Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2CBB
DownloadVisualize
BU of 2cbb by Molmil
STRUCTURE OF NATIVE AND APO CARBONIC ANHYDRASE II AND SOME OF ITS ANION-LIGAND COMPLEXES
Descriptor: CARBONIC ANHYDRASE II, ZINC ION
Authors:Hakansson, K, Carlsson, M, Svensson, L.A, Liljas, A.
Deposit date:1992-06-01
Release date:1993-10-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Structure of native and apo carbonic anhydrase II and structure of some of its anion-ligand complexes.
J.Mol.Biol., 227, 1992
2CBE
DownloadVisualize
BU of 2cbe by Molmil
STRUCTURE OF NATIVE AND APO CARBONIC ANHYDRASE II AND SOME OF ITS ANION-LIGAND COMPLEXES
Descriptor: CARBONIC ANHYDRASE II
Authors:Hakansson, K, Carlsson, M, Svensson, L.A, Liljas, A.
Deposit date:1992-06-01
Release date:1993-10-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Structure of native and apo carbonic anhydrase II and structure of some of its anion-ligand complexes.
J.Mol.Biol., 227, 1992
2CBD
DownloadVisualize
BU of 2cbd by Molmil
STRUCTURE OF NATIVE AND APO CARBONIC ANHYDRASE II AND SOME OF ITS ANION-LIGAND COMPLEXES
Descriptor: CARBONIC ANHYDRASE II, SULFITE ION, ZINC ION
Authors:Hakansson, K, Carlsson, M, Svensson, L.A, Liljas, A.
Deposit date:1992-06-01
Release date:1993-10-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Structure of native and apo carbonic anhydrase II and structure of some of its anion-ligand complexes.
J.Mol.Biol., 227, 1992
3RUX
DownloadVisualize
BU of 3rux by Molmil
Crystal structure of biotin-protein ligase BirA from Mycobacterium tuberculosis in complex with an acylsulfamide bisubstrate inhibitor
Descriptor: 5'-deoxy-5'-[({5-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanoyl}sulfamoyl)amino]adenosine, BirA bifunctional protein
Authors:Geders, T.W, Finzel, B.C.
Deposit date:2011-05-05
Release date:2011-12-14
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Bisubstrate Adenylation Inhibitors of Biotin Protein Ligase from Mycobacterium tuberculosis.
Chem.Biol., 18, 2011
2CBA
DownloadVisualize
BU of 2cba by Molmil
STRUCTURE OF NATIVE AND APO CARBONIC ANHYDRASE II AND SOME OF ITS ANION-LIGAND COMPLEXES
Descriptor: CARBONIC ANHYDRASE II, ZINC ION
Authors:Hakansson, K, Carlsson, M, Svensson, L.A, Liljas, A.
Deposit date:1992-06-01
Release date:1993-10-31
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Structure of native and apo carbonic anhydrase II and structure of some of its anion-ligand complexes.
J.Mol.Biol., 227, 1992
2OEY
DownloadVisualize
BU of 2oey by Molmil
Solution Structure of a Designed Spirocyclic Helical Ligand Binding at a Two-Base Bulge Site in DNA
Descriptor: (1R,3A'S,10'S,10A'R)-7-METHOXY-2-OXO-10',10A'-DIHYDRO-2H,3A'H-SPIRO[NAPHTHALENE-1,3'-PENTALENO[1,2-B]NAPHTHALEN]-10'-YL 2,6-DIDEOXY-2-(METHYLAMINO)-ALPHA-D-GALACTOPYRANOSIDE, DNA (25-MER)
Authors:Zhang, N, Lin, Y, Xiao, Z, Jones, G.B, Goldberg, I.H.
Deposit date:2007-01-01
Release date:2007-04-10
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution Structure of a Designed Spirocyclic Helical Ligand Binding at a Two-Base Bulge Site in DNA.
