Release date:2015-10-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.884 Å)
Cite:Structures of exoglucanase from Clostridium cellulovorans: cellotetraose binding and cleavage
Acta Crystallogr.,Sect.F, 71, 2015
5GPC
DownloadVisualize
BU of 5gpc by Molmil
Structural analysis of fatty acid degradation regulator FadR from Bacillus halodurans
Descriptor: DNA (5'-D(P*CP*AP*TP*GP*AP*AP*TP*GP*AP*GP*TP*AP*TP*TP*CP*AP*TP*TP*CP*AP*T)-3'), DNA (5'-D(P*GP*AP*TP*GP*AP*AP*TP*GP*AP*AP*TP*AP*CP*TP*CP*AP*TP*TP*CP*AP*T)-3'), Transcriptional regulator (TetR/AcrR family)
Authors:Lee, J.Y, Yeo, H.K, Park, T.W.
Deposit date:2016-08-01
Release date:2017-03-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis of operator sites recognition and effector binding in the TetR family transcription regulator FadR.
Nucleic Acids Res., 45, 2017
4A4S
DownloadVisualize
BU of 4a4s by Molmil
UNAC Tetraloops: To What Extent Can They Mimic GNRA Tetraloops
Descriptor: 5'-R(*GP*GP*AP*CP*CP*CP*GP*GP*CP*UP*CP*AP*CP*GP *CP*UP*GP*GP*GP*UP*CP*C)-3'
Authors:Zhao, Q, Huang, H, Nagaswamy, U, Xia, Y, Gao, X, Fox, G.
Deposit date:2011-10-20
Release date:2012-05-30
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Unac Tetraloops: To What Extent Can They Mimic Gnra Tetraloops
Biopolymers, 97, 2012
5GP9
DownloadVisualize
BU of 5gp9 by Molmil
Structural analysis of fatty acid degradation regulator FadR from Bacillus halodurans
Descriptor: GLYCEROL, MAGNESIUM ION, PALMITIC ACID, ...
Authors:Lee, J.Y, Yeo, H.K, Park, Y.W.
Deposit date:2016-08-01
Release date:2017-03-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.755 Å)
Cite:Structural basis of operator sites recognition and effector binding in the TetR family transcription regulator FadR.
Nucleic Acids Res., 45, 2017
6CHA
DownloadVisualize
BU of 6cha by Molmil
STRUCTURE OF A TETRAHEDRAL TRANSITION STATE COMPLEX OF ALPHA-*CHYMOTRYPSIN AT 1.8-*ANGSTROMS RESOLUTION
Descriptor: ALPHA-CHYMOTRYPSIN A, PHENYLETHANE BORONIC ACID
Authors:Tulinsky, A, Blevins, R.A.
Deposit date:1987-02-06
Release date:1987-04-16
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of a tetrahedral transition state complex of alpha-chymotrypsin dimer at 1.8-A resolution.
J.Biol.Chem., 262, 1987
6JNH
DownloadVisualize
BU of 6jnh by Molmil
Crystal structure of the complex of Phosphopantetheine adenylyltransferasefrom Acinetobacter baumannii with Ascorbic acid (Vitamin-C) at 2.0A resolution
Descriptor: ASCORBIC ACID, Phosphopantetheine adenylyltransferase, SODIUM ION, ...
Authors:Iqbal, N, Gupta, A, Sharm, P, Singh, T.P.
Deposit date:2019-03-14
Release date:2019-03-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the complex of Phosphopantetheine adenylyltransferase from Acinetobacter baumannii with Ascorbic acid (Vitamin-C) at 2.0A resolution
To Be Published
6PTP
DownloadVisualize
BU of 6ptp by Molmil
Joint X-ray/neutron structure of HIV-1 protease triple mutant (V32I,I47V,V82I) with tetrahedral intermediate mimic KVS-1
Descriptor: HIV-1 Protease, N~2~-[(2R,5S)-5-({(2S,3S)-2-[(N-acetyl-L-threonyl)amino]-3-methylpent-4-enoyl}amino)-2-butyl-4,4-dihydroxynonanoyl]-L-glutaminyl-L-argininamide
Authors:Kovalevsky, A, Das, A.
Deposit date:2019-07-16
Release date:2020-06-10
Last modified:2023-10-25
