Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

8PFI
DownloadVisualize
BU of 8pfi by Molmil
Crystal structure of human TLR8 in complex with compound 34
Descriptor: (3~{S})-~{N}-[4-[[5-(1,6-dimethylpyrazolo[3,4-b]pyridin-4-yl)-3-methyl-6,7-dihydro-4~{H}-pyrazolo[4,3-c]pyridin-1-yl]methyl]-1-bicyclo[2.2.2]octanyl]morpholine-3-carboxamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, Toll-like receptor 8, ...
Authors:Faller, M, Zink, F.
Deposit date:2023-06-16
Release date:2023-08-16
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.785 Å)
Cite:Discovery of the TLR7/8 Antagonist MHV370 for Treatment of Systemic Autoimmune Diseases.
Acs Med.Chem.Lett., 14, 2023
8F77
DownloadVisualize
BU of 8f77 by Molmil
LRRC8A(T48D):C conformation 2 top focus
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, Volume-regulated anion channel subunit LRRC8A,Soluble cytochrome b562, Volume-regulated anion channel subunit LRRC8C
Authors:Kern, D.M, Brohawn, S.G.
Deposit date:2022-11-18
Release date:2023-03-08
Last modified:2023-07-05
Method:ELECTRON MICROSCOPY (3.15 Å)
Cite:Structural basis for assembly and lipid-mediated gating of LRRC8A:C volume-regulated anion channels.
Nat.Struct.Mol.Biol., 30, 2023
4WLP
DownloadVisualize
BU of 4wlp by Molmil
Crystal structure of UCH37-NFRKB Inhibited Deubiquitylating Complex
Descriptor: Nuclear factor related to kappa-B-binding protein, Ubiquitin carboxyl-terminal hydrolase isozyme L5
Authors:Hemmis, C.W, Hill, C.P, VanderLinden, R, Whitby, F.G.
Deposit date:2014-10-07
Release date:2015-03-04
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.102 Å)
Cite:Structural Basis for the Activation and Inhibition of the UCH37 Deubiquitylase.
Mol.Cell, 57, 2015
6N3O
DownloadVisualize
BU of 6n3o by Molmil
Identification of novel, potent and selective GCN2 inhibitors as first-in-class anti-tumor agents
Descriptor: N-{3-[(2-aminopyrimidin-5-yl)ethynyl]-2,4-difluorophenyl}-5-chloro-2-methoxypyridine-3-sulfonamide, eIF-2-alpha kinase GCN2
Authors:Hoffman, I.D, Fujimoto, J, Kurasawa, O, Takagi, T, Klein, M.G, Kefala, G, Ding, S.C, Cary, D.R, Mizojiri, R.
Deposit date:2018-11-15
Release date:2019-10-09
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Identification of Novel, Potent, and Orally Available GCN2 Inhibitors with Type I Half Binding Mode.
Acs Med.Chem.Lett., 10, 2019
7ZO8
DownloadVisualize
BU of 7zo8 by Molmil
cryo-EM structure of CGT ABC transporter in nanodisc apo state
Descriptor: Beta-(1-->2)glucan export ATP-binding/permease protein NdvA, DIUNDECYL PHOSPHATIDYL CHOLINE
Authors:Jaroslaw, S, Dong, C.N, Frank, L, Na, W, Renato, Z, Seunho, J, Henning, S, Christoph, D.
Deposit date:2022-04-24
Release date:2022-12-07
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Mechanism of cyclic beta-glucan export by ABC transporter Cgt of Brucella.
Nat.Struct.Mol.Biol., 29, 2022
7ZO9
DownloadVisualize
BU of 7zo9 by Molmil
cryo-EM structure of CGT ABC transporter in vanadate trapped state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Beta-(1-->2)glucan export ATP-binding/permease protein NdvA, VANADATE ION
Authors:Jaroslaw, S, Dong, C.N, Frank, L, Na, W, Renato, Z, Seunho, J, Henning, S, Christoph, D.
