Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4ROE
DownloadVisualize
BU of 4roe by Molmil
Human TFIIB-related factor 2 (Brf2) and TBP bound to RPPH1 promoter
Descriptor: MAGNESIUM ION, Non-template strand, TATA-box-binding protein, ...
Authors:Vannini, A, Gouge, J, Satia, K, Guthertz, N.
Deposit date:2014-10-28
Release date:2015-12-30
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Redox Signaling by the RNA Polymerase III TFIIB-Related Factor Brf2.
Cell(Cambridge,Mass.), 163, 2015
6HMS
DownloadVisualize
BU of 6hms by Molmil
Cryo-EM map of DNA polymerase D from Pyrococcus abyssi in complex with DNA
Descriptor: DNA (5'-D(*GP*AP*GP*AP*CP*GP*GP*GP*CP*CP*GP*CP*GP*TP*C)-3'), DNA (5'-D(P*TP*GP*AP*CP*GP*CP*GP*GP*CP*CP*CP*GP*TP*CP*TP*C)-3'), DNA polymerase II large subunit,DNA polymerase II large subunit, ...
Authors:Raia, P, Carroni, M, Sauguet, L.
Deposit date:2018-09-12
Release date:2019-01-30
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (7.1 Å)
Cite:Structure of the DP1-DP2 PolD complex bound with DNA and its implications for the evolutionary history of DNA and RNA polymerases.
PLoS Biol., 17, 2019
8FPI
DownloadVisualize
BU of 8fpi by Molmil
Co-structure of the Respiratory Syncytial Virus RNA-dependent RNA polymerase with MRK-1
Descriptor: 4-(2-aminopropan-2-yl)-N'-[4-(cyclopropyloxy)-3-methoxybenzoyl]-6-(4-fluorophenyl)pyridine-2-carbohydrazide, Phosphoprotein, RNA-directed RNA polymerase L
Authors:Fischmann, T.O.
Deposit date:2023-01-04
Release date:2023-06-14
Last modified:2023-07-05
Method:ELECTRON MICROSCOPY (2.39 Å)
Cite:Conserved allosteric inhibitory site on the respiratory syncytial virus and human metapneumovirus RNA-dependent RNA polymerases.
Commun Biol, 6, 2023
6HMF
DownloadVisualize
BU of 6hmf by Molmil
D-family DNA polymerase - DP1 subunit (3'-5' proof-reading exonuclease) H451 proof-reading deficient variant
Descriptor: ACETATE ION, CACODYLATE ION, CALCIUM ION, ...
Authors:Raia, P, Delarue, M, Sauguet, L.
Deposit date:2018-09-12
Release date:2019-01-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of the DP1-DP2 PolD complex bound with DNA and its implications for the evolutionary history of DNA and RNA polymerases.
PLoS Biol., 17, 2019
7NK2
DownloadVisualize
BU of 7nk2 by Molmil
1918 H1N1 Viral influenza polymerase heterotrimer with Nb8202 core
Descriptor: Nanobody8202, Polymerase acidic protein, Polymerase basic protein 2,Immunoglobulin G-binding protein A, ...
Authors:Keown, J.R, Carrique, L, Fodor, E, Grimes, J.M.
Deposit date:2021-02-17
Release date:2021-12-01
Last modified:2022-02-09
Method:ELECTRON MICROSCOPY (4.84 Å)
Cite:Mapping inhibitory sites on the RNA polymerase of the 1918 pandemic influenza virus using nanobodies.
Nat Commun, 13, 2022
7NJ5
DownloadVisualize
BU of 7nj5 by Molmil
1918 H1N1 Viral influenza polymerase heterotrimer with Nb8199 core
Descriptor: Nb8199 Core, Polymerase acidic protein, Polymerase basic protein 2,Immunoglobulin G-binding protein A, ...
Authors:Keown, J.R, Carrique, L, Fodor, E, Grimes, J.M.
Deposit date:2021-02-16
Release date:2021-12-01
Last modified:2022-02-09
Method:ELECTRON MICROSCOPY (4.63 Å)
Cite:Mapping inhibitory sites on the RNA polymerase of the 1918 pandemic influenza virus using nanobodies.
