PDB: 2874 resultsInfo pagesStatus searchChemie searchBIRD

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5WYJ	Cryo-EM structure of the 90S small subunit pre-ribosome (Dhr1-depleted, Enp1-TAP, state 1) Descriptor: 13 kDa ribonucleoprotein-associated protein, 18S ribosomal RNA, 40S ribosomal protein S1-A, ... Authors: Ye, K, Zhu, X, Sun, Q. Deposit date: 2017-01-13 Release date: 2017-03-29 Last modified: 2019-10-09 Method: ELECTRON MICROSCOPY (8.7 Å) Cite: Molecular architecture of the 90S small subunit pre-ribosome. Elife, 6, 2017
5UPK	CDC42 binds PAK4 via an extended GTPase-effector interface - 3 peptide: PAK4cat, PAK4-N45, CDC42 Descriptor: Cell division control protein 42 homolog, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ... Authors: Ha, B.H, Boggon, T.J. Deposit date: 2017-02-03 Release date: 2017-12-27 Last modified: 2023-10-04 Method: X-RAY DIFFRACTION (2.4 Å) Cite: CDC42 binds PAK4 via an extended GTPase-effector interface. Proc. Natl. Acad. Sci. U.S.A., 115, 2018
4YDH	The structure of human FMNL1 N-terminal domains bound to Cdc42 Descriptor: Cell division control protein 42 homolog, Formin-like protein 1, MAGNESIUM ION, ... Authors: Kuhn, S, Anand, K, Geyer, M. Deposit date: 2015-02-22 Release date: 2015-05-13 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (3.8 Å) Cite: The structure of FMNL2-Cdc42 yields insights into the mechanism of lamellipodia and filopodia formation. Nat Commun, 6, 2015
5C2J	Complex structure of the GAP domain of MgcRacGAP and Cdc42 Descriptor: ALUMINUM FLUORIDE, Cell division control protein 42 homolog, GUANOSINE-5'-DIPHOSPHATE, ... Authors: Murayama, K, Kato-Murayama, M, Hosaka, T, Kitamura, T, Yokoyama, S, Shirouzu, M. Deposit date: 2015-06-16 Release date: 2016-06-22 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Structural basis of G-protein target alternation of MgcRacGAP by phospholylation To Be Published
8SCZ	Cryo-EM structure of 14aa-GS RIG-I in complex with p3SLR30 Descriptor: Antiviral innate immune response receptor RIG-I, ZINC ION, p3SLR30 Authors: Wang, W, Pyle, A.M. Deposit date: 2023-04-06 Release date: 2024-03-13 Method: ELECTRON MICROSCOPY (3.4 Å) Cite: Cryo-EM structure of 14aa-GS RIG-I in complex with p3SLR30 To Be Published
8S5I	Full-length human cystathionine beta-synthase with C-terminal 6xHis-tag, basal state, single particle reconstruction Descriptor: Cystathionine beta-synthase, PROTOPORPHYRIN IX CONTAINING FE Authors: McCorvie, T.J, Yue, W.W. Deposit date: 2024-02-23 Release date: 2024-04-17 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Architecture and regulation of filamentous human cystathionine beta-synthase. Nat Commun, 15, 2024
8S5L	Full-length human cystathionine beta-synthase, basal state, partially degraded tetramer Descriptor: Cystathionine beta-synthase, PROTOPORPHYRIN IX CONTAINING FE, PYRIDOXAL-5'-PHOSPHATE Authors: McCorvie, T.J, Yue, W.W. Deposit date: 2024-02-23 Release date: 2024-04-17 Method: ELECTRON MICROSCOPY (3.8 Å) Cite: Architecture and regulation of filamentous human cystathionine beta-synthase. Nat Commun, 15, 2024
8SD0	Cryo-EM structure of RIG-I in complex with p3SLR14 Descriptor: Antiviral innate immune response receptor RIG-I, ZINC ION, p3SLR14 Authors: Wang, W, Pyle, A.M. Deposit date: 2023-04-06 Release date: 2024-03-13 Method: ELECTRON MICROSCOPY (3.8 Å) Cite: Cryo-EM structure of RIG-I in complex with p3SLR14 To Be Published
8S5J	Full-length human cystathionine beta-synthase, basal state, helical reconstruction Descriptor: Cystathionine beta-synthase, PROTOPORPHYRIN IX CONTAINING FE Authors: McCorvie, T.J, Yue, W.W. Deposit date: 2024-02-23 Release date: 2024-04-17 Method: ELECTRON MICROSCOPY (3.9 Å) Cite: Architecture and regulation of filamentous human cystathionine beta-synthase. Nat Commun, 15, 2024
