Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4Q5J
DownloadVisualize
BU of 4q5j by Molmil
Crystal structure of SeMet derivative BRI1 in complex with BKI1
Descriptor: BRI1 kinase inhibitor 1, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Protein BRASSINOSTEROID INSENSITIVE 1
Authors:Wang, J, Wang, J, Chen, L, Wu, J.W, Wang, Z.X.
Deposit date:2014-04-17
Release date:2014-10-29
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.772 Å)
Cite:Structural insights into the negative regulation of BRI1 signaling by BRI1-interacting protein BKI1.
Cell Res., 24, 2014
6I1L
DownloadVisualize
BU of 6i1l by Molmil
Crystal structure of FnCas12a in complex with a crRNA guide and ssDNA target
Descriptor: CITRIC ACID, CRISPR-associated endonuclease Cas12a, MAGNESIUM ION, ...
Authors:Jinek, M, Swarts, D.C.
Deposit date:2018-10-29
Release date:2019-01-23
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.98 Å)
Cite:Mechanistic Insights into the cis- and trans-Acting DNase Activities of Cas12a.
Mol. Cell, 73, 2019
6I1K
DownloadVisualize
BU of 6i1k by Molmil
Crystal structure of catalytically inactive FnCas12a in complex with a crRNA guide and a dsDNA target
Descriptor: 1,2-ETHANEDIOL, CRISPR-associated endonuclease Cas12a, DNA non-target strand (33-MER), ...
Authors:Jinek, M, Swarts, D.C.
Deposit date:2018-10-29
Release date:2019-01-23
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Mechanistic Insights into the cis- and trans-Acting DNase Activities of Cas12a.
Mol. Cell, 73, 2019
7C4O
DownloadVisualize
BU of 7c4o by Molmil
Solution structure of the Orange domain from human protein HES1
Descriptor: Transcription factor HES-1
Authors:Fan, J.S, Nayak, A, Swaminathan, K.
Deposit date:2020-05-18
Release date:2021-05-19
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Induction of Transcriptional Inhibitor Hairy and Enhancer of Split Homolog-1 and the Related Repression of Tumor-Suppressor Thioredoxin-Interacting Protein Are Important Components of Cell-Transformation Program Imposed by Oncogenic Kinase Nucleophosmin-Anaplastic Lymphoma Kinase.
Am J Pathol, 2022
7DAC
DownloadVisualize
BU of 7dac by Molmil
Human RIPK3 amyloid fibril revealed by solid-state NMR
Descriptor: Receptor-interacting serine/threonine-protein kinase 3
Authors:Wu, X.L, Zhang, J, Dong, X.Q, Liu, J, Li, B, Hu, H, Wang, J, Wang, H.Y, Lu, J.X.
Deposit date:2020-10-16
Release date:2021-04-28
Last modified:2024-05-01
Method:SOLID-STATE NMR
Cite:The structure of a minimum amyloid fibril core formed by necroptosis-mediating RHIM of human RIPK3.
Proc.Natl.Acad.Sci.USA, 118, 2021
7DA4
DownloadVisualize
BU of 7da4 by Molmil
Cryo-EM structure of amyloid fibril formed by human RIPK3
Descriptor: Receptor-interacting serine/threonine-protein kinase 3
Authors:Zhao, K, Ma, Y.Y, Sun, Y.P, Li, D, Liu, C.
Deposit date:2020-10-14
Release date:2021-04-28
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4.24 Å)
Cite:The structure of a minimum amyloid fibril core formed by necroptosis-mediating RHIM of human RIPK3.
Proc.Natl.Acad.Sci.USA, 118, 2021
3TIW
DownloadVisualize
BU of 3tiw by Molmil
Crystal structure of p97N in complex with the C-terminus of gp78
Descriptor: CHLORIDE ION, E3 ubiquitin-protein ligase AMFR, Transitional endoplasmic reticulum ATPase
Authors:Haenzelmann, P, Schindelin, H.