Nat Commun, 13, 2022
7NIS
DownloadVisualize
BU of 7nis by Molmil
1918 H1N1 Viral influenza polymerase heterotrimer with Nb8192 core
Descriptor: Nanobody8192 core, Polymerase acidic protein, Polymerase basic protein 2,Immunoglobulin G-binding protein A, ...
Authors:Keown, J.R, Carrique, L, Fodor, E, Grimes, J.M.
Deposit date:2021-02-13
Release date:2021-12-01
Last modified:2022-02-09
Method:ELECTRON MICROSCOPY (5.96 Å)
Cite:Mapping inhibitory sites on the RNA polymerase of the 1918 pandemic influenza virus using nanobodies.
Nat Commun, 13, 2022
7NJ3
DownloadVisualize
BU of 7nj3 by Molmil
1918 H1N1 Viral influenza polymerase heterotrimer with Nb8196 core
Descriptor: Nanobody8196 core, Polymerase acidic protein, Polymerase basic protein 2,Immunoglobulin G-binding protein A, ...
Authors:Keown, J.R, Carrique, L, Fodor, E, Grimes, J.M.
Deposit date:2021-02-15
Release date:2021-12-01
Last modified:2022-02-09
Method:ELECTRON MICROSCOPY (4.48 Å)
Cite:Mapping inhibitory sites on the RNA polymerase of the 1918 pandemic influenza virus using nanobodies.
Nat Commun, 13, 2022
7NIR
DownloadVisualize
BU of 7nir by Molmil
1918 H1N1 Viral influenza polymerase heterotrimer with Nb8191 core
Descriptor: Nanobody8191 core, Polymerase acidic protein, Polymerase basic protein 2,Immunoglobulin G-binding protein A, ...
Authors:Keown, J.R, Carrique, L, Fodor, E, Grimes, J.M.
Deposit date:2021-02-13
Release date:2021-12-01
Last modified:2022-02-09
Method:ELECTRON MICROSCOPY (6.7 Å)
Cite:Mapping inhibitory sites on the RNA polymerase of the 1918 pandemic influenza virus using nanobodies.
Nat Commun, 13, 2022
7NJ7
DownloadVisualize
BU of 7nj7 by Molmil
1918 H1N1 Viral influenza polymerase heterotrimer with Nb8200 core
Descriptor: Nb8200 core, Polymerase acidic protein, Polymerase basic protein 2,Immunoglobulin G-binding protein A, ...
Authors:Keown, J.R, Carrique, L, Fodor, E, Grimes, J.M.
Deposit date:2021-02-16
Release date:2021-12-01
Last modified:2022-02-09
Method:ELECTRON MICROSCOPY (4.82 Å)
Cite:Mapping inhibitory sites on the RNA polymerase of the 1918 pandemic influenza virus using nanobodies.
Nat Commun, 13, 2022
7NIL
DownloadVisualize
BU of 7nil by Molmil
1918 H1N1 Viral influenza polymerase heterotrimer with Nb8190 core
Descriptor: Nanobody8190 core, Polymerase acidic protein, Polymerase basic protein 2,Immunoglobulin G-binding protein A, ...
Authors:Keown, J.R, Carrique, L, Fodor, E, Grimes, J.M.
Deposit date:2021-02-12
Release date:2021-12-01
Last modified:2022-02-09
Method:ELECTRON MICROSCOPY (5.01 Å)
Cite:Mapping inhibitory sites on the RNA polymerase of the 1918 pandemic influenza virus using nanobodies.
Nat Commun, 13, 2022
7NKC
DownloadVisualize
BU of 7nkc by Molmil
1918 H1N1 Viral influenza polymerase heterotrimer with Nb8207
Descriptor: Nb8207, Polymerase acidic protein, Polymerase basic protein 2,Polymerase basic protein 2, ...
Authors:Keown, J.R, Carrique, L, Fodor, E, Grimes, J.M.
Deposit date:2021-02-17
Release date:2021-12-01
Last modified:2022-02-09
Method:ELECTRON MICROSCOPY (4.46 Å)
Cite:Mapping inhibitory sites on the RNA polymerase of the 1918 pandemic influenza virus using nanobodies.
Nat Commun, 13, 2022
7NK8
DownloadVisualize
BU of 7nk8 by Molmil
1918 H1N1 Viral influenza polymerase heterotrimer with Nb8205 core
Descriptor: Nb8205, Polymerase acidic protein, Polymerase basic protein 2,Polymerase basic protein 2, ...
