Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7WDS
DownloadVisualize
BU of 7wds by Molmil
Crystal structures of MeBglD2 in complex with various saccharides
Descriptor: Beta-glucosidase, SULFATE ION, beta-D-xylopyranose
Authors:Watanabe, M, Matsuzawa, T, Nakamichi, Y, Akita, H, Yaoi, K.
Deposit date:2021-12-22
Release date:2022-11-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Crystal structure of metagenomic beta-glycosidase MeBglD2 in complex with various saccharides
Appl.Microbiol.Biotechnol., 106, 2022
4QGZ
DownloadVisualize
BU of 4qgz by Molmil
X-ray structure of the adduct formed between hen egg white lysozyme and trans-dimethylamine methylamine dichlorido platinum(II)
Descriptor: Lysozyme C, bis(chloranyl)-(dimethylamino)-(methylamino)platinum
Authors:Russo Krauss, I, Merlino, A.
Deposit date:2014-05-26
Release date:2014-07-30
Last modified:2014-08-20
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Interactions between Anticancer trans-Platinum Compounds and Proteins: Crystal Structures and ESI-MS Spectra of Two Protein Adducts of trans-(Dimethylamino)(methylamino)dichloridoplatinum(II).
Inorg.Chem., 53, 2014
6JG1
DownloadVisualize
BU of 6jg1 by Molmil
Crystal structure of barley exohydrolaseI wildtype in complex with 4I,4III,4V-S-trithiocellohexaose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Barley exohydrolase I, GLYCEROL, ...
Authors:Luang, S, Streltsov, V.A, Hrmova, M.
Deposit date:2019-02-13
Release date:2020-08-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:The evolutionary advantage of an aromatic clamp in plant family 3 glycoside exo-hydrolases.
Nat Commun, 13, 2022
4QHB
DownloadVisualize
BU of 4qhb by Molmil
Crystal structure of a putative hydrolase (BVU_2763) from Bacteroides vulgatus ATCC 8482 at 2.44 A resolution
Descriptor: DI(HYDROXYETHYL)ETHER, SULFATE ION, TETRAETHYLENE GLYCOL, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2014-05-28
Release date:2014-06-18
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Crystal structure of a hypothetical protein (BVU_2763) from Bacteroides vulgatus ATCC 8482 at 2.44 A resolution
To be published
6JGG
DownloadVisualize
BU of 6jgg by Molmil
Crystal structure of barley exohydrolaseI W434F mutant in complex with methyl 2-thio-beta-sophoroside.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, BETA-D-GLUCAN GLUCOHYDROLASE ISOENZYME EXO1, ...
Authors:Luang, S, Streltsov, V.A, Hrmova, M.
Deposit date:2019-02-14
Release date:2020-08-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The evolutionary advantage of an aromatic clamp in plant family 3 glycoside exo-hydrolases.
Nat Commun, 13, 2022
6AWA
DownloadVisualize
BU of 6awa by Molmil
1.83 Angstrom Resolution Crystal Structure of Dihydrolipoyl Dehydrogenase from Pseudomonas putida in Complex with FAD and Adenosine-5'-monophosphate.
Descriptor: ADENOSINE MONOPHOSPHATE, Dihydrolipoyl dehydrogenase, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Minasov, G, Shuvalova, L, Kiryukhina, O, Dubrovska, I, Grimshaw, S, Kwon, K, Anderson, W.F, Satchell, K.J.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2017-09-05
Release date:2017-10-04
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:1.83 Angstrom Resolution Crystal Structure of Dihydrolipoyl Dehydrogenase from Pseudomonas putida in Complex with FAD and Adenosine-5'-monophosphate.
To Be Published
6JGQ
DownloadVisualize
BU of 6jgq by Molmil
Crystal structure of barley exohydrolaseI W434Y mutant in complex with methyl 2-thio-beta-sophoroside.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, BETA-D-GLUCAN GLUCOHYDROLASE ISOENZYME EXO1, GLYCEROL, ...
Authors:Luang, S, Streltsov, V.A, Hrmova, M.
Deposit date:2019-02-14
Release date:2020-08-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:The evolutionary advantage of an aromatic clamp in plant family 3 glycoside exo-hydrolases.
Nat Commun, 13, 2022
4LAF
DownloadVisualize
BU of 4laf by Molmil
Crystal structure of PnpB complex with FMN
Descriptor: FLAVIN MONONUCLEOTIDE, NAD(P)H dehydrogenase (quinone)
Authors:Su, J, Zhang, C, Li, N, Gu, L.
Deposit date:2013-06-19
Release date:2014-06-25
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.761 Å)
Cite:Crystal structure of PnpB complex with FMN
To be Published
6JHP
DownloadVisualize
BU of 6jhp by Molmil
Crystal structure of the glycoside hydrolase family 36 alpha-galactosidase from Paecilomyces thermophila
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Alpha-galactosidase
Authors:Liu, Y, Huang, P, Ma, J, Jiang, Z.
