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4QEI
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BU of 4qei by Molmil
Two distinct conformational states of GlyRS captured in crystal lattice
Descriptor: ADENOSINE MONOPHOSPHATE, Glycine--tRNA ligase, tRNA-Gly-CCC-2-2
Authors:Xie, W, Qin, X, Deng, X, Zhang, Q, Li, Q.
Deposit date:2014-05-16
Release date:2015-05-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.875 Å)
Cite:Large Conformational Changes of Insertion 3 in Human Glycyl-tRNA Synthetase (hGlyRS) during Catalysis
J.Biol.Chem., 291, 2016
5OBN
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BU of 5obn by Molmil
NMR solution structure of U11/U12 65K protein's C-terminal RRM domain (381-516)
Descriptor: RNA-binding protein 40
Authors:Norppa, A.J, Kauppala, T.M, Heikkinen, H.A, Verma, B, Iwai, H, Frilander, M.J.
Deposit date:2017-06-28
Release date:2018-01-24
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Mutations in the U11/U12-65K protein associated with isolated growth hormone deficiency lead to structural destabilization and impaired binding of U12 snRNA.
RNA, 24, 2018
8G9Z
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BU of 8g9z by Molmil
High-resolution crystal structure of the human selenomethionine-derived SepSecS-tRNASec complex
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, (5-HYDROXY-4,6-DIMETHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE, O-phosphoseryl-tRNA(Sec) selenium transferase, ...
Authors:Puppala, A, Simonovic, M, Castillo Suchkou, J.
Deposit date:2023-02-22
Release date:2023-04-05
Last modified:2023-05-17
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Structural basis for the tRNA-dependent activation of the terminal complex of selenocysteine synthesis in humans.
Nucleic Acids Res., 51, 2023
5YYN
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BU of 5yyn by Molmil
Crystal structures of E.coli arginyl-trna synthetase (argrs) in complex with substrate TRNA(Arg)
Descriptor: Arginine--tRNA ligase, TRNA
Authors:Zhou, M, Ye, S, Stephen, P, Zhang, R.G, Wang, E.D, Giege, R, Lin, S.X.
Deposit date:2017-12-10
Release date:2018-12-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal Structures Of E.Coli Arginyl-Trna Synthetase (Argrs) In Complex With Substrates
To Be Published
1QZC
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BU of 1qzc by Molmil
Coordinates of S12, SH44, LH69 and SRL separately fitted into the cryo-EM map of EF-Tu ternary complex (GDP.Kirromycin) bound 70S ribosome
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S12
Authors:Valle, M, Zavialov, A, Li, W, Stagg, S.M, Sengupta, J, Nielsen, R.C, Nissen, P, Harvey, S.C, Ehrenberg, M, Frank, J.
Deposit date:2003-09-16
Release date:2003-11-04
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (9 Å)
Cite:Incorporation of Aminoacyl-tRNA into the Ribosome as seen by Cryo-electron Microscopy
Nat.Struct.Biol., 10, 2003
6LSP
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BU of 6lsp by Molmil
Crystal structure of a dimeric Piptidyl t-RNA hydrolase from Acinetobacter baumannii at 1.50 A resolution reveals an inhibited form.
Descriptor: Peptidyl-tRNA hydrolase
Authors:Viswanathan, V, Ahmad, M.I, Sharma, P, Sharma, S, Singh, T.P.
Deposit date:2020-01-18
Release date:2020-02-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of a dimeric Piptidyl t-RNA hydrolase from Acinetobacter baumannii at 1.50 A resolution reveals on inhibited form.
To Be Published
6JQT
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BU of 6jqt by Molmil
Crystal structure of ordered Asn70 and Asn116 in native peptidyl t-RNA hydrolase from Acinetobacter baumannii at 1.80 Angstrom resolution.
Descriptor: Peptidyl-tRNA hydrolase
Authors:Viswanathan, V, Sharma, P, Sharma, S, Singh, T.P.
Deposit date:2019-04-01
Release date:2019-04-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of ordered Asn70 and Asn116 in native peptidyl t-RNA hydrolase from Acinetobacter baumannii at 1.80 Angstrom resolution.
To Be Published
7NU1
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BU of 7nu1 by Molmil
Crystal Structure of Neisseria gonorrhoeae LeuRS E169G mutant
Descriptor: Leucine--tRNA ligase, MAGNESIUM ION, ZINC ION
Authors:Pang, L, Strelkov, S.V, Weeks, S.D.
Deposit date:2021-03-11
Release date:2022-08-31
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Partitioning of the initial catalytic steps of leucyl-tRNA synthetase is driven by an active site peptide-plane flip.
Commun Biol, 5, 2022
7NUA
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BU of 7nua by Molmil
Crystal Structure of Neisseria gonorrhoeae LeuRS L550G mutant
Descriptor: Leucine--tRNA ligase, MAGNESIUM ION, ZINC ION
Authors:Pang, L, Strelkov, S.V, Weeks, S.D.