Authors:Keown, J.R, Carrique, L, Fodor, E, Grimes, J.M.
Deposit date:2021-02-17
Release date:2021-12-01
Last modified:2022-02-09
Method:ELECTRON MICROSCOPY (5.34 Å)
Cite:Mapping inhibitory sites on the RNA polymerase of the 1918 pandemic influenza virus using nanobodies.
Nat Commun, 13, 2022
7NK4
DownloadVisualize
BU of 7nk4 by Molmil
1918 H1N1 Viral influenza polymerase heterotrimer with Nb8203 core
Descriptor: Nanobody 8203, Polymerase acidic protein, Polymerase basic protein 2,Polymerase basic protein 2, ...
Authors:Keown, J.R, Carrique, L, Fodor, E, Grimes, J.M.
Deposit date:2021-02-17
Release date:2021-12-01
Last modified:2022-02-09
Method:ELECTRON MICROSCOPY (5.32 Å)
Cite:Mapping inhibitory sites on the RNA polymerase of the 1918 pandemic influenza virus using nanobodies.
Nat Commun, 13, 2022
7NKR
DownloadVisualize
BU of 7nkr by Molmil
1918 H1N1 Viral influenza polymerase heterotrimer with Nb8210
Descriptor: Nb8210, Polymerase acidic protein, Polymerase basic protein 2,Polymerase basic protein 2, ...
Authors:Keown, J.R, Carrique, L, Fodor, E, Grimes, J.M.
Deposit date:2021-02-18
Release date:2021-12-01
Last modified:2022-02-09
Method:ELECTRON MICROSCOPY (5.6 Å)
Cite:Mapping inhibitory sites on the RNA polymerase of the 1918 pandemic influenza virus using nanobodies.
Nat Commun, 13, 2022
7NKI
DownloadVisualize
BU of 7nki by Molmil
1918 H1N1 Viral influenza polymerase heterotrimer with Nb8209 core
Descriptor: Nb8209, Polymerase acidic protein, Polymerase basic protein 2,Polymerase basic protein 2, ...
Authors:Keown, J.R, Carrique, L, Fodor, E, Grimes, J.M.
Deposit date:2021-02-18
Release date:2021-12-01
Last modified:2022-02-09
Method:ELECTRON MICROSCOPY (4.67 Å)
Cite:Mapping inhibitory sites on the RNA polymerase of the 1918 pandemic influenza virus using nanobodies.
Nat Commun, 13, 2022
7NJ4
DownloadVisualize
BU of 7nj4 by Molmil
1918 H1N1 Viral influenza polymerase heterotrimer with Nb8198 core
Descriptor: Nb8198 Core, Polymerase acidic protein, Polymerase basic protein 2,Immunoglobulin G-binding protein A, ...
Authors:Keown, J.R, Carrique, L, Fodor, E, Grimes, J.M.
Deposit date:2021-02-16
Release date:2021-12-01
Last modified:2022-02-09
Method:ELECTRON MICROSCOPY (5.84 Å)
Cite:Mapping inhibitory sites on the RNA polymerase of the 1918 pandemic influenza virus using nanobodies.
Nat Commun, 13, 2022
7NKA
DownloadVisualize
BU of 7nka by Molmil
1918 H1N1 Viral influenza polymerase heterotrimer with Nb8206
Descriptor: NB8206, Polymerase acidic protein, Polymerase basic protein 2,Polymerase basic protein 2, ...
Authors:Keown, J.R, Carrique, L, Fodor, E, Grimes, J.M.
Deposit date:2021-02-17
Release date:2021-12-01
Last modified:2022-02-09
Method:ELECTRON MICROSCOPY (4.07 Å)
Cite:Mapping inhibitory sites on the RNA polymerase of the 1918 pandemic influenza virus using nanobodies.
Nat Commun, 13, 2022
7NIK
DownloadVisualize
BU of 7nik by Molmil
1918 H1N1 Viral influenza polymerase heterotrimer with Nb8189 core
Descriptor: Nanobody8189 core, Polymerase acidic protein, Polymerase basic protein 2,Immunoglobulin G-binding protein A, ...
Authors:Keown, J.R, Carrique, L, Fodor, E, Grimes, J.M.