Deposit date:2022-04-24
Release date:2022-12-07
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Mechanism of cyclic beta-glucan export by ABC transporter Cgt of Brucella.
Nat.Struct.Mol.Biol., 29, 2022
5N4C
DownloadVisualize
BU of 5n4c by Molmil
Prolyl oligopeptidase B from Galerina marginata bound to 35mer hydrolysis and macrocyclization substrate - S577A mutant
Descriptor: Alpha-amanitin proprotein, GLYCEROL, Prolyl oligopeptidase
Authors:Czekster, C.M, McMahon, S.A, Ludewig, H, Naismith, J.H.
Deposit date:2017-02-10
Release date:2017-11-01
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Characterization of a dual function macrocyclase enables design and use of efficient macrocyclization substrates.
Nat Commun, 8, 2017
7ZNU
DownloadVisualize
BU of 7znu by Molmil
cryo-EM structure of CGT ABC transporter in detergent micelle
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Beta-(1-->2)glucan export ATP-binding/permease protein NdvA, VANADATE ION
Authors:Jaroslaw, S, Dong, C.N, Frank, L, Na, W, Renato, Z, Seunho, J, Henning, S, Christoph, D.
Deposit date:2022-04-22
Release date:2022-12-07
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Mechanism of cyclic beta-glucan export by ABC transporter Cgt of Brucella.
Nat.Struct.Mol.Biol., 29, 2022
8I4Z
DownloadVisualize
BU of 8i4z by Molmil
CalA3 with hydrolysis product
Descriptor: 11-oxidanylidene-11-(1~{H}-pyrrol-2-yl)undecanoic acid, Beta-ketoacyl-acyl-carrier-protein synthase I
Authors:Wang, J, Wang, Z.
Deposit date:2023-01-21
Release date:2023-02-22
Last modified:2024-07-03
Method:ELECTRON MICROSCOPY (3.97 Å)
Cite:C-N bond formation by a polyketide synthase.
Nat Commun, 14, 2023
7UGA
DownloadVisualize
BU of 7uga by Molmil
Solution structure of NPSL2
Descriptor: NPSL2 RNA (43-MER)
Authors:Liu, Y, Keane, S.C.
Deposit date:2022-03-24
Release date:2022-04-13
Last modified:2024-05-15
Method:SOLUTION NMR, SOLUTION SCATTERING
Cite:Solution Structure of NPSL2, A Regulatory Element in the oncomiR-1 RNA.
J.Mol.Biol., 434, 2022
8R9T
DownloadVisualize
BU of 8r9t by Molmil
Crystal structure of the C-terminal domain of Chlamydomonas reinhardtii CFAP410
Descriptor: CALCIUM ION, Flagellar associated protein
Authors:Stadler, A, Dong, G.
Deposit date:2023-11-30
Release date:2024-09-25
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The C-terminus of CFAP410 forms a tetrameric helical bundle that is essential for its localization to the basal body.
Open Biology, 14, 2024
6SO9
DownloadVisualize
BU of 6so9 by Molmil
Mouse RBM20 RRM domain in complex with AUCUUA RNA
Descriptor: AUCUUA, RNA-binding protein 20
Authors:Mackereth, C.D, Upadhyay, S.K.
Deposit date:2019-08-29
Release date:2019-11-06
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural basis of UCUU RNA motif recognition by splicing factor RBM20.
Nucleic Acids Res., 48, 2020
6SIH
DownloadVisualize
BU of 6sih by Molmil
Structure of bacterial flagellar capping protein FliD
Descriptor: Flagellar hook-associated protein 2
Authors:Al-Otaibi, N.S, Farrell, D, DiMaio, F, Bergeron, J.R.C.
Deposit date:2019-08-09
Release date:2020-05-27
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (4.7 Å)
Cite:The cryo-EM structure of the bacterial flagellum cap complex suggests a molecular mechanism for filament elongation.