Deposit date:2019-02-18
Release date:2020-05-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.559 Å)
Cite:Crystal structure and phylogenetic analysis of the glycoside hydrolase family 36 alpha-galactosidase from Paecilomyces thermophila
To be published
5WWF
DownloadVisualize
BU of 5wwf by Molmil
Crystal structure of hnRNPA2B1 in complex with RNA
Descriptor: Heterogeneous nuclear ribonucleoproteins A2/B1, RNA
Authors:Wu, B.X, Su, S.C, Ma, J.B.
Deposit date:2017-01-01
Release date:2018-01-17
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Molecular basis for the specific and multivariant recognitions of RNA substrates by human hnRNP A2/B1.
Nat Commun, 9, 2018
6F2J
DownloadVisualize
BU of 6f2j by Molmil
Crystal structure of Hen Egg-White Lysozyme co-crystallized in presence of 100 mM Tb-Xo4 and 100 mM sodium sulfate
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION, ...
Authors:Engilberge, S, Riobe, F, Di Pietro, S, Girard, E, Dumont, E, Maury, O.
Deposit date:2017-11-24
Release date:2018-10-03
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Unveiling the Binding Modes of the Crystallophore, a Terbium-based Nucleating and Phasing Molecular Agent for Protein Crystallography.
Chemistry, 24, 2018
6AX6
DownloadVisualize
BU of 6ax6 by Molmil
The crystal structure of a lysyl hydroxylase from Acanthamoeba polyphaga mimivirus
Descriptor: FE (II) ION, IODIDE ION, Procollagen lysyl hydroxylase and glycosyltransferase
Authors:Guo, H, Tsai, C, Miller, M.D, Alvarado, S, Tainer, J.A, Phillips Jr, G.N, Kurie, J.M.
Deposit date:2017-09-06
Release date:2018-02-21
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.241 Å)
Cite:Pro-metastatic collagen lysyl hydroxylase dimer assemblies stabilized by Fe2+-binding.
Nat Commun, 9, 2018
2IGO
DownloadVisualize
BU of 2igo by Molmil
Crystal structure of pyranose 2-oxidase H167A mutant with 2-fluoro-2-deoxy-D-glucose
Descriptor: 2-deoxy-2-fluoro-beta-D-glucopyranose, FLAVIN-ADENINE DINUCLEOTIDE, Pyranose oxidase
Authors:Divne, C.
Deposit date:2006-09-22
Release date:2006-10-10
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural basis for substrate binding and regioselective oxidation of monosaccharides at c3 by pyranose 2-oxidase.
J.Biol.Chem., 281, 2006
6F4A
DownloadVisualize
BU of 6f4a by Molmil
Yeast mitochondrial RNA degradosome complex mtEXO
Descriptor: Exoribonuclease II, mitochondrial, RNA (5'-R(P*AP*GP*AP*UP*AP*C)-3'), ...
Authors:Razew, M, Nowak, E, Nowotny, M.
Deposit date:2017-11-29
Release date:2018-01-17
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.55 Å)
Cite:Structural analysis of mtEXO mitochondrial RNA degradosome reveals tight coupling of nuclease and helicase components.
Nat Commun, 9, 2018
4LCR
DownloadVisualize
BU of 4lcr by Molmil
The crystal structure of di-Zn dihydropyrimidinase in complex with NCBA
Descriptor: Chromosome 8 SCAF14545, whole genome shotgun sequence, N-(AMINOCARBONYL)-BETA-ALANINE, ...
Authors:Hsieh, Y.C, Chen, M.C, Hsu, C.C, Chan, S.I, Yang, Y.S, Chen, C.J.
Deposit date:2013-06-22
Release date:2013-09-18
Last modified:2014-02-12
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of vertebrate dihydropyrimidinase and complexes from Tetraodon nigroviridis with lysine carbamylation: metal and structural requirements for post-translational modification and function.
J.Biol.Chem., 288, 2013
3IEH
DownloadVisualize
BU of 3ieh by Molmil
Crystal structure of Putative metallopeptidase (YP_001051774.1) from SHEWANELLA BALTICA OS155 at 2.45 A resolution
Descriptor: DI(HYDROXYETHYL)ETHER, GLYCEROL, Putative metallopeptidase, ...
Authors:Joint Center for Structural Genomics (JCSG)
Deposit date:2009-07-22
Release date:2009-08-04
Last modified:2023-02-01
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Crystal structure of Putative metallopeptidase (YP_001051774.1) from SHEWANELLA BALTICA OS155 at 2.45 A resolution
To be published
7WDV
DownloadVisualize
BU of 7wdv by Molmil
Crystal structures of MeBglD2 in complex with various saccharides
Descriptor: Beta-glucosidase, SULFATE ION, beta-D-glucopyranose, ...
Authors:Watanabe, M, Matsuzawa, T, Nakamichi, Y, Akita, H, Yaoi, K.
