Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1ELE
DownloadVisualize
BU of 1ele by Molmil
STRUCTURAL ANALYSIS OF THE ACTIVE SITE OF PORCINE PANCREATIC ELASTASE BASED ON THE X-RAY CRYSTAL STRUCTURES OF COMPLEXES WITH TRIFLUOROACETYL-DIPEPTIDE-ANILIDE INHIBITORS
Descriptor: CALCIUM ION, ELASTASE, N-(trifluoroacetyl)-L-valyl-N-[4-(trifluoromethyl)phenyl]-L-alaninamide, ...
Authors:Mattos, C, Petsko, G.A, Ringe, D.
Deposit date:1994-10-24
Release date:1995-02-14
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural analysis of the active site of porcine pancreatic elastase based on the X-ray crystal structures of complexes with trifluoroacetyl-dipeptide-anilide inhibitors.
Biochemistry, 34, 1995
1ELB
DownloadVisualize
BU of 1elb by Molmil
Analogous inhibitors of elastase do not always bind analogously
Descriptor: 6-ammonio-N-(trifluoroacetyl)-L-norleucyl-N-[4-(1-methylethyl)phenyl]-L-leucinamide, CALCIUM ION, ELASTASE, ...
Authors:Mattos, C, Rasmussen, B, Ding, X, Petsko, G.A, Ringe, D.
Deposit date:1993-12-07
Release date:1994-06-22
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Analogous inhibitors of elastase do not always bind analogously.
Nat.Struct.Biol., 1, 1994
2F5N
DownloadVisualize
BU of 2f5n by Molmil
MutM crosslinked to undamaged DNA sampling A:T base pair IC1
Descriptor: 5'-D(*AP*GP*GP*TP*AP*GP*AP*CP*CP*TP*GP*GP*AP*CP*GP*C)-3', 5'-D(*TP*GP*C*GP*TP*CP*CP*AP*GP*GP*TP*CP*TP*AP*CP*C)-3', GLYCEROL, ...
Authors:Banerjee, A, Santos, W.L, Verdine, G.L.
Deposit date:2005-11-26
Release date:2006-03-07
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of a DNA glycosylase searching for lesions.
Science, 311, 2006
1ELD
DownloadVisualize
BU of 1eld by Molmil
Structural analysis of the active site of porcine pancreatic elastase based on the x-ray crystal structures of complexes with trifluoroacetyl-dipeptide-anilide inhibitors
Descriptor: ACETIC ACID, CALCIUM ION, ELASTASE, ...
Authors:Mattos, C, Petsko, G.A, Ringe, D.
Deposit date:1994-10-24
Release date:1995-02-14
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural analysis of the active site of porcine pancreatic elastase based on the X-ray crystal structures of complexes with trifluoroacetyl-dipeptide-anilide inhibitors.
Biochemistry, 34, 1995
2K4C
DownloadVisualize
BU of 2k4c by Molmil
tRNAPhe-based homology model for tRNAVal refined against base N-H RDCs in two media and SAXS data
Descriptor: 76-MER
Authors:Grishaev, A, Ying, J, Canny, M.D, Pardi, A, Bax, A.
Deposit date:2008-06-04
Release date:2008-12-09
Last modified:2024-05-01
Method:SOLUTION NMR, SOLUTION SCATTERING
Cite:Solution structure of tRNAVal from refinement of homology model against residual dipolar coupling and SAXS data.
J.Biomol.Nmr, 42, 2008
3BXJ
DownloadVisualize
BU of 3bxj by Molmil
Crystal Structure of the C2-GAP Fragment of synGAP
Descriptor: Ras GTPase-activating protein SynGAP
Authors:Pena, V, Hothorn, M, Eberth, A, Kaschau, N, Parret, A, Gremer, L, Bonneau, F, Ahmadian, M.R, Scheffzek, K.
Deposit date:2008-01-14
Release date:2008-03-25
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3 Å)
Cite:The C2 domain of SynGAP is essential for stimulation of the Rap GTPase reaction.
Embo Rep., 9, 2008
3BN3
DownloadVisualize
BU of 3bn3 by Molmil
crystal structure of ICAM-5 in complex with aL I domain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
Authors:Zhang, H, Springer, T.A, Wang, J.-h.
Deposit date:2007-12-13
Release date:2008-08-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.099 Å)
Cite:An unusual allosteric mobility of the C-terminal helix of a high-affinity alpha L integrin I domain variant bound to ICAM-5
Mol.Cell, 31, 2008
2KOE
DownloadVisualize
BU of 2koe by Molmil
Human cannabinoid receptor 1 - helix 7/8 peptide
Descriptor: human cannabinoid receptor 1 - helix 7/8 peptide
Authors:Deshmukh, L, Vinogradova, O, Makriyannis, A, Tiburu, E, Tyukhtenko, S, Janero, D.
Deposit date:2009-09-18
Release date:2009-10-06
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:NMR solution structure of human cannabinoid receptor-1 helix 7/8 peptide: candidate electrostatic interactions and microdomain formation.