Method:NEUTRON DIFFRACTION (1.85 Å), X-RAY DIFFRACTION
Cite:Visualizing Tetrahedral Oxyanion Bound in HIV-1 Protease Using Neutrons: Implications for the Catalytic Mechanism and Drug Design.
Acs Omega, 5, 2020
5KID
DownloadVisualize
BU of 5kid by Molmil
Tightening the Recognition of Tetravalent Zr and Th Complexes by the Siderophore-Binding Mammalian Protein Siderocalin for Theranostic Applications
Descriptor: CHLORIDE ION, GLYCEROL, N,N'-(butane-1,4-diyl)bis(N-{3-[(2,3-dihydroxybenzene-1-carbonyl)amino]propyl}-2,3-dihydroxybenzamide), ...
Authors:Rupert, P.B, Strong, R.K.
Deposit date:2016-06-16
Release date:2017-04-26
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Engineered Recognition of Tetravalent Zirconium and Thorium by Chelator-Protein Systems: Toward Flexible Radiotherapy and Imaging Platforms.
Inorg Chem, 55, 2016
5KHP
DownloadVisualize
BU of 5khp by Molmil
Tightening the Recognition of Tetravalent Zr and Th Complexes by the Siderophore-Binding Mammalian Protein Siderocalin for Theranostic Applications
Descriptor: GLYCEROL, N,N'-(butane-1,4-diyl)bis(N-{3-[(2,3-dihydroxybenzene-1-carbonyl)amino]propyl}-2,3-dihydroxybenzamide), Neutrophil gelatinase-associated lipocalin, ...
Authors:Rupert, P.B, Strong, R.K.
Deposit date:2016-06-15
Release date:2017-04-26
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Engineered Recognition of Tetravalent Zirconium and Thorium by Chelator-Protein Systems: Toward Flexible Radiotherapy and Imaging Platforms.
Inorg Chem, 55, 2016
4A4R
DownloadVisualize
BU of 4a4r by Molmil
UNAC Tetraloops: To What Extent Can They Mimic GNRA Tetraloops
Descriptor: 5'-R(*GMP*GP*AP*CP*CP*CP*GP*GP*CP*UP*AP*AP*CP*GP *CP*UP*GP*GP*GP*UP*CP*C)-3'
Authors:Zhao, Q, Huang, H, Nagaswamy, U, Xia, Y, Gao, X, Fox, G.
Deposit date:2011-10-20
Release date:2012-05-30
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Unac Tetraloops: To What Extent Can They Mimic Gnra Tetraloops
Biopolymers, 97, 2012
3LLN
DownloadVisualize
BU of 3lln by Molmil
Comparison between the orthorhombic an tetragonal form of the heptamer sequence d(GCG(xT)GCG)/d(CGCACGC).
Descriptor: COBALT HEXAMMINE(III), DNA (5'-D(*CP*GP*CP*AP*CP*GP*C)-3'), DNA (5'-D(*GP*CP*GP*(XTR)P*GP*CP*G)-3')
Authors:Robeyns, K, Herdewijn, P, Van Meervelt, L.
Deposit date:2010-01-29
Release date:2010-08-18
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (3 Å)
Cite:Comparison between the orthorhombic and tetragonal forms of the heptamer sequence d[GCG(xT)GCG]/d(CGCACGC)
Acta Crystallogr.,Sect.F, 66, 2010
4O8P
DownloadVisualize
BU of 4o8p by Molmil
Crystal structure of SthAraf62A, a GH62 family alpha-L-arabinofuranosidase from Streptomyces thermoviolaceus, bound to xylotetraose
Descriptor: 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, Alpha-L-arabinofuranosidase, CALCIUM ION, ...
Authors:Stogios, P.J, Wang, W, Xu, X, Cui, H, Master, E, Savchenko, A.
Deposit date:2013-12-28
Release date:2014-07-02
Last modified:2022-08-24
Method:X-RAY DIFFRACTION (1.557 Å)
Cite:Elucidation of the molecular basis for arabinoxylan-debranching activity of a thermostable family GH62 alpha-l-arabinofuranosidase from Streptomyces thermoviolaceus.
Appl.Environ.Microbiol., 80, 2014

223532

數據於2024-08-07公開中

PDB statisticsPDBj update infoContact PDBjnumon