Biochemistry, 46, 2007
7BH0
DownloadVisualize
BU of 7bh0 by Molmil
Mutant L39Y of recombinant beta-lactoglobulin in complex with endogenous ligand
Descriptor: Beta-lactoglobulin, CHLORIDE ION, LAURIC ACID
Authors:Loch, J.I, Siuda, M.K, Lewinski, K.
Deposit date:2021-01-09
Release date:2021-01-27
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Interactions of new lactoglobulin variants with tetracaine: crystallographic studies of ligand binding to lactoglobulin mutants possessing single substitution in the binding pocket.
Acta Biochim.Pol., 68, 2021
1K7L
DownloadVisualize
BU of 1k7l by Molmil
The 2.5 Angstrom resolution crystal structure of the human PPARalpha ligand binding domain bound with GW409544 and a co-activator peptide.
Descriptor: 2-(1-METHYL-3-OXO-3-PHENYL-PROPYLAMINO)-3-{4-[2-(5-METHYL-2-PHENYL-OXAZOL-4-YL)-ETHOXY]-PHENYL}-PROPIONIC ACID, Peroxisome proliferator activated receptor alpha, YTTRIUM (III) ION, ...
Authors:Xu, H.E, Lambert, M.H, Montana, V.G, Moore, L.B, Collins, J.L, Oplinger, J.A, Kliewer, S.A, Gampe Jr, R.T, McKee, D.D, Moore, J.T, Willson, T.M.
Deposit date:2001-10-19
Release date:2001-12-05
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural determinants of ligand binding selectivity between the peroxisome proliferator-activated receptors.
Proc.Natl.Acad.Sci.USA, 98, 2001
3A7U
DownloadVisualize
BU of 3a7u by Molmil
Crystal structure of the bovine lipoyltransferase in its unliganded form
Descriptor: Lipoyltransferase 1, mitochondrial
Authors:Fujiwara, K, Hosaka, H, Nakagawa, A.
Deposit date:2009-10-05
Release date:2010-01-19
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.44 Å)
Cite:Global conformational change associated with the two-step reaction catalyzed by Escherichia coli lipoate-protein ligase A.
J.Biol.Chem., 285, 2010
5YSB
DownloadVisualize
BU of 5ysb by Molmil
Crystal structure of beta-1,2-glucooligosaccharide binding protein in ligand-free form
Descriptor: DI(HYDROXYETHYL)ETHER, Lin1841 protein, ZINC ION
Authors:Abe, K, Nakajima, M, Taguchi, H, Arakawa, T, Fushinobu, S.
Deposit date:2017-11-13
Release date:2018-05-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and thermodynamic insights into beta-1,2-glucooligosaccharide capture by a solute-binding protein inListeria innocua.
J. Biol. Chem., 293, 2018
3FL2
DownloadVisualize
BU of 3fl2 by Molmil
Crystal structure of the ring domain of the E3 ubiquitin-protein ligase UHRF1
Descriptor: E3 ubiquitin-protein ligase UHRF1, ZINC ION
Authors:Walker, J.R, Avvakumov, G.V, Xue, S, Li, Y, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Dhe-Paganon, S, Structural Genomics Consortium (SGC)
Deposit date:2008-12-18
Release date:2009-01-20
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure of the Ring Domain of the E3 Ubiquitin-Protein Ligase Uhrf1
To be Published
2DO6
DownloadVisualize
BU of 2do6 by Molmil
Solution structure of RSGI RUH-065, a UBA domain from human cDNA
Descriptor: E3 ubiquitin-protein ligase CBL-B
Authors:Hamada, T, Hirota, H, Lin, Y.-J, Guntert, P, Sato, M, Koshiba, S, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-04-27
Release date:2007-05-08
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of RSGI RUH-065, a UBA domain from human cDNA
To be Published
2QJ0
DownloadVisualize
BU of 2qj0 by Molmil
Structure of the yeast U-box-containing ubiquitin ligase Ufd2p
Descriptor: Ubiquitin conjugation factor E4
Authors:Tu, D, Brunger, A.T.