Biochem.Biophys.Res.Commun., 390, 2009
4Q3N
DownloadVisualize
BU of 4q3n by Molmil
Crystal structure of MGS-M5, a lactate dehydrogenase enzyme from a Medee basin deep-sea metagenome library
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, CHLORIDE ION, ...
Authors:Stogios, P.J, Xu, X, Cui, H, Alcaide, M, Ferrer, M, Savchenko, A.
Deposit date:2014-04-11
Release date:2015-02-25
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Pressure adaptation is linked to thermal adaptation in salt-saturated marine habitats.
Environ Microbiol, 17, 2015
2KYV
DownloadVisualize
BU of 2kyv by Molmil
Hybrid solution and solid-state NMR structure ensemble of phospholamban pentamer
Descriptor: Phospholamban
Authors:Verardi, R, Shi, L, Traaseth, N.J, Veglia, G.
Deposit date:2010-06-08
Release date:2011-05-11
Last modified:2024-05-01
Method:SOLID-STATE NMR, SOLUTION NMR
Cite:Structural topology of phospholamban pentamer in lipid bilayers by a hybrid solution and solid-state NMR method.
Proc.Natl.Acad.Sci.USA, 108, 2011
2K8E
DownloadVisualize
BU of 2k8e by Molmil
Solution NMR Structure of protein of unknown function yegP from E. coli. Ontario Center for Structural Proteomics target EC0640_1_123 Northeast Structural Genomics Consortium Target ET102.
Descriptor: UPF0339 protein yegP
Authors:Fares, C, Lemak, A, Gutmanas, A, Karra, M, Yee, A.H, Semesi, A, Arrowsmith, C.H, Northeast Structural Genomics Consortium (NESG), Ontario Centre for Structural Proteomics (OCSP)
Deposit date:2008-09-08
Release date:2008-10-14
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Solution structure of protein yegP from Escherichia Coli.
To be Published
4Q3O
DownloadVisualize
BU of 4q3o by Molmil
Crystal structure of MGS-MT1, an alpha/beta hydrolase enzyme from a Lake Matapan deep-sea metagenome library
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, GLYCEROL, ...
Authors:Stogios, P.J, Xu, X, Cui, H, Alcaide, M, Ferrer, M, Savchenko, A.
Deposit date:2014-04-11
Release date:2015-03-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Pressure adaptation is linked to thermal adaptation in salt-saturated marine habitats.
Environ Microbiol, 17, 2015
3AAP
DownloadVisualize
BU of 3aap by Molmil
Crystal Structure of Lp1NTPDase from Legionella pneumophila
Descriptor: Ectonucleoside triphosphate diphosphohydrolase I
Authors:Vivian, J.P, Beddoe, T, Rossjohn, J.
Deposit date:2009-11-24
Release date:2010-02-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal Structure of a Legionella pneumophila Ecto -Triphosphate Diphosphohydrolase, A Structural and Functional Homolog of the Eukaryotic NTPDases
Structure, 18, 2010
3BY7
DownloadVisualize
BU of 3by7 by Molmil
CRYSTAL STRUCTURE OF A PROTEIN STRUCTURALLY SIMILAR TO SM/LSM-LIKE RNA-BINDING PROTEINS (JCVI_PEP_1096686650277) FROM UNCULTURED MARINE ORGANISM AT 2.60 A RESOLUTION
Descriptor: uncharacterized protein
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2008-01-15
Release date:2008-01-29
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of a novel Sm-like protein of putative cyanophage origin at 2.60 A resolution.
Proteins, 75, 2009
2F5O
DownloadVisualize
BU of 2f5o by Molmil
MutM crosslinked to undamaged DNA sampling G:C base pair IC3
Descriptor: 5'-D(*AP*GP*GP*TP*AP*GP*AP*TP*CP*CP*GP*GP*AP*CP*GP*C)-3', 5'-D(*TP*GP*C*GP*TP*CP*CP*GP*GP*AP*TP*CP*TP*AP*CP*C)-3', GLYCEROL, ...
Authors:Banerjee, A, Santos, W.L, Verdine, G.L.
Deposit date:2005-11-26
Release date:2006-03-07
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structure of a DNA glycosylase searching for lesions.
Science, 311, 2006
2KV9
DownloadVisualize
BU of 2kv9 by Molmil
Integrin beta3 subunit in a disulfide linked alphaIIb-beta3 cytosolic domain
Descriptor: Integrin beta-3
Authors:Metcalf, D.G, Kielec, J.M, Valentine, K.G, Wand, A, Bennett, J.S, William, D.F, Moore, D.T, Molnar, K.
Deposit date:2010-03-10
Release date:2011-01-12
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR analysis of the {alpha}IIb{beta}3 cytoplasmic interaction suggests a mechanism for integrin regulation.
Proc.Natl.Acad.Sci.USA, 107, 2010
2FBS
DownloadVisualize
BU of 2fbs by Molmil
Solution structure of the LL-37 core peptide bound to detergent micelles
Descriptor: Antibacterial protein FALL-39, core peptide
Authors:Wang, G, Li, X.