8S5K	Full-length human cystathionine beta-synthase, basal state, single particle reconstruction Descriptor: Cystathionine beta-synthase, PROTOPORPHYRIN IX CONTAINING FE Authors: McCorvie, T.J, Yue, W.W. Deposit date: 2024-02-23 Release date: 2024-04-17 Method: ELECTRON MICROSCOPY (3.8 Å) Cite: Architecture and regulation of filamentous human cystathionine beta-synthase. Nat Commun, 15, 2024
8S5H	Full-length human cystathionine beta-synthase with C-terminal 6xHis-tag, basal state, helical reconstruction Descriptor: Cystathionine beta-synthase, PROTOPORPHYRIN IX CONTAINING FE Authors: McCorvie, T.J, Yue, W.W. Deposit date: 2024-02-23 Release date: 2024-04-17 Method: ELECTRON MICROSCOPY (3.7 Å) Cite: Architecture and regulation of filamentous human cystathionine beta-synthase. Nat Commun, 15, 2024
8S5M	Full-length human cystathionine beta-synthase with C-terminal 6xHis-tag, SAM bound, activated state, helical reconstruction Descriptor: Cystathionine beta-synthase, S-ADENOSYLMETHIONINE Authors: McCorvie, T.J, Yue, W.W. Deposit date: 2024-02-23 Release date: 2024-04-17 Method: ELECTRON MICROSCOPY (4 Å) Cite: Architecture and regulation of filamentous human cystathionine beta-synthase. Nat Commun, 15, 2024
6J30	yeast proteasome in Ub-engaged state (C2) Descriptor: 26S proteasome complex subunit SEM1, 26S proteasome regulatory subunit 4 homolog, 26S proteasome regulatory subunit 6A, ... Authors: Cong, Y. Deposit date: 2019-01-03 Release date: 2019-03-20 Last modified: 2019-11-06 Method: ELECTRON MICROSCOPY (4.5 Å) Cite: Structural Snapshots of 26S Proteasome Reveal Tetraubiquitin-Induced Conformations. Mol. Cell, 73, 2019
6J2N	yeast proteasome in substrate-processing state (C3-b) Descriptor: 26S protease regulatory subunit 4 homolog, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B homolog, ... Authors: Cong, Y. Deposit date: 2019-01-02 Release date: 2019-03-20 Last modified: 2019-11-06 Method: ELECTRON MICROSCOPY (7.5 Å) Cite: Structural Snapshots of 26S Proteasome Reveal Tetraubiquitin-Induced Conformations. Mol. Cell, 73, 2019
6J2C	Yeast proteasome in translocation competent state (C3-a) Descriptor: 26S protease regulatory subunit 4 homolog, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B homolog, ... Authors: Cong, Y. Deposit date: 2019-01-01 Release date: 2019-03-13 Last modified: 2019-11-06 Method: ELECTRON MICROSCOPY (7 Å) Cite: Structural Snapshots of 26S Proteasome Reveal Tetraubiquitin-Induced Conformations. Mol. Cell, 73, 2019
6J2X	Yeast proteasome in resting state (C1-a) Descriptor: 26S PROTEASE REGULATORY SUBUNIT 4 HOMOLOG, 26S PROTEASOME REGULATORY SUBUNIT RPN5, 26S proteasome complex subunit SEM1, ... Authors: Cong, Y. Deposit date: 2019-01-03 Release date: 2019-03-13 Last modified: 2019-11-06 Method: ELECTRON MICROSCOPY (3.8 Å) Cite: Structural Snapshots of 26S Proteasome Reveal Tetraubiquitin-Induced Conformations. Mol. Cell, 73, 2019
6J2Q	Yeast proteasome in Ub-accepted state (C1-b) Descriptor: 26S protease regulatory subunit 4 homolog, 26S protease regulatory subunit 6A, 26S protease regulatory subunit 6B homolog, ... Authors: Cong, Y. Deposit date: 2019-01-02 Release date: 2019-03-13 Last modified: 2019-04-10 Method: ELECTRON MICROSCOPY (3.8 Å) Cite: Structural Snapshots of 26S Proteasome Reveal Tetraubiquitin-Induced Conformations. Mol. Cell, 73, 2019
8TO0	48-nm repeating structure of doublets from mouse sperm flagella Descriptor: Cilia- and flagella- associated protein 210, Cilia- and flagella-associated protein 107, Cilia- and flagella-associated protein 141, ... Authors: Chen, Z, Shiozak, M, Hass, K.M, Skinner, W, Zhao, S, Guo, C, Polacco, B.J, Yu, Z, Krogan, N.J, Kaake, R.M, Vale, R.D, Agard, D.A. Deposit date: 2023-08-02 Release date: 2023-11-01 Last modified: 2023-11-22 Method: ELECTRON MICROSCOPY (7.7 Å) Cite: De novo protein identification in mammalian sperm using in situ cryoelectron tomography and AlphaFold2 docking. Cell, 186, 2023