Nat Commun, 11, 2020
7N0B
DownloadVisualize
BU of 7n0b by Molmil
Cryo-EM structure of SARS-CoV-2 nsp10-nsp14 (WT)-RNA complex
Descriptor: CALCIUM ION, Non-structural protein 10, Proofreading exoribonuclease, ...
Authors:Liu, C, Yang, Y.
Deposit date:2021-05-25
Release date:2021-07-28
Last modified:2025-05-28
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structural basis of mismatch recognition by a SARS-CoV-2 proofreading enzyme.
Science, 373, 2021
6H0K
DownloadVisualize
BU of 6h0k by Molmil
Hen egg-white lysozyme structure determined with data from the EuXFEL, the first MHz free electron laser, 7.47 keV photon energy
Descriptor: Lysozyme C
Authors:Gruenbein, M.L, Gorel, A, Stricker, M, Bean, R, Bielecki, J, Doerner, K, Hartmann, E, Hilpert, M, Kloos, M, Letrun, R, Sztuk-Dambietz, J, Mancuso, A, Meserschmidt, M, Nass-Kovacs, G, Ramilli, M, Roome, C.M, Sato, T, Doak, R.B, Shoeman, R.L, Foucar, L, Colletier, J.P, Barends, T.R.M, Stan, C, Schlichting, I.
Deposit date:2018-07-10
Release date:2018-09-05
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Megahertz data collection from protein microcrystals at an X-ray free-electron laser.
Nat Commun, 9, 2018
8OKM
DownloadVisualize
BU of 8okm by Molmil
Crystal structure of F2F-2020197-00X bound to the main protease (3CLpro/Mpro) of SARS-CoV-2.
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 1,2-ETHANEDIOL, 3C-like proteinase nsp5, ...
Authors:Costanzi, E, Demitri, N, Storici, P.
Deposit date:2023-03-28
Release date:2023-05-03
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Broad-spectrum coronavirus 3C-like protease peptidomimetic inhibitors effectively block SARS-CoV-2 replication in cells: Design, synthesis, biological evaluation, and X-ray structure determination.
Eur.J.Med.Chem., 253, 2023
6H0L
DownloadVisualize
BU of 6h0l by Molmil
Hen egg-white lysozyme structure determined with data from the EuXFEL, 9.22 keV photon energy
Descriptor: Lysozyme C
Authors:Gruenbein, M.L, Gorel, A, Stricker, M, Bean, R, Bielecki, J, Doerner, K, Hartmann, E, Hilpert, M, Kloos, M, Letrun, R, Sztuk-Dambietz, J, Mancuso, A, Meserschmidt, M, Nass-Kovacs, G, Ramilli, M, Roome, C.M, Sato, T, Doak, R.B, Shoeman, R.L, Foucar, L, Colletier, J.P, Barends, T.R.M, Stan, C, Schlichting, I.
Deposit date:2018-07-10
Release date:2018-09-05
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Megahertz data collection from protein microcrystals at an X-ray free-electron laser.
Nat Commun, 9, 2018
6OHW
DownloadVisualize
BU of 6ohw by Molmil
Structural basis for human coronavirus attachment to sialic acid receptors. Apo-HCoV-OC43 S
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike surface glycoprotein, ...
Authors:Tortorici, M.A, Walls, A.C, Lang, Y, Wang, C, Li, Z, Koerhuis, D, Boons, G.J, Bosch, B.J, Rey, F.A, de Groot, R, Veesler, D.
Deposit date:2019-04-07
Release date:2019-06-05
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural basis for human coronavirus attachment to sialic acid receptors.
Nat.Struct.Mol.Biol., 26, 2019
4RDZ
DownloadVisualize
BU of 4rdz by Molmil
Crystal structure of VmoLac in P64 space group
Descriptor: COBALT (II) ION, GLYCEROL, MYRISTIC ACID, ...
Authors:Hiblot, J, Bzdrenga, J, Champion, C, Gotthard, G, Gonzalez, D, Chabriere, E, Elias, M.