Deposit date:2007-07-06
Release date:2007-09-18
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Inaugural Article: Structure and function of the yeast U-box-containing ubiquitin ligase Ufd2p.
Proc.Natl.Acad.Sci.Usa, 104, 2007
2E33
DownloadVisualize
BU of 2e33 by Molmil
Structural basis for selection of glycosylated substrate by SCFFbs1 ubiquitin ligase
Descriptor: F-box only protein 2, Ribonuclease pancreatic, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Mizushima, T, Yoshida, Y, Kumanomidou, T, Hasegawa, Y, Yamane, T, Tanaka, K.
Deposit date:2006-11-20
Release date:2007-03-20
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural basis for the selection of glycosylated substrates by SCFFbs1 ubiquitin ligase
Proc.Natl.Acad.Sci.Usa, 104, 2007
6A0R
DownloadVisualize
BU of 6a0r by Molmil
Homoserine dehydrogenase from Thermus thermophilus HB8 unliganded form
Descriptor: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, FORMIC ACID, GLYCEROL, ...
Authors:Akai, S, Ikushiro, H, Sawai, T, Yano, T, Kamiya, N, Miyahara, I.
Deposit date:2018-06-06
Release date:2018-11-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:The crystal structure of homoserine dehydrogenase complexed with l-homoserine and NADPH in a closed form
J. Biochem., 165, 2019
3BLO
DownloadVisualize
BU of 3blo by Molmil
TGT mutant in complex with queuine
Descriptor: 2-amino-5-({[(1S,4S,5R)-4,5-dihydroxycyclopent-2-en-1-yl]amino}methyl)-3,7-dihydro-4H-pyrrolo[2,3-d]pyrimidin-4-one, GLYCEROL, Queuine tRNA-ribosyltransferase, ...
Authors:Tidten, N, Heine, A, Reuter, K, Klebe, G.
Deposit date:2007-12-11
Release date:2008-12-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Investigation of Specificity Determinants in Bacterial tRNA-Guanine Transglycosylase Reveals Queuine, the Substrate of Its Eucaryotic Counterpart, as Inhibitor
Plos One, 8, 2013
5I8F
DownloadVisualize
BU of 5i8f by Molmil
Crystal structure of St. John's wort Hyp-1 protein in complex with melatonin
Descriptor: GLYCEROL, N-[2-(5-methoxy-1H-indol-3-yl)ethyl]acetamide, Phenolic oxidative coupling protein, ...
Authors:Sliwiak, J, Dauter, Z, Jaskolski, M.
Deposit date:2016-02-18
Release date:2016-05-25
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal Structure of Hyp-1, a Hypericum perforatum PR-10 Protein, in Complex with Melatonin.
Front Plant Sci, 7, 2016
3BL3
DownloadVisualize
BU of 3bl3 by Molmil
tRNA guanine transglycosylase V233G mutant apo structure
Descriptor: GLYCEROL, Queuine tRNA-ribosyltransferase, ZINC ION
Authors:Tidten, N, Heine, A, Reuter, K, Klebe, G.
Deposit date:2007-12-10
Release date:2008-12-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Investigation of Specificity Determinants in Bacterial tRNA-Guanine Transglycosylase Reveals Queuine, the Substrate of Its Eucaryotic Counterpart, as Inhibitor
Plos One, 8, 2013
8G7U
DownloadVisualize
BU of 8g7u by Molmil
Cryo-EM structure of Riplet:RIG-I:dsRNA complex (end-semi-closed end)
Descriptor: Antiviral innate immune response receptor RIG-I, E3 ubiquitin-protein ligase RNF135, ZINC ION, ...
Authors:Wang, W, Pyle, A.M.
