PDB: 97814 resultsInfo pagesStatus searchChemie searchBIRD

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7LCN	Structure of SARS-CoV-2 S protein in complex with N-terminal domain antibody DH1050.1 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, DH1050.1 heavy chain, ... Authors: Manne, K, Acharya, P. Deposit date: 2021-01-11 Release date: 2021-01-27 Last modified: 2021-08-18 Method: ELECTRON MICROSCOPY (3.35 Å) Cite: In vitro and in vivo functions of SARS-CoV-2 infection-enhancing and neutralizing antibodies. Cell, 184, 2021
4GUS	Crystal structure of LSD2-NPAC with H3 in space group P3221 Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, Histone H3.3, ... Authors: Chen, F, Dong, Z, Fang, J, Yang, Y, Li, Z, Xu, Y, Yang, H, Wang, P, Fang, R, Shi, Y, Xu, Y. Deposit date: 2012-08-29 Release date: 2013-01-16 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.23 Å) Cite: LSD2/KDM1B and its cofactor NPAC/GLYR1 endow a structural and molecular model for regulation of H3K4 demethylation Mol.Cell, 49, 2013
7LAB	Structure of SARS-CoV-2 S protein in complex with N-terminal domain antibody DH1052 Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, DH1052 heavy chain, ... Authors: Manne, K, Acharya, P. Deposit date: 2021-01-06 Release date: 2021-03-10 Last modified: 2021-08-18 Method: ELECTRON MICROSCOPY (2.97 Å) Cite: In vitro and in vivo functions of SARS-CoV-2 infection-enhancing and neutralizing antibodies. Cell, 184, 2021
7LUA	Cryo-EM structure of DH898.1 Fab-dimer bound near the CD4 binding site of HIV-1 Env CH848 SOSIP trimer Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CH848 SOSIP gp120, ... Authors: Manne, K, Edwards, R.J, Acharya, P. Deposit date: 2021-02-21 Release date: 2021-03-17 Last modified: 2021-06-09 Method: ELECTRON MICROSCOPY (4.7 Å) Cite: Fab-dimerized glycan-reactive antibodies are a structural category of natural antibodies. Cell, 184, 2021
7LU9	Cryo-EM structure of DH851.3 bound to HIV-1 CH505 Env Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... Authors: Manne, K, Edwards, R.J, Acharya, P. Deposit date: 2021-02-21 Release date: 2021-03-24 Last modified: 2021-06-09 Method: ELECTRON MICROSCOPY (5.6 Å) Cite: Fab-dimerized glycan-reactive antibodies are a structural category of natural antibodies. Cell, 184, 2021
7LWJ	Mink Cluster 5-associated SARS-CoV-2 spike protein (S-GSAS-D614G-delFV) in the 3-RBD down conformation Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein Authors: Gobeil, S, Acharya, P. Deposit date: 2021-03-01 Release date: 2021-03-31 Last modified: 2021-08-18 Method: ELECTRON MICROSCOPY (3.24 Å) Cite: Effect of natural mutations of SARS-CoV-2 on spike structure, conformation, and antigenicity. Science, 373, 2021
7LWI	Mink Cluster 5-associated SARS-CoV-2 spike protein (S-GSAS-D614G-delFV) in the 3-RBD down conformation Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein Authors: Gobeil, S, Acharya, P. Deposit date: 2021-03-01 Release date: 2021-03-31 Last modified: 2021-08-18 Method: ELECTRON MICROSCOPY (3.07 Å) Cite: Effect of natural mutations of SARS-CoV-2 on spike structure, conformation, and antigenicity. Science, 373, 2021
7LWM	Mink Cluster 5-associated SARS-CoV-2 spike protein (S-GSAS-D614G-delFV) in the 1-RBD up conformation Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein Authors: Gobeil, S, Acharya, P. Deposit date: 2021-03-01 Release date: 2021-03-31 Last modified: 2021-08-18 Method: ELECTRON MICROSCOPY (2.83 Å) Cite: Effect of natural mutations of SARS-CoV-2 on spike structure, conformation, and antigenicity. Science, 373, 2021
7LWW	Triple mutant (K417N-E484K-N501Y) SARS-CoV-2 spike protein in the 1-RBD-up conformation (S-GSAS-D614G-K417N-E484K-N501Y) Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein Authors: Gobeil, S, Acharya, P. Deposit date: 2021-03-01 Release date: 2021-03-31 Last modified: 2021-08-18 Method: ELECTRON MICROSCOPY (3 Å) Cite: Effect of natural mutations of SARS-CoV-2 on spike structure, conformation, and antigenicity. Science, 373, 2021
