PDB: 11109 resultsInfo pagesStatus searchChemie searchBIRD

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5F4V	Crystal structure of the human sperm Izumo1 residues 22-268 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Izumo sperm-egg fusion protein 1 Authors: Aydin, H, Sultana, A, Lee, J.E. Deposit date: 2015-12-03 Release date: 2016-06-15 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (2.9 Å) Cite: Molecular architecture of the human sperm IZUMO1 and egg JUNO fertilization complex. Nature, 534, 2016
5F5J	E.coli GlpG Y205F mutant complexed with aldehyde inhibitor in DMPC/CHAPSO bicelle Descriptor: Rhomboid protease GlpG, peptidic derivative of Gurken: ACE-VAL-ARG-MET-ALA-aldehyde Authors: Urban, S, Cho, S, Dickey, S. Deposit date: 2015-12-04 Release date: 2016-02-10 Last modified: 2024-07-10 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Crystal Structures and Inhibition Kinetics Reveal a Two-Stage Catalytic Mechanism with Drug Design Implications for Rhomboid Proteolysis. Mol.Cell, 61, 2016
5F09	Structure of inactive GCPII mutant in complex with beta-citryl glutamate Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ... Authors: Tykvart, J, Navratil, M, Pachl, P, Konvalinka, J. Deposit date: 2015-11-27 Release date: 2016-06-01 Last modified: 2024-10-16 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Comparison of human glutamate carboxypeptidases II and III reveals their divergent substrate specificities. Febs J., 283, 2016
5Y3M	Crystal structure of bovine TLR9 in complex with two DNAs (CpG DNA and TCGTTT DNA) Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, DNA (5'-D(*TP*CP*GP*T)-3'), DNA (5'-D(P*GP*GP*CP*GP*TP*T)-3'), ... Authors: Ohto, U, Shimizu, T. Deposit date: 2017-07-29 Release date: 2018-04-18 Last modified: 2024-10-16 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Toll-like Receptor 9 Contains Two DNA Binding Sites that Function Cooperatively to Promote Receptor Dimerization and Activation Immunity, 48, 2018
5F4Q	Crystal structure of the human egg surface protein Juno Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, GLYCEROL, ... Authors: Aydin, H, Sultana, A, Lee, J.E. Deposit date: 2015-12-03 Release date: 2016-06-15 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (1.8 Å) Cite: Molecular architecture of the human sperm IZUMO1 and egg JUNO fertilization complex. Nature, 534, 2016
5F4T	Crystal structure of the human sperm Izumo1 residues 22-254 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Izumo sperm-egg fusion protein 1 Authors: Aydin, H, Sultana, A, Lee, J.E. Deposit date: 2015-12-03 Release date: 2016-06-15 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (3.083 Å) Cite: Molecular architecture of the human sperm IZUMO1 and egg JUNO fertilization complex. Nature, 534, 2016
4XSS	Insulin-like growth factor I in complex with site 1 of a hybrid insulin receptor / Type 1 insulin-like growth factor receptor Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Insulin receptor, ... Authors: Lawrence, C, Kong, G.K.-W, Menting, J.G, Lawrence, M.C. Deposit date: 2015-01-22 Release date: 2015-06-10 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (3 Å) Cite: Structural Congruency of Ligand Binding to the Insulin and Insulin/Type 1 Insulin-like Growth Factor Hybrid Receptors. Structure, 23, 2015
5FG8	Drosophila CaMKII-wt in complex with a fragment of the Eag potassium channel and Mg2+/ADP Descriptor: ADENOSINE-5'-DIPHOSPHATE, Calcium/calmodulin-dependent protein kinase type II alpha chain, GLYCEROL, ... Authors: Castro-Rodrigues, A.F, Morais-Cabral, J.H. Deposit date: 2015-12-20 Release date: 2016-12-28 Last modified: 2024-05-08 Method: X-RAY DIFFRACTION (1.955 Å) Cite: The Interaction between the Drosophila EAG Potassium Channel and the Protein Kinase CaMKII Involves an Extensive Interface at the Active Site of the Kinase. J.Mol.Biol., 430, 2018