Deposit date:2014-09-20
Release date:2015-02-25
Last modified:2025-03-26
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of VmoLac, a tentative quorum quenching lactonase from the extremophilic crenarchaeon Vulcanisaeta moutnovskia.
Sci Rep, 5, 2015
8TGX
DownloadVisualize
BU of 8tgx by Molmil
Crystal structure of C. elegans LGG-1
Descriptor: CHLORIDE ION, Protein lgg-1
Authors:Cheung, Y.W.S, Yip, C.K.
Deposit date:2023-07-13
Release date:2025-01-22
Last modified:2025-05-28
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:Structure of the human autophagy factor EPG5 and the molecular basis of its conserved mode of interaction with Atg8-family proteins.
Autophagy, 21, 2025
1UNL
DownloadVisualize
BU of 1unl by Molmil
Structural mechanism for the inhibition of CD5-p25 from the roscovitine, aloisine and indirubin.
Descriptor: CYCLIN-DEPENDENT KINASE 5, CYCLIN-DEPENDENT KINASE 5 ACTIVATOR 1, R-ROSCOVITINE
Authors:Mapelli, M, Crovace, C, Massimiliano, L, Musacchio, A.
Deposit date:2003-09-10
Release date:2004-11-10
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Mechanism of Cdk5/P25 Binding by Cdk Inhibitors
J.Med.Chem., 48, 2005
1URO
DownloadVisualize
BU of 1uro by Molmil
UROPORPHYRINOGEN DECARBOXYLASE
Descriptor: BETA-MERCAPTOETHANOL, PROTEIN (UROPORPHYRINOGEN DECARBOXYLASE)
Authors:Whitby, F.G, Phillips, J.D, Kushner, J.P, Hill, C.P.
Deposit date:1998-08-21
Release date:1998-08-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of human uroporphyrinogen decarboxylase.
EMBO J., 17, 1998
8K8M
DownloadVisualize
BU of 8k8m by Molmil
Crystallographic structure of Lysozyme C from chicken
Descriptor: GLYCEROL, Lysozyme C
Authors:Zheng, P, Shang, G, Jin, J, He, L.
Deposit date:2023-07-31
Release date:2024-08-07
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystallographic structure of Lysozyme C from chicken
To Be Published
8ZRH
DownloadVisualize
BU of 8zrh by Molmil
HBcAg-D4 Fab complex
Descriptor: Capsid protein, Heavy chains of D4 Fab, Light chains of D4 Fab
Authors:Zhang, Z, Ju, B, Liu, C, Yan, H.
Deposit date:2024-06-04
Release date:2024-11-13
Last modified:2025-02-19
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:The characterization and structural basis of a human broadly binding antibody to HBV core protein.
J.Virol., 99, 2025
6O47
DownloadVisualize
BU of 6o47 by Molmil
human cGAS core domain (K427E/K428E) bound with RU-521
Descriptor: (3~{S})-3-[1-[4,5-bis(chloranyl)-1~{H}-benzimidazol-2-yl]-3-methyl-5-oxidanyl-pyrazol-4-yl]-3~{H}-2-benzofuran-1-one, 2-(4,5-dichloro-1H-benzimidazol-2-yl)-5-methyl-4-[(1R)-3-oxo-1,3-dihydro-2-benzofuran-1-yl]-1,2-dihydro-3H-pyrazol-3-one, CITRIC ACID, ...
Authors:Xie, W, Lama, L, Adura, C, Glickman, J.F, Tuschl, T, Patel, D.J.
Deposit date:2019-02-28
Release date:2019-05-29
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.196 Å)
Cite:Human cGAS catalytic domain has an additional DNA-binding interface that enhances enzymatic activity and liquid-phase condensation.
Proc.Natl.Acad.Sci.USA, 116, 2019

238582

數據於2025-07-09公開中

PDB statisticsPDBj update infoContact PDBjnumon