Deposit date:2005-12-10
Release date:2006-05-23
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Solution Structures of Human LL-37 Fragments and NMR-Based Identification of a Minimal Membrane-Targeting Antimicrobial and Anticancer Region
J.Am.Chem.Soc., 128, 2006
2LE7
DownloadVisualize
BU of 2le7 by Molmil
Solution nmr structure of the S4S5 linker of herg potassium channel
Descriptor: Potassium voltage-gated channel subfamily H member 2
Authors:Ng, C.A, Kuchel, P.W, Vandenberg, J.I.
Deposit date:2011-06-13
Release date:2012-04-25
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The S4-S5 linker acts as a signal integrator for HERG K+ channel activation and deactivation gating
Plos One, 7, 2012
2L4R
DownloadVisualize
BU of 2l4r by Molmil
NMR solution structure of the N-terminal PAS domain of hERG
Descriptor: Potassium voltage-gated channel subfamily H member 2
Authors:Gayen, N, Li, Q, Chen, A.S, Huang, Q, Raida, M, Kang, C.
Deposit date:2010-10-13
Release date:2010-12-22
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:NMR solution structure of the N-terminal domain of hERG and its interaction with the S4-S5 linker.
Biochem.Biophys.Res.Commun., 403, 2010
7BUT
DownloadVisualize
BU of 7but by Molmil
N-terminal domain (NTD) Solution structure of aciniform spidroin (AcSpN) from Nephila antipodiana.
Descriptor: Aciniform Spidroin
Authors:Fan, J.S, Yang, D.W.
Deposit date:2020-04-08
Release date:2020-07-22
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural Basis of Oligomerization of N-Terminal Domain of Spider Aciniform Silk Protein.
Int J Mol Sci, 21, 2020
6XU1
DownloadVisualize
BU of 6xu1 by Molmil
Crystal structure of tetrameric human H215A-SAMHD1 (residues 109-626) with GTP, dAMPNPP and Mg
Descriptor: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine, Deoxynucleoside triphosphate triphosphohydrolase SAMHD1, FE (III) ION, ...
Authors:Morris, E.R, Kunzelmann, S, Caswell, S.J, Arnold, L.H, Purkiss, A.G, Kelly, G, Taylor, I.A.
Deposit date:2020-01-17
Release date:2020-06-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of SAMHD1 inhibitor complexes reveal the mechanism of water-mediated dNTP hydrolysis.
Nat Commun, 11, 2020
2LNQ
DownloadVisualize
BU of 2lnq by Molmil
40-residue D23N beta amyloid fibril
Descriptor: P3(40)
Authors:Qiang, W, Yau, W, Luo, Y, Mattson, M.P, Tycko, R.
Deposit date:2012-01-03
Release date:2012-02-08
Last modified:2024-05-15
Method:SOLID-STATE NMR
Cite:Antiparallel beta-sheet architecture in Iowa-mutant beta-amyloid fibrils.
Proc.Natl.Acad.Sci.USA, 109, 2012
6IFL
DownloadVisualize
BU of 6ifl by Molmil
Cryo-EM structure of type III-A Csm-NTR complex
Descriptor: NTR, Type III-A CRISPR-associated RAMP protein Csm3, Type III-A CRISPR-associated RAMP protein Csm4, ...
Authors:You, L, Ma, J, Wang, J, Zhang, X, Wang, Y.
Deposit date:2018-09-20
Release date:2018-12-12
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.16 Å)
Cite:Structure Studies of the CRISPR-Csm Complex Reveal Mechanism of Co-transcriptional Interference
Cell, 176, 2019
6YPE
DownloadVisualize
BU of 6ype by Molmil
Crystal structure of the human neuronal pentraxin 1 (NP1) pentraxin (PTX) domain.
Descriptor: CACODYLATE ION, CALCIUM ION, Neuronal pentraxin-1
Authors:Elegheert, J, Clayton, A.J, Aricescu, A.R.
Deposit date:2020-04-15
Release date:2020-06-03
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:A synthetic synaptic organizer protein restores glutamatergic neuronal circuits.
Science, 369, 2020
7VIG
DownloadVisualize
BU of 7vig by Molmil
Cryo-EM structure of Gi coupled Sphingosine 1-phosphate receptor bound with CBP-307
Descriptor: 1-[[2-fluoranyl-4-[5-[4-(2-methylpropyl)phenyl]-1,2,4-oxadiazol-3-yl]phenyl]methyl]azetidine-3-carboxylic acid, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Yu, L.Y, Gan, B, Xiao, Q.J, Ren, R.B.
Deposit date:2021-09-26
Release date:2022-09-28
Last modified:2022-10-05
Method:ELECTRON MICROSCOPY (2.89 Å)
Cite:Structural insights into sphingosine-1-phosphate receptor activation.
Proc.Natl.Acad.Sci.USA, 119, 2022

225946

數據於2024-10-09公開中

PDB statisticsPDBj update infoContact PDBjnumon