7LWO	Mink Cluster 5-associated SARS-CoV-2 spike protein (S-GSAS-D614G-delFV) in the 1-RBD up conformation Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein Authors: Gobeil, S, Acharya, P. Deposit date: 2021-03-01 Release date: 2021-03-31 Last modified: 2021-08-18 Method: ELECTRON MICROSCOPY (2.85 Å) Cite: Effect of natural mutations of SARS-CoV-2 on spike structure, conformation, and antigenicity. Science, 373, 2021
7LYM	South African (B.1.351) SARS-CoV-2 spike protein variant (S-GSAS-B.1.351) in the RBD-down conformation Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein Authors: Gobeil, S, Acharya, P. Deposit date: 2021-03-07 Release date: 2021-03-31 Last modified: 2021-08-18 Method: ELECTRON MICROSCOPY (3.57 Å) Cite: Effect of natural mutations of SARS-CoV-2 on spike structure, conformation, and antigenicity. Science, 373, 2021
4PU4	Shewanella oneidensis MR-1 Toxin Antitoxin System HipA, HipB and its operator DNA complex (space group P21) Descriptor: Operator DNA, Toxin-antitoxin system antidote transcriptional repressor Xre family, Toxin-antitoxin system toxin HipA family Authors: Wen, Y, Behiels, E, Felix, J, Elegheert, J, Vergauwen, B, Devreese, B, Savvides, S. Deposit date: 2014-03-12 Release date: 2014-08-06 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (3.786 Å) Cite: The bacterial antitoxin HipB establishes a ternary complex with operator DNA and phosphorylated toxin HipA to regulate bacterial persistence. Nucleic Acids Res., 42, 2014
7LWT	UK (B.1.1.7) SARS-CoV-2 spike protein variant (S-GSAS-B.1.1.7) in the 1-RBD-up conformation Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein Authors: Gobeil, S, Acharya, P. Deposit date: 2021-03-01 Release date: 2021-03-31 Last modified: 2021-08-18 Method: ELECTRON MICROSCOPY (3.19 Å) Cite: Effect of natural mutations of SARS-CoV-2 on spike structure, conformation, and antigenicity. Science, 373, 2021
7LWU	UK (B.1.1.7) SARS-CoV-2 spike protein variant (S-GSAS-B.1.1.7) in the 1-RBD-up conformation Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein Authors: Gobeil, S, Acharya, P. Deposit date: 2021-03-01 Release date: 2021-03-31 Last modified: 2021-08-18 Method: ELECTRON MICROSCOPY (3.22 Å) Cite: Effect of natural mutations of SARS-CoV-2 on spike structure, conformation, and antigenicity. Science, 373, 2021
7LWV	UK (B.1.1.7) SARS-CoV-2 spike protein variant (S-GSAS-B.1.1.7) in the 1-RBD-up conformation Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein Authors: Gobeil, S, Acharya, P. Deposit date: 2021-03-01 Release date: 2021-03-31 Last modified: 2021-08-18 Method: ELECTRON MICROSCOPY (3.12 Å) Cite: Effect of natural mutations of SARS-CoV-2 on spike structure, conformation, and antigenicity. Science, 373, 2021
7LWQ	Mink Cluster 5-associated SARS-CoV-2 spike protein(S-GSAS-D614G-delFV) missing the S1 subunit and SD2 subdomain of one protomer Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein Authors: Gobeil, S, Acharya, P. Deposit date: 2021-03-01 Release date: 2021-03-31 Last modified: 2021-08-18 Method: ELECTRON MICROSCOPY (3.44 Å) Cite: Effect of natural mutations of SARS-CoV-2 on spike structure, conformation, and antigenicity. Science, 373, 2021
7LWL	Mink Cluster 5-associated SARS-CoV-2 spike protein (S-GSAS-D614G-delFV) in the 3-RBD down conformation Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein Authors: Gobeil, S, Acharya, P. Deposit date: 2021-03-01 Release date: 2021-03-31 Last modified: 2021-08-18 Method: ELECTRON MICROSCOPY (2.84 Å) Cite: Effect of natural mutations of SARS-CoV-2 on spike structure, conformation, and antigenicity. Science, 373, 2021
