PDB: 2262 resultsInfo pagesStatus searchChemie searchBIRD

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6VAL	Cryo-EM structure of an undecameric chicken CALHM1 and human CALHM2 chimera Descriptor: Green fluorescent protein, CALHM1,CALMH2 chimera Authors: Syrjanen, J.L, Chou, T.H, Furukawa, H. Deposit date: 2019-12-17 Release date: 2020-01-29 Last modified: 2024-10-23 Method: ELECTRON MICROSCOPY (3.87 Å) Cite: Structure and assembly of calcium homeostasis modulator proteins. Nat.Struct.Mol.Biol., 27, 2020
9F33	Cryo-EM structure of Dopamine 3 Receptor:Go complex bound to bitopic FOB02-04A - Conformation A Descriptor: Antibody scFv16, Green fluorescent protein,D(3) dopamine receptor, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ... Authors: Arroyo-Urea, S, Garcia-Nafria, J. Deposit date: 2024-04-24 Release date: 2024-09-18 Last modified: 2025-07-02 Method: ELECTRON MICROSCOPY (3.05 Å) Cite: A bitopic agonist bound to the dopamine 3 receptor reveals a selectivity site. Nat Commun, 15, 2024
4NDJ	Crystal Structure of a computational designed engrailed homeodomain variant fused with YFP Descriptor: Green fluorescent protein, chimeric construct,GFP-like fluorescent chromoprotein FP506, related Authors: Mou, Y, Mayo, S.L. Deposit date: 2013-10-26 Release date: 2014-11-05 Last modified: 2024-10-16 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Using Molecular Dynamics Simulations as an Aid in the Prediction of Domain Swapping of Computationally Designed Protein Variants. J.Mol.Biol., 427, 2015
4NDK	Crystal structure of a computational designed engrailed homeodomain variant fused with YFP Descriptor: E23P-YFP, GFP-like fluorescent chromoprotein FP506, related, ... Authors: Mou, Y, Mayo, S.L. Deposit date: 2013-10-26 Release date: 2014-11-05 Last modified: 2024-10-09 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Using Molecular Dynamics Simulations as an Aid in the Prediction of Domain Swapping of Computationally Designed Protein Variants. J.Mol.Biol., 427, 2015
8WG4	mouse TMEM63b in DDM-CHS micelle with YN9303-24 Fab Descriptor: 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine, CHOLESTEROL HEMISUCCINATE, CSC1-like protein 2,Green fluorescent protein Authors: Miyata, Y, Takahashi, K, Lee, Y, Sultan, C.S, Kuribayashi, R, Takahashi, M, Hata, K, Bamba, T, Izumi, Y, Liu, K, Uemura, T, Nomura, N, Iwata, S, Nagata, S, Nishizawa, T, Segawa, K. Deposit date: 2023-09-20 Release date: 2024-09-25 Method: ELECTRON MICROSCOPY (3.5 Å) Cite: Mechanosensitive channel TMEM63B functions as a plasma membrane lipid scramblase To Be Published
8WG3	mouse TMEM63b in LMNG-CHS micelle Descriptor: 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine, CHOLESTEROL HEMISUCCINATE, CSC1-like protein 2,Green fluorescent protein Authors: Miyata, Y, Takahashi, K, Lee, Y, Sultan, C.S, Kuribayashi, R, Takahashi, M, Hata, K, Bamba, T, Izumi, Y, Liu, K, Uemura, T, Nomura, N, Iwata, S, Nagata, S, Nishizawa, T, Segawa, K. Deposit date: 2023-09-20 Release date: 2024-09-25 Method: ELECTRON MICROSCOPY (3.4 Å) Cite: Mechanosensitive channel TMEM63B functions as a plasma membrane lipid scramblase To Be Published
8X9P	HURP (428-534)-alpha-tubulin-beta-tubulin complex Descriptor: Disks large-associated protein 5,Green fluorescent protein, Tubulin alpha chain, Tubulin beta chain Authors: Chen, P.-P, Hsia, K.-C. Deposit date: 2023-11-30 Release date: 2024-10-23 Last modified: 2025-07-02 Method: ELECTRON MICROSCOPY (3.54 Å) Cite: HURP binding to the vinca domain of beta-tubulin accounts for cancer drug resistance. Nat Commun, 15, 2024
8HTT	Cryo-EM structure of human TMEM87A, gluconate-bound Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, D-gluconic acid, Transmembrane protein 87A,EGFP, ... Authors: Han, A, Kim, H.M. Deposit date: 2022-12-21 Release date: 2023-12-27 Last modified: 2024-11-06 Method: ELECTRON MICROSCOPY (3.6 Å) Cite: GolpHCat (TMEM87A), a unique voltage-dependent cation channel in Golgi apparatus, contributes to Golgi-pH maintenance and hippocampus-dependent memory. Nat Commun, 15, 2024