Deposit date:2023-02-17
Release date:2023-11-15
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (4 Å)
Cite:The E3 ligase Riplet promotes RIG-I signaling independent of RIG-I oligomerization.
Nat Commun, 14, 2023
8G7T
DownloadVisualize
BU of 8g7t by Molmil
Cryo-EM structure of Riplet:RIG-I:dsRNA complex (end-end)
Descriptor: Antiviral innate immune response receptor RIG-I, E3 ubiquitin-protein ligase RNF135, ZINC ION, ...
Authors:Wang, W, Pyle, A.M.
Deposit date:2023-02-17
Release date:2023-11-15
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:The E3 ligase Riplet promotes RIG-I signaling independent of RIG-I oligomerization.
Nat Commun, 14, 2023
8G7V
DownloadVisualize
BU of 8g7v by Molmil
Cryo-EM structure of Riplet:RIG-I:dsRNA complex (end-inter)
Descriptor: Antiviral innate immune response receptor RIG-I, E3 ubiquitin-protein ligase RNF135, ZINC ION, ...
Authors:Wang, W, Pyle, A.M.
Deposit date:2023-02-17
Release date:2023-11-15
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:The E3 ligase Riplet promotes RIG-I signaling independent of RIG-I oligomerization.
Nat Commun, 14, 2023
8G4Y
DownloadVisualize
BU of 8g4y by Molmil
Structure of ZNRF3 ECD bound to peptide MK1-3.6.10
Descriptor: E3 ubiquitin-protein ligase ZNRF3, MK1-3.6.10
Authors:Harris, S.F, Wu, P.
Deposit date:2023-02-10
Release date:2023-12-20
Last modified:2024-07-03
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:Potent and selective binders of the E3 ubiquitin ligase ZNRF3 stimulate Wnt signaling and intestinal organoid growth.
Cell Chem Biol, 31, 2024
2LVO
DownloadVisualize
BU of 2lvo by Molmil
Structure of the gp78CUE domain bound to monubiquitin
Descriptor: E3 ubiquitin-protein ligase AMFR, Ubiquitin
Authors:Liu, S, Chen, Y, Huang, T, Tarasov, S.G, King, A, Li, J, Weissman, A.M, Byrd, R.A, Das, R.
Deposit date:2012-07-09
Release date:2012-11-21
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Promiscuous Interactions of gp78 E3 Ligase CUE Domain with Polyubiquitin Chains.
Structure, 20, 2012
8H8X
DownloadVisualize
BU of 8h8x by Molmil
Cryo-EM structure of HACE1 monomer
Descriptor: E3 ubiquitin-protein ligase HACE1
Authors:Singh, S, Machida, S, Tulsian, N.K, Choong, Y.K, Ng, J, Shanker, S, Yaochen, L.D, Shi, J, Sivaraman, J.
Deposit date:2022-10-24
Release date:2023-06-28
Last modified:2024-01-10
Method:ELECTRON MICROSCOPY (3.92 Å)
Cite:Structural Basis for the Enzymatic Activity of the HACE1 HECT-Type E3 Ligase Through N-Terminal Helix Dimerization.
Adv Sci, 10, 2023
8HAE
DownloadVisualize
BU of 8hae by Molmil
Cryo-EM structure of HACE1 dimer
Descriptor: E3 ubiquitin-protein ligase HACE1
Authors:Singh, S, Machida, S, Tulsian, N.K, Choong, Y.K, Ng, J, Shanker, S, Yaochen, L.D, Shi, J, Sivaraman, J, Machida, S.
Deposit date:2022-10-26
Release date:2023-06-28
Last modified:2023-10-04
Method:ELECTRON MICROSCOPY (4.55 Å)
Cite:Structural Basis for the Enzymatic Activity of the HACE1 HECT-Type E3 Ligase Through N-Terminal Helix Dimerization.
Adv Sci, 10, 2023

222926

數據於2024-07-24公開中

PDB statisticsPDBj update infoContact PDBjnumon