Deposit date:2021-03-11
Release date:2022-08-31
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.09 Å)
Cite:Partitioning of the initial catalytic steps of leucyl-tRNA synthetase is driven by an active site peptide-plane flip.
Commun Biol, 5, 2022
7NUB
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BU of 7nub by Molmil
Crystal Structure of Neisseria gonorrhoeae LeuRS L550G mutant in Complex with the Reaction Intermediate Leu-AMP
Descriptor: Leucine--tRNA ligase, MAGNESIUM ION, ZINC ION, ...
Authors:Pang, L, Strelkov, S.V, Weeks, S.D.
Deposit date:2021-03-11
Release date:2022-08-31
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.02 Å)
Cite:Partitioning of the initial catalytic steps of leucyl-tRNA synthetase is driven by an active site peptide-plane flip.
Commun Biol, 5, 2022
7NTY
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BU of 7nty by Molmil
Crystal Structure of Neisseria gonorrhoeae LeuRS L550A mutant
Descriptor: Leucine--tRNA ligase, MAGNESIUM ION, ZINC ION
Authors:Pang, L, Strelkov, S.V, Weeks, S.D.
Deposit date:2021-03-11
Release date:2022-08-31
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Partitioning of the initial catalytic steps of leucyl-tRNA synthetase is driven by an active site peptide-plane flip.
Commun Biol, 5, 2022
7NTZ
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BU of 7ntz by Molmil
Crystal Structure of Neisseria gonorrhoeae LeuRS L550A mutant in Complex with the Reaction Intermediate Leu-AMP
Descriptor: Leucine--tRNA ligase, MAGNESIUM ION, ZINC ION, ...
Authors:Pang, L, Strelkov, S.V, Weeks, S.D.
Deposit date:2021-03-11
Release date:2022-08-31
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Partitioning of the initial catalytic steps of leucyl-tRNA synthetase is driven by an active site peptide-plane flip.
Commun Biol, 5, 2022
1R2X
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BU of 1r2x by Molmil
Coordinates of L11 with 58nts of 23S rRNA fitted into the cryo-EM map of EF-Tu ternary complex (GDP.Kirromycin) bound 70S ribosome
Descriptor: 50S ribosomal protein L11, 58nts of 23S rRNA
Authors:Valle, M, Zavialov, A, Li, W, Stagg, S.M, Sengupta, J, Nielsen, R.C, Nissen, P, Harvey, S.C, Ehrenberg, M, Frank, J.
Deposit date:2003-09-30
Release date:2003-11-04
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (9 Å)
Cite:Incorporation of aminoacyl-tRNA into the ribosome as seen by cryo-electron Microscopy
Nat.Struct.Biol., 10, 2003
1R2W
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BU of 1r2w by Molmil
Coordinates of L11 with 58nts of 23S rRNA fitted into the cryo-EM map of the 70S ribosome
Descriptor: 50S ribosomal protein L11, 58nts of 23S rRNA
Authors:Valle, M, Zavialov, A, Li, W, Stagg, S.M, Sengupta, J, Nielsen, R.C, Nissen, P, Harvey, S.C, Ehrenberg, M, Frank, J.
Deposit date:2003-09-30
Release date:2003-11-04
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (9 Å)
Cite:Incorporation of aminoacyl-tRNA into the ribosome as seen by cryo-electron Microscopy
Nat.Struct.Biol., 10, 2003
7MDL
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BU of 7mdl by Molmil
High-resolution crystal structure of human SepSecS-tRNASec complex
Descriptor: (5-HYDROXY-4,6-DIMETHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE, CITRATE ANION, O-phosphoseryl-tRNA(Sec) selenium transferase, ...
Authors:Puppala, A, French, R.L, Simonovic, M.
Deposit date:2021-04-05
Release date:2022-11-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Structural basis for the tRNA-dependent activation of the terminal complex of selenocysteine synthesis in humans.
Nucleic Acids Res., 2023
7N8Y
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BU of 7n8y by Molmil
Oxidized PheRS G318W from Salmonella enterica serovar Typhimurium
Descriptor: Phenylalanine--tRNA ligase alpha subunit, Phenylalanine--tRNA ligase beta subunit
Authors:Srinivas, P, Dunham, C.M.
Deposit date:2021-06-16
Release date:2021-10-06
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.65 Å)
Cite:Oxidation alters the architecture of the phenylalanyl-tRNA synthetase editing domain to confer hyperaccuracy.
Nucleic Acids Res., 49, 2021
4K0K
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BU of 4k0k by Molmil
Crystal structure of the Thermus thermophilus 30S ribosomal subunit complexed with a serine-ASL and mRNA containing a stop codon
Descriptor: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Fernandez, I.S, Ng, C.L, Kelley, A.C, Guowei, W, Yu, Y.T, Ramakrishnan, V.