7LWK	Mink Cluster 5-associated SARS-CoV-2 spike protein (S-GSAS-D614G-delFV) in the 3-RBD down conformation Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein Authors: Gobeil, S, Acharya, P. Deposit date: 2021-03-01 Release date: 2021-03-31 Last modified: 2021-08-18 Method: ELECTRON MICROSCOPY (2.92 Å) Cite: Effect of natural mutations of SARS-CoV-2 on spike structure, conformation, and antigenicity. Science, 373, 2021
4PU7	Shewanella oneidensis Toxin Antitoxin System Antitoxin Protein HipB Resolution 1.85 Descriptor: Toxin-antitoxin system antidote transcriptional repressor Xre family Authors: Wen, Y, Behiels, E, Felix, J, Elegheert, J, Vergauwen, B, Devreese, B, Savvides, S. Deposit date: 2014-03-12 Release date: 2014-08-06 Last modified: 2023-09-20 Method: X-RAY DIFFRACTION (1.85 Å) Cite: The bacterial antitoxin HipB establishes a ternary complex with operator DNA and phosphorylated toxin HipA to regulate bacterial persistence. Nucleic Acids Res., 42, 2014
7LWP	Mink Cluster 5-associated SARS-CoV-2 spike protein (S-GSAS-D614G-delFV) in the 2-RBD up conformation Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein Authors: Gobeil, S, Acharya, P. Deposit date: 2021-03-01 Release date: 2021-03-31 Last modified: 2021-08-18 Method: ELECTRON MICROSCOPY (3.01 Å) Cite: Effect of natural mutations of SARS-CoV-2 on spike structure, conformation, and antigenicity. Science, 373, 2021
7LWN	Mink Cluster 5-associated SARS-CoV-2 spike protein (S-GSAS-D614G-delFV) in the 1-RBD up conformation Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein Authors: Gobeil, S, Acharya, P. Deposit date: 2021-03-01 Release date: 2021-03-31 Last modified: 2021-08-18 Method: ELECTRON MICROSCOPY (2.94 Å) Cite: Effect of natural mutations of SARS-CoV-2 on spike structure, conformation, and antigenicity. Science, 373, 2021
4GUR	Crystal structure of LSD2-NPAC with H3 in space group P21 Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, Histone H3.3, ... Authors: Chen, F, Dong, Z, Fang, J, Yang, Y, Li, Z, Xu, Y, Yang, H, Wang, P, Fang, R, Shi, Y, Xu, Y. Deposit date: 2012-08-29 Release date: 2013-01-16 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.506 Å) Cite: LSD2/KDM1B and its cofactor NPAC/GLYR1 endow a structural and molecular model for regulation of H3K4 demethylation Mol.Cell, 49, 2013
4GUT	Crystal structure of LSD2-NPAC Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, Lysine-specific histone demethylase 1B, ... Authors: Chen, F, Dong, Z, Fang, J, Yang, Y, Li, Z, Xu, Y, Yang, H, Wang, P, Fang, R, Shi, Y, Xu, Y. Deposit date: 2012-08-29 Release date: 2013-01-16 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (1.998 Å) Cite: LSD2/KDM1B and its cofactor NPAC/GLYR1 endow a structural and molecular model for regulation of H3K4 demethylation Mol.Cell, 49, 2013
4GU1	Crystal structure of LSD2 Descriptor: CHLORIDE ION, FLAVIN-ADENINE DINUCLEOTIDE, Lysine-specific histone demethylase 1B, ... Authors: Chen, F, Dong, Z, Fang, J, Yang, Y, Li, Z, Xu, Y, Yang, H, Wang, P, Fang, R, Shi, Y, Xu, Y. Deposit date: 2012-08-29 Release date: 2013-01-16 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.939 Å) Cite: LSD2/KDM1B and its cofactor NPAC/GLYR1 endow a structural and molecular model for regulation of H3K4 demethylation Mol.Cell, 49, 2013
4GUU	Crystal structure of LSD2-NPAC with tranylcypromine Descriptor: Lysine-specific histone demethylase 1B, Putative oxidoreductase GLYR1, ZINC ION, ... Authors: Chen, F, Dong, Z, Fang, J, Yang, Y, Li, Z, Xu, Y, Yang, H, Wang, P, Xu, Y. Deposit date: 2012-08-29 Release date: 2013-01-16 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.302 Å) Cite: LSD2/KDM1B and its cofactor NPAC/GLYR1 endow a structural and molecular model for regulation of H3K4 demethylation Mol.Cell, 49, 2013

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