5MFC	Designed armadillo repeat protein YIIIM5AII in complex with (KR)4-GFP Descriptor: (KR)4-Green fluorescent protein,Green fluorescent protein, ACETATE ION, YIIIM5AII Authors: Hansen, S, Kiefer, J, Madhurantakam, C, Mittl, P, Plueckthun, A. Deposit date: 2016-11-18 Release date: 2017-07-19 Last modified: 2024-11-06 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Structures of designed armadillo repeat proteins binding to peptides fused to globular domains. Protein Sci., 26, 2017
7UGR	Crystal structure of hyperfolder YFP Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Hyperfolder yellow fluorescent protein, ... Authors: Campbell, B.C, Liu, C.F, Petsko, G.A. Deposit date: 2022-03-25 Release date: 2022-10-26 Last modified: 2024-10-16 Method: X-RAY DIFFRACTION (1.74 Å) Cite: Chemically stable fluorescent proteins for advanced microscopy. Nat.Methods, 19, 2022
7UGT	Crystal structure of hyperfolder fluorescent protein FOLD6 Descriptor: FOLD6 Authors: Campbell, B.C, Liu, C.F, Petsko, G.A. Deposit date: 2022-03-25 Release date: 2022-10-26 Last modified: 2024-11-06 Method: X-RAY DIFFRACTION (1.21 Å) Cite: Chemically stable fluorescent proteins for advanced microscopy. Nat.Methods, 19, 2022
3EKJ	Calcium-free GCaMP2 (calcium binding deficient mutant) Descriptor: Myosin light chain kinase, Green fluorescent protein, Calmodulin chimera Authors: Akerboom, J, Velez Rivera, J.D, Looger, L.L, Schreiter, E.R. Deposit date: 2008-09-19 Release date: 2008-12-16 Last modified: 2024-11-13 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Crystal Structures of the GCaMP Calcium Sensor Reveal the Mechanism of Fluorescence Signal Change and Aid Rational Design J.Biol.Chem., 284, 2009
9FBU	X-ray structure of the iGluSnFR3 in complex with L-glutamate Descriptor: GLUTAMIC ACID, Periplasmic binding transport protein,Green fluorescent protein Authors: Tarnawski, M, Hiblot, J, Leippe, P. Deposit date: 2024-05-14 Release date: 2025-04-02 Method: X-RAY DIFFRACTION (1.7 Å) Cite: X-ray structure of the iGluSnFR3 in complex with L-glutamate To Be Published
8Y8V	Cryo-EM structure of AQP7 in POPC nanodisc Descriptor: Green fluorescent protein,Aquaporin-7, O-[(R)-{[(2R)-2,3-bis(octadecanoyloxy)propyl]oxy}(hydroxy)phosphoryl]-L-serine Authors: Kozai, D, Suzuki, S, Kamegawa, A, Nishikawa, K, Suzuki, H, Fujiyosh, Y. Deposit date: 2024-02-06 Release date: 2025-03-19 Last modified: 2025-06-25 Method: ELECTRON MICROSCOPY (2.49 Å) Cite: Narrowed pore conformations of aquaglyceroporins AQP3 and GlpF. Nat Commun, 16, 2025
9GE3	Structure of GPR55 in complex with G13 and endogenous lipid agonist lysophosphatidylinositol Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Green fluorescent protein,G-protein coupled receptor 55, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ... Authors: Claff, T, Ebenhoch, R, Weichert, D. Deposit date: 2024-08-06 Release date: 2025-03-05 Last modified: 2025-07-02 Method: ELECTRON MICROSCOPY (2.87 Å) Cite: Structural basis for lipid-mediated activation of G protein-coupled receptor GPR55. Nat Commun, 16, 2025
9GE2	Structure of GPR55 in complex with G13 and synthetic agonist ML184 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 3-[4-(2,3-dimethylphenyl)piperazin-1-yl]carbonyl-N,N-dimethyl-4-pyrrolidin-1-yl-benzenesulfonamide, CHOLESTEROL, ... Authors: Claff, T, Ebenhoch, R, Weichert, D. Deposit date: 2024-08-06 Release date: 2025-03-05 Last modified: 2025-07-09 Method: ELECTRON MICROSCOPY (2.51 Å) Cite: Structural basis for lipid-mediated activation of G protein-coupled receptor GPR55. Nat Commun, 16, 2025
6QUG	GHK tagged MBP-Nup98(1-29) Descriptor: COPPER (II) ION, Maltodextrin-binding protein,Nucleoporin, putative, ... Authors: Huyton, T, Gorlich, D. Deposit date: 2019-02-27 Release date: 2020-05-27 Last modified: 2024-05-15 Method: X-RAY DIFFRACTION (2.7 Å) Cite: The copper(II)-binding tripeptide GHK, a valuable crystallization and phasing tag for macromolecular crystallography. Acta Crystallogr D Struct Biol, 76, 2020