Deposit date:2013-04-04
Release date:2013-06-26
Last modified:2013-08-21
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Unusual base pairing during the decoding of a stop codon by the ribosome.
Nature, 500, 2013
8FZR
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BU of 8fzr by Molmil
CryoEM structure of yeast Arginyltransferase 1 (ATE1)
Descriptor: Arg tRNA, Arginyl-tRNA--protein transferase 1, ZINC ION
Authors:Huang, W, Zhang, Y, Taylor, D.J.
Deposit date:2023-01-29
Release date:2023-04-26
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:The structural basis of tRNA recognition by arginyl-tRNA-protein transferase.
Nat Commun, 14, 2023
6HB7
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BU of 6hb7 by Molmil
Crystal structure of E. coli tyrRS in complex with 5'-O-(N-L-tyrosyl)sulfamoyl-N3-methyluridine
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Tyrosine--tRNA ligase, ...
Authors:De Graef, S, Pang, L, Strelkov, S.V, Weeks, S.D.
Deposit date:2018-08-09
Release date:2019-04-17
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Comparative analysis of pyrimidine substituted aminoacyl-sulfamoyl nucleosides as potential inhibitors targeting class I aminoacyl-tRNA synthetases.
Eur.J.Med.Chem., 173, 2019
6HB5
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BU of 6hb5 by Molmil
Crystal structure of E. coli tyrRS in complex with 5'-O-(N-L-tyrosyl)sulfamoyl-cytidine
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Tyrosine--tRNA ligase, ...
Authors:De Graef, S, Pang, L, Strelkov, S.V, Weeks, S.D.
Deposit date:2018-08-09
Release date:2019-04-17
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Comparative analysis of pyrimidine substituted aminoacyl-sulfamoyl nucleosides as potential inhibitors targeting class I aminoacyl-tRNA synthetases.
Eur.J.Med.Chem., 173, 2019
6I5Y
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BU of 6i5y by Molmil
Crystal structure of E. coli tyrRS in complex with 5'-O-(N-L-tyrosyl)sulfamoyl-adenosine
Descriptor: 1,2-ETHANEDIOL, 5'-O-[N-(L-TYROSYL)SULFAMOYL]ADENOSINE, Tyrosine--tRNA ligase
Authors:De Graef, S, Pang, L, Strelkov, S.V, Weeks, S.D.
Deposit date:2018-11-15
Release date:2019-04-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Comparative analysis of pyrimidine substituted aminoacyl-sulfamoyl nucleosides as potential inhibitors targeting class I aminoacyl-tRNA synthetases.
Eur.J.Med.Chem., 173, 2019
6HB6
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BU of 6hb6 by Molmil
Crystal structure of E. coli tyrRS in complex with 5'-O-(N-L-tyrosyl)sulfamoyl-uridine
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Tyrosine--tRNA ligase, ...
Authors:De Graef, S, Pang, L, Strelkov, S.V, Weeks, S.D.
Deposit date:2018-08-09
Release date:2019-04-17
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Comparative analysis of pyrimidine substituted aminoacyl-sulfamoyl nucleosides as potential inhibitors targeting class I aminoacyl-tRNA synthetases.
Eur.J.Med.Chem., 173, 2019
7YDG
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BU of 7ydg by Molmil
Crystal structure of human SARS2 catalytic domain with a disease related mutation
Descriptor: Serine--tRNA ligase, mitochondrial
Authors:Wu, S, Li, P, Zhou, X.L, Fang, P.
Deposit date:2022-07-04
Release date:2022-11-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Selective degradation of tRNASer(AGY) is the primary driver for mitochondrial seryl-tRNA synthetase-related disease.
Nucleic Acids Res., 50, 2022
7YDF
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BU of 7ydf by Molmil
Crystal structure of human SARS2 catalytic domain
Descriptor: Serine--tRNA ligase, mitochondrial
Authors:Wu, S, Li, P, Zhou, X.L, Fang, P.
Deposit date:2022-07-04
Release date:2022-11-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Selective degradation of tRNASer(AGY) is the primary driver for mitochondrial seryl-tRNA synthetase-related disease.
Nucleic Acids Res., 50, 2022
3W1K
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BU of 3w1k by Molmil
Crystal structure of the selenocysteine synthase SelA and tRNASec complex
Descriptor: L-seryl-tRNA(Sec) selenium transferase, selenocysteine tRNA
Authors:Itoh, Y, Sekine, S, Yokoyama, S.
Deposit date:2012-11-15
Release date:2013-06-05
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (7.5 Å)
Cite:Decameric SelA-tRNA(Sec) ring structure reveals mechanism of bacterial selenocysteine formation
Science, 340, 2013

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數據於2024-09-11公開中

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