5F84	Crystal structure of Drosophila Poglut1 (Rumi) complexed with its glycoprotein product (glucosylated EGF repeat) and UDP Descriptor: Coagulation factor IX, O-glucosyltransferase rumi, SULFATE ION, ... Authors: Yu, H.J, Li, H.L. Deposit date: 2015-12-09 Release date: 2016-07-20 Last modified: 2020-07-29 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Structural analysis of Notch-regulating Rumi reveals basis for pathogenic mutations. Nat. Chem. Biol., 12, 2016
3FEC	Crystal structure of human Glutamate Carboxypeptidase III (GCPIII/NAALADase II), pseudo-unliganded Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 3[N-MORPHOLINO]PROPANE SULFONIC ACID, ... Authors: Barinka, C, Lubkowski, J, Hlouchova, K. Deposit date: 2008-11-28 Release date: 2009-08-25 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (1.49 Å) Cite: Structural insight into the evolutionary and pharmacologic homology of glutamate carboxypeptidases II and III Febs J., 276, 2009
3FF3	The high resolution structure of human glutamate carboxypeptidase III (GCPIII/NAALADase II) in complex with L-glutamate Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ... Authors: Lubkowski, J, Barinka, C. Deposit date: 2008-12-01 Release date: 2009-08-25 Last modified: 2024-10-16 Method: X-RAY DIFFRACTION (1.37 Å) Cite: Structural insight into the evolutionary and pharmacologic homology of glutamate carboxypeptidases II and III Febs J., 276, 2009
5VND	Crystal structure of FGFR1-Y563C (FGFR4 surrogate) covalently bound to H3B-6527 Descriptor: 1,2-ETHANEDIOL, Fibroblast growth factor receptor 1, N-{2-[(6-{[(2,6-dichloro-3,5-dimethoxyphenyl)carbamoyl](methyl)amino}pyrimidin-4-yl)amino]-5-(4-ethylpiperazin-1-yl)phenyl}propanamide, ... Authors: Tsai, J.H.C, Reynolds, D, Fekkes, P, Smith, P, Larsen, N.A. Deposit date: 2017-04-30 Release date: 2017-05-24 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (2.2 Å) Cite: H3B-6527 Is a Potent and Selective Inhibitor of FGFR4 in FGF19-Driven Hepatocellular Carcinoma. Cancer Res., 77, 2017
5WCU	Crystal structure of 167 bp nucleosome bound to the globular domain of linker histone H5 Descriptor: DNA (167-MER), Histone H2A, Histone H2B, ... Authors: Jiang, J.S, Zhou, B.R. Deposit date: 2017-07-02 Release date: 2018-10-31 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (5.53 Å) Cite: Revisit of Reconstituted 30-nm Nucleosome Arrays Reveals an Ensemble of Dynamic Structures. J. Mol. Biol., 430, 2018
2OUJ	The crystal structure of the Thrombospondin-1 N-terminal domain in complex with fractionated Heparin DP8 Descriptor: Thrombospondin-1 Authors: Tan, K, Joachimiak, A, Wang, J, Lawler, J. Deposit date: 2007-02-11 Release date: 2008-01-08 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Heparin-induced cis- and trans-Dimerization Modes of the Thrombospondin-1 N-terminal Domain. J.Biol.Chem., 283, 2008
5Y3L	Crystal structure of horse TLR9 in complex with two DNAs (CpG DNA and CCGCAC DNA) Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, DNA (5'-D(*AP*GP*GP*CP*GP*TP*TP*TP*TP*T)-3'), ... Authors: Ohto, U, Shimizu, T. Deposit date: 2017-07-29 Release date: 2018-04-18 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Toll-like Receptor 9 Contains Two DNA Binding Sites that Function Cooperatively to Promote Receptor Dimerization and Activation Immunity, 48, 2018
4GRS	Crystal structure of a chimeric DAH7PS Descriptor: Phospho-2-dehydro-3-deoxyheptonate aldolase, 2-dehydro-3-deoxyphosphoheptonate aldolase, TYROSINE Authors: Cross, P.J, Allison, T.M, Dobson, R.C.J, Jameson, G.B, Parker, E.J. Deposit date: 2012-08-26 Release date: 2013-02-06 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (3 Å) Cite: Engineering allosteric control to an unregulated enzyme by transfer of a regulatory domain Proc.Natl.Acad.Sci.USA, 110, 2013