8U4O	Structure of CXCL12-bound CXCR4/Gi complex Descriptor: C-X-C chemokine receptor type 4, CHOLESTEROL, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ... Authors: Saotome, K, McGoldrick, L.L, Franklin, M.C. Deposit date: 2023-09-11 Release date: 2024-03-13 Last modified: 2024-10-02 Method: ELECTRON MICROSCOPY (3.29 Å) Cite: Structural insights into CXCR4 modulation and oligomerization. Nat.Struct.Mol.Biol., 2024
4BKG	crystal structure of human diSUMO-2 Descriptor: SMALL UBIQUITIN-RELATED MODIFIER 2 Authors: Keusekotten, K, Bade, V.N, Meyer-Teschendorf, K, Sriramachandran, A, Fischer-Schrader, K, Krause, A, Horst, C, Hofmann, K, Dohmen, R.J, Praefcke, G.J.K. Deposit date: 2013-04-25 Release date: 2013-11-06 Last modified: 2023-12-20 Method: X-RAY DIFFRACTION (2.11 Å) Cite: Multivalent Interactions of the Sumo-Interaction Motifs in the Ring-Finger Protein 4 (Rnf4) Determine the Specificity for Chains of the Small Ubiquitin-Related Modifier (Sumo). Biochem.J., 457, 2014
3QBV	Structure of designed orthogonal interaction between CDC42 and nucleotide exchange domains of intersectin Descriptor: Cell division control protein 42 homolog, GUANOSINE-5'-DIPHOSPHATE, Intersectin-1 Authors: Kapp, G.T, Remenyi, A, Lim, W.A, Kortemme, T. Deposit date: 2011-01-14 Release date: 2012-02-08 Last modified: 2023-09-13 Method: X-RAY DIFFRACTION (2.65 Å) Cite: Control of protein signaling using a computationally designed GTPase/GEF orthogonal pair. Proc.Natl.Acad.Sci.USA, 109, 2012
3GCG	crystal structure of MAP and CDC42 complex Descriptor: Cell division control protein 42 homolog, L0028 (Mitochondria associated protein) Authors: Chai, J, Huang, Z, Feng, Y, Wu, X. Deposit date: 2009-02-22 Release date: 2009-07-21 Last modified: 2024-03-20 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Structural insights into host GTPase isoform selection by a family of bacterial GEF mimics Nat.Struct.Mol.Biol., 16, 2009
4CR2	Deep classification of a large cryo-EM dataset defines the conformational landscape of the 26S proteasome Descriptor: 26S PROTEASE REGULATORY SUBUNIT 4 HOMOLOG, 26S PROTEASE REGULATORY SUBUNIT 6A, 26S PROTEASE REGULATORY SUBUNIT 6B HOMOLOG, ... Authors: Unverdorben, P, Beck, F, Sledz, P, Schweitzer, A, Pfeifer, G, Plitzko, J.M, Baumeister, W, Foerster, F. Deposit date: 2014-02-25 Release date: 2014-04-02 Last modified: 2018-10-03 Method: ELECTRON MICROSCOPY (7.7 Å) Cite: Deep Classification of a Large Cryo-Em Dataset Defines the Conformational Landscape of the 26S Proteasome. Proc.Natl.Acad.Sci.USA, 111, 2014
4CR4	Deep classification of a large cryo-EM dataset defines the conformational landscape of the 26S proteasome Descriptor: 26S PROTEASE REGULATORY SUBUNIT 4 HOMOLOG, 26S PROTEASE REGULATORY SUBUNIT 6A, 26S PROTEASE REGULATORY SUBUNIT 6B HOMOLOG, ... Authors: Unverdorben, P, Beck, F, Sledz, P, Schweitzer, A, Pfeifer, G, Plitzko, J.M, Baumeister, W, Foerster, F. Deposit date: 2014-02-25 Release date: 2014-04-02 Last modified: 2024-05-08 Method: ELECTRON MICROSCOPY (8.8 Å) Cite: Deep Classification of a Large Cryo-Em Dataset Defines the Conformational Landscape of the 26S Proteasome. Proc.Natl.Acad.Sci.USA, 111, 2014
4CR3	Deep classification of a large cryo-EM dataset defines the conformational landscape of the 26S proteasome Descriptor: 26S PROTEASE REGULATORY SUBUNIT 4 HOMOLOG, 26S PROTEASE REGULATORY SUBUNIT 6A, 26S PROTEASE REGULATORY SUBUNIT 6B HOMOLOG, ... Authors: Unverdorben, P, Beck, F, Sledz, P, Schweitzer, A, Pfeifer, G, Plitzko, J.M, Baumeister, W, Foerster, F. Deposit date: 2014-02-25 Release date: 2014-04-02 Last modified: 2024-05-08 Method: ELECTRON MICROSCOPY (9.3 Å) Cite: Deep Classification of a Large Cryo-Em Dataset Defines the Conformational Landscape of the 26S Proteasome. Proc.Natl.Acad.Sci.USA, 111, 2014

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