Deposit date:2021-02-12
Release date:2021-12-01
Last modified:2022-02-09
Method:ELECTRON MICROSCOPY (6.2 Å)
Cite:Mapping inhibitory sites on the RNA polymerase of the 1918 pandemic influenza virus using nanobodies.
Nat Commun, 13, 2022
7NK6
DownloadVisualize
BU of 7nk6 by Molmil
1918 H1N1 Viral influenza polymerase heterotrimer with Nb8204
Descriptor: Nb8204, Polymerase acidic protein, Polymerase basic protein 2,Polymerase basic protein 2, ...
Authors:Keown, J.R, Carrique, L, Fodor, E, Grimes, J.M.
Deposit date:2021-02-17
Release date:2021-12-01
Last modified:2022-02-09
Method:ELECTRON MICROSCOPY (6.72 Å)
Cite:Mapping inhibitory sites on the RNA polymerase of the 1918 pandemic influenza virus using nanobodies.
Nat Commun, 13, 2022
4JXT
DownloadVisualize
BU of 4jxt by Molmil
CID of human RPRD1A in complex with a phosphorylated peptide from RPB1-CTD
Descriptor: DNA-directed RNA polymerase II subunit RPB1, Regulation of nuclear pre-mRNA domain-containing protein 1A, UNKNOWN ATOM OR ION
Authors:Ni, Z, Xu, C, Tempel, W, El Bakkouri, M, Loppnau, P, Guo, X, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Min, J, Greenblatt, J.F, Structural Genomics Consortium (SGC)
Deposit date:2013-03-28
Release date:2013-11-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:RPRD1A and RPRD1B are human RNA polymerase II C-terminal domain scaffolds for Ser5 dephosphorylation.
Nat.Struct.Mol.Biol., 21, 2014
5VKO
DownloadVisualize
BU of 5vko by Molmil
SPT6 tSH2-RPB1 1468-1500 pT1471, pS1493
Descriptor: DNA-directed RNA polymerase II subunit RPB1, ISOPROPYL ALCOHOL, Transcription elongation factor SPT6
Authors:Sdano, M.A, Whitby, F.G, Hill, C.P.
Deposit date:2017-04-21
Release date:2017-09-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A novel SH2 recognition mechanism recruits Spt6 to the doubly phosphorylated RNA polymerase II linker at sites of transcription.
Elife, 6, 2017
5VKL
DownloadVisualize
BU of 5vkl by Molmil
SPT6 tSH2-RPB1 1476-1500 pS1493
Descriptor: DNA-directed RNA polymerase II subunit RPB1, Transcription elongation factor SPT6
Authors:Sdano, M.A, Whitby, F.G, Hill, C.P.
Deposit date:2017-04-21
Release date:2017-10-25
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.198 Å)
Cite:A novel SH2 recognition mechanism recruits Spt6 to the doubly phosphorylated RNA polymerase II linker at sites of transcription.
Elife, 6, 2017
7NKY
DownloadVisualize
BU of 7nky by Molmil
RNA Polymerase II-Spt4/5-nucleosome-FACT structure
Descriptor: Chromatin elongation factor SPT4, DNA (138-MER), DNA (148-MER), ...
Authors:Farnung, L, Ochmann, M, Engeholm, M, Cramer, P.
Deposit date:2021-02-19
Release date:2021-07-07
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural basis of nucleosome transcription mediated by Chd1 and FACT.
Nat.Struct.Mol.Biol., 28, 2021
2E9Z
DownloadVisualize
BU of 2e9z by Molmil
Foot-and-mouth disease virus RNA-polymerase in complex with a template- primer RNA, ATP and UTP
Descriptor: 5'-R(*CP*AP*UP*GP*GP*GP*CP*CP*C)-3', 5'-R(*GP*GP*GP*CP*CP*CP*A)-3', MAGNESIUM ION, ...
Authors:Ferrer-Orta, C, Arias, A, Perez-Luque, R, Escarmis, C, Domingo, E, Verdaguer, N.
Deposit date:2007-01-29
Release date:2007-06-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3 Å)
Cite:Sequential structures provide insights into the fidelity of RNA replication
Proc.Natl.Acad.Sci.Usa, 104, 2007

221051

數據於2024-06-12公開中

PDB statisticsPDBj update infoContact PDBjnumon