7PHR	Structure of a fully assembled T-cell receptor engaging a tumor-associated peptide-MHC I Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-2-microglobulin, HLA class I histocompatibility antigen, ... Authors: Susac, L, Thomas, C, Tampe, R. Deposit date: 2021-08-18 Release date: 2022-08-31 Last modified: 2025-07-02 Method: ELECTRON MICROSCOPY (3.08 Å) Cite: Structure of a fully assembled tumor-specific T cell receptor ligated by pMHC. Cell, 185, 2022
4JEO	Crystal structure of red fluorescent protein lanRFPdam exposed to prolonged X-ray irradiation Descriptor: GLYCEROL, Red fluorescent protein blFP-R5 Authors: Pletnev, V.Z, Pletneva, N.V, Pletnev, S.V. Deposit date: 2013-02-27 Release date: 2013-09-18 Last modified: 2024-11-06 Method: X-RAY DIFFRACTION (2.35 Å) Cite: Structure of the red fluorescent protein from a lancelet (Branchiostoma lanceolatum): a novel GYG chromophore covalently bound to a nearby tyrosine. Acta Crystallogr.,Sect.D, 69, 2013
4JGE	Crystal structure of red fluorescent gene-engineered variant with improved folding - lanRFP_delS83 (Branchiostoma lanceolatum) Descriptor: GLYCEROL, Red fluorescent protein blFP-R5 Authors: Pletnev, V.Z, Pletneva, N.V, Pletnev, S.V. Deposit date: 2013-03-01 Release date: 2013-09-18 Last modified: 2024-11-20 Method: X-RAY DIFFRACTION (1.94 Å) Cite: Structure of the red fluorescent protein from a lancelet (Branchiostoma lanceolatum): a novel GYG chromophore covalently bound to a nearby tyrosine. Acta Crystallogr.,Sect.D, 69, 2013
4JF9	Crystal structure of the wild type red fluorescent protein lanRFP (Branchiostoma Lanceolatum) Descriptor: Red fluorescent protein blFP-R5 Authors: Pletnev, V.Z, Pletneva, N.V, Pletnev, S.V. Deposit date: 2013-02-28 Release date: 2013-09-18 Last modified: 2024-10-16 Method: X-RAY DIFFRACTION (2.33 Å) Cite: Structure of the red fluorescent protein from a lancelet (Branchiostoma lanceolatum): a novel GYG chromophore covalently bound to a nearby tyrosine. Acta Crystallogr.,Sect.D, 69, 2013
1ZGP	Crystal Structure of the Discosoma Red Fluorescent Protein (DsRed) Variant K70M Descriptor: Red fluorescent protein drFP583 Authors: Tubbs, J.L, Tainer, J.A, Getzoff, E.D. Deposit date: 2005-04-21 Release date: 2005-08-02 Last modified: 2024-11-13 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Crystallographic structures of discosoma red fluorescent protein with immature and mature chromophores: linking Peptide bond trans-cis isomerization and acylimine formation in chromophore maturation. Biochemistry, 44, 2005
1ZGO	High Resolution Crystal Structure of the Discosoma Red Fluorescent Protein (DsRed) Descriptor: Red fluorescent protein drFP583 Authors: Tubbs, J.L, Tainer, J.A, Getzoff, E.D. Deposit date: 2005-04-21 Release date: 2005-08-02 Last modified: 2024-10-30 Method: X-RAY DIFFRACTION (1.4 Å) Cite: Crystallographic structures of discosoma red fluorescent protein with immature and mature chromophores: linking Peptide bond trans-cis isomerization and acylimine formation in chromophore maturation. Biochemistry, 44, 2005
1ZGQ	Crystal Structure of the Discosoma Red Fluorescent Protein (DsRed) Variant Q66M Descriptor: DI(HYDROXYETHYL)ETHER, Red fluorescent protein drFP583 Authors: Tubbs, J.L, Tainer, J.A, Getzoff, E.D. Deposit date: 2005-04-21 Release date: 2005-08-02 Last modified: 2025-03-26 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Crystallographic structures of discosoma red fluorescent protein with immature and mature chromophores: linking Peptide bond trans-cis isomerization and acylimine formation in chromophore maturation. Biochemistry, 44, 2005
7BYM	Cryo-EM structure of human KCNQ4 with retigabine Descriptor: Calmodulin-3, Green fluorescent protein,Potassium voltage-gated channel subfamily KQT member 4, POTASSIUM ION, ... Authors: Shen, H, Li, T, Yue, Z. Deposit date: 2020-04-23 Release date: 2020-12-02 Last modified: 2025-07-02 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Structural Basis for the Modulation of Human KCNQ4 by Small-Molecule Drugs. Mol.Cell, 81, 2021

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