4DBP	Myosin VI nucleotide-free (MDINSERT2) D179Y crystal structure Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Calmodulin, ... Authors: Pylypenko, O, Sweeney, H.L, Houdusse, A. Deposit date: 2012-01-16 Release date: 2013-01-30 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Mutations in myosin VI that cause a loss of coordination between heads provide insights into the structural changes underlying force generation and the importance of gating To be Published
2OVO	THE CRYSTAL AND MOLECULAR STRUCTURE OF THE THIRD DOMAIN OF SILVER PHEASANT OVOMUCOID (OMSVP3) Descriptor: OVOMUCOID THIRD DOMAIN Authors: Bode, W, Epp, O. Deposit date: 1985-06-11 Release date: 1985-11-08 Last modified: 2023-07-26 Method: X-RAY DIFFRACTION (1.5 Å) Cite: The crystal and molecular structure of the third domain of silver pheasant ovomucoid (OMSVP3). Eur.J.Biochem., 147, 1985
4YVI	Crystal Structure of H. influenzae TrmD in complex with sinefungin and tRNA Descriptor: SINEFUNGIN, tRNA, tRNA (guanine-N(1)-)-methyltransferase Authors: Yoshida, K, Ito, T, Yokoyama, S. Deposit date: 2015-03-20 Release date: 2015-07-15 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (3.01 Å) Cite: Structural basis for methyl-donor-dependent and sequence-specific binding to tRNA substrates by knotted methyltransferase TrmD. Proc.Natl.Acad.Sci.USA, 112, 2015
3DMK	Crystal structure of Down Syndrome Cell Adhesion Molecule (DSCAM) isoform 1.30.30, N-terminal eight Ig domains Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Down Syndrome Cell Adhesion Molecule (DSCAM) isoform 1.30.30, ... Authors: Sawaya, M.R, Wojtowicz, W.M, Eisenberg, D, Zipursky, S.L. Deposit date: 2008-07-01 Release date: 2008-10-07 Last modified: 2023-08-30 Method: X-RAY DIFFRACTION (4.19 Å) Cite: A double S shape provides the structural basis for the extraordinary binding specificity of Dscam isoforms. Cell(Cambridge,Mass.), 134, 2008
5WLE	Crystal structure of the PPS PHD finger in complex with H3K4me3 Descriptor: H3K4me3 Peptide, Protein partner of snf, isoform A, ... Authors: Klein, B.J, Kutateladze, T.G. Deposit date: 2017-07-26 Release date: 2017-10-04 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (1.952 Å) Cite: A Unique pH-Dependent Recognition of Methylated Histone H3K4 by PPS and DIDO. Structure, 25, 2017
5WLF	Crystal structure of the apo PPS PHD finger Descriptor: GLYCEROL, Protein partner of snf, isoform A, ... Authors: Klein, B.J, Kutateladze, T.G. Deposit date: 2017-07-26 Release date: 2017-10-04 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (1.4 Å) Cite: A Unique pH-Dependent Recognition of Methylated Histone H3K4 by PPS and DIDO. Structure, 25, 2017
5X2M	Crystal structure of the medaka fish taste receptor T1r2a-T1r3 ligand binding domains in complex with L-glutamine Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, CHLORIDE ION, ... Authors: Nuemket, N, Yasui, N, Atsumi, N, Yamashita, A. Deposit date: 2017-02-02 Release date: 2017-05-24 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (2.206 Å) Cite: Structural basis for perception of diverse chemical substances by T1r taste receptors Nat Commun, 8, 2017
5WN9	Structure of antibody 2D10 bound to the central conserved region of RSV G Descriptor: Major surface glycoprotein G, scFv 2D10 Authors: Fedechkin, S.O, George, N.L, Wolff, J.T, Kauvar, L.M, DuBois, R.M. Deposit date: 2017-07-31 Release date: 2018-03-14 Last modified: 2024-10-09 Method: X-RAY DIFFRACTION (1.551 Å) Cite: Structures of respiratory syncytial virus G antigen bound to broadly neutralizing antibodies. Sci Immunol, 3, 2018
4FTB	Crystal structure of the authentic Flock House virus particle Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, CHLORIDE ION, ... Authors: Speir, J.A, Chen, Z, Reddy, V.S, Johnson, J.E. Deposit date: 2012-06-27 Release date: 2012-08-01 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Structural study of virus assembly intermediates reveals maturation event sequence and a staging position for externalized lytic peptides to be published, 2012

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