Deposit date:2021-12-22
Release date:2022-11-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.812 Å)
Cite:Crystal structure of metagenomic beta-glycosidase MeBglD2 in complex with various saccharides
Appl.Microbiol.Biotechnol., 106, 2022
6BB3
DownloadVisualize
BU of 6bb3 by Molmil
Lactate Dehydrogenase in complex with inhibitor 3-((2-chlorophenyl)thio)-6-(6-((4-fluorophenyl)amino)pyridin-2-yl)-4-hydroxy-6-(thiophen-3-yl)-5,6-dihydro-2H-pyran-2-one
Descriptor: (6R)-3-[(2-chlorophenyl)sulfanyl]-6-{6-[(4-fluorophenyl)amino]pyridin-2-yl}-4-hydroxy-6-(thiophen-3-yl)-5,6-dihydro-2H-pyran-2-one, L-lactate dehydrogenase A chain, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Chen, Z, Eigenbrot, C.
Deposit date:2017-10-16
Release date:2018-10-24
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure-guided optimization and in vivo activities of hydroxylactone and hydroxylactam Inhibitors of Human Lactate Dehydrogenase
To Be Published
2VS0
DownloadVisualize
BU of 2vs0 by Molmil
Structural analysis of homodimeric staphylococcal aureus virulence factor EsxA
Descriptor: CACODYLATE ION, VIRULENCE FACTOR ESXA, ZINC ION
Authors:Sundaramoorthy, R, Fyfe, P.K, Hunter, W.N.
Deposit date:2008-04-17
Release date:2008-08-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure of Staphylococcus Aureus Esxa Suggests a Contribution to Virulence by Action as a Transport Chaperone and/or Adaptor Protein.
J.Mol.Biol., 383, 2008
6J33
DownloadVisualize
BU of 6j33 by Molmil
Crystal structure of ligand-free of PulA from Klebsiella pneumoniae
Descriptor: ACETATE ION, CALCIUM ION, MAGNESIUM ION, ...
Authors:Saka, N, Iwamoto, H, Takahashi, N, Mizutani, K, Mikami, B.
Deposit date:2019-01-09
Release date:2019-09-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.297 Å)
Cite:Relationship between the induced-fit loop and the activity of Klebsiella pneumoniae pullulanase.
Acta Crystallogr D Struct Biol, 75, 2019
4QM9
DownloadVisualize
BU of 4qm9 by Molmil
Crystal Structure of a Putative Cysteine Dioxygenase From Bacillus subtilis with Cys-bound
Descriptor: CYSTEINE, Cysteine dioxygenase, FE (III) ION
Authors:Hartman, S.H, Driggers, C.M, Karplus, P.A.
Deposit date:2014-06-15
Release date:2014-11-19
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of Arg- and Gln-type bacterial cysteine dioxygenase homologs.
Protein Sci., 24, 2015
6BDJ
DownloadVisualize
BU of 6bdj by Molmil
Crystal structure of dioxygenase Tetur07g02040
Descriptor: FE (III) ION, Tetur07g02040
Authors:Daneshian, L, Schlachter, C.R, Chruszcz, M.
Deposit date:2017-10-23
Release date:2018-11-14
Last modified:2019-05-29
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural and functional characterization of an intradiol ring-cleavage dioxygenase from the polyphagous spider mite herbivore Tetranychus urticae Koch.
Insect Biochem.Mol.Biol., 107, 2019
4L40
DownloadVisualize
BU of 4l40 by Molmil
Structure of the P450 OleT with a C20 fatty acid substrate bound
Descriptor: PROTOPORPHYRIN IX CONTAINING FE, Terminal olefin-forming fatty acid decarboxylase, icosanoic acid
Authors:Leys, D.
Deposit date:2013-06-07
Release date:2013-11-27
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure and Biochemical Properties of the Alkene Producing Cytochrome P450 OleTJE (CYP152L1) from the Jeotgalicoccus sp. 8456 Bacterium.
J.Biol.Chem., 289, 2014
7VZS
DownloadVisualize
BU of 7vzs by Molmil
FAD-dpendent Glucose Dehydrogenase complexed with an inhibitor at pH7.56
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, D-glucal, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Nakajima, Y.
Deposit date:2021-11-16
Release date:2022-11-16
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Conformational change of catalytic residue in reduced enzyme of FAD-dependent Glucose Dehydrogenase at pH6.5
To Be Published
5W3Z
DownloadVisualize
BU of 5w3z by Molmil
Crystal structure of SsoPox AsC6 mutant (L72I-Y99F-I122L-L228M-F229S-W263L)
Descriptor: 1,2-ETHANEDIOL, Aryldialkylphosphatase, COBALT (II) ION, ...
Authors:Hiblot, J, Gotthard, G, Jacquet, P, Daude, D, Bergonzi, C, Chabriere, E, Elias, M.
Deposit date:2017-06-08
Release date:2018-01-10
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Rational engineering of a native hyperthermostable lactonase into a broad spectrum phosphotriesterase.
Sci Rep, 7, 2017

224004

數據於2024-08-21公開中

PDB statisticsPDBj update infoContact PDBjnumon