Deposit date:2011-08-22
Release date:2011-09-14
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.802 Å)
Cite:The Structural and Functional Basis of the p97/Valosin-containing Protein (VCP)-interacting Motif (VIM): MUTUALLY EXCLUSIVE BINDING OF COFACTORS TO THE N-TERMINAL DOMAIN OF p97.
J.Biol.Chem., 286, 2011
8CC7
DownloadVisualize
BU of 8cc7 by Molmil
Mouse serotonin 5-HT3A receptor in complex with PZ-1939
Descriptor: 1-(3-chlorophenyl)sulfonyl-4-piperazin-1-yl-pyrrolo[3,2-c]quinoline, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Lopez-Sanchez, U, Nury, H.
Deposit date:2023-01-26
Release date:2023-10-11
Last modified:2023-11-22
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Superiority of the Triple-Acting 5-HT 6 R/5-HT 3 R Antagonist and MAO-B Reversible Inhibitor PZ-1922 over 5-HT 6 R Antagonist Intepirdine in Alleviation of Cognitive Deficits in Rats.
J.Med.Chem., 66, 2023
8CC6
DownloadVisualize
BU of 8cc6 by Molmil
Mouse serotonin 5-HT3A receptor in complex with PZ-1922
Descriptor: 1-[(3-chlorophenyl)methyl]-4-piperazin-1-yl-pyrrolo[3,2-c]quinoline, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Lopez-Sanchez, U, Nury, H.
Deposit date:2023-01-26
Release date:2023-10-11
Last modified:2023-11-22
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Superiority of the Triple-Acting 5-HT 6 R/5-HT 3 R Antagonist and MAO-B Reversible Inhibitor PZ-1922 over 5-HT 6 R Antagonist Intepirdine in Alleviation of Cognitive Deficits in Rats.
J.Med.Chem., 66, 2023
2AQL
DownloadVisualize
BU of 2aql by Molmil
Crystal Structure of the MRG15 MRG domain
Descriptor: Mortality factor 4-like protein 1
Authors:Quiocho, F.A, Bowman, B.R.
Deposit date:2005-08-18
Release date:2006-02-28
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Multipurpose MRG domain involved in cell senescence and proliferation exhibits structural homology to a DNA-interacting domain.
Structure, 14, 2006
3BMB
DownloadVisualize
BU of 3bmb by Molmil
Crystal structure of a new RNA polymerase interacting protein
Descriptor: CHLORIDE ION, Regulator of nucleoside diphosphate kinase, SULFATE ION
Authors:Darst, S.A, Lamour, V.
Deposit date:2007-12-12
Release date:2008-10-28
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Crystal structure of Escherichia coli Rnk, a new RNA polymerase-interacting protein.
J.Mol.Biol., 383, 2008
3TL8
DownloadVisualize
BU of 3tl8 by Molmil
The AvrPtoB-BAK1 complex reveals two structurally similar kinaseinteracting domains in a single type III effector
Descriptor: BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1, Effector protein HopAB2
Authors:Chai, J, Cheng, W, Gao, H.
Deposit date:2011-08-29
Release date:2012-01-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Analysis of Pseudomonas syringae AvrPtoB Bound to Host BAK1 Reveals Two Similar Kinase-Interacting Domains in a Type III Effector.
Cell Host Microbe, 10, 2011
7P47
DownloadVisualize
BU of 7p47 by Molmil
Structure of the E3 ligase Smc5/Nse2 in complex with Ubc9-SUMO thioester mimetic
Descriptor: E3 SUMO-protein ligase MMS21, SUMO-conjugating enzyme UBC9, Structural maintenance of chromosomes protein 5, ...
Authors:Lascorz, J, Varejao, N, Reverter, D.
Deposit date:2021-07-09
Release date:2021-11-24
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.314 Å)
Cite:Structural basis for the E3 ligase activity enhancement of yeast Nse2 by SUMO-interacting motifs.
Nat Commun, 12, 2021
6P6J
DownloadVisualize
BU of 6p6j by Molmil
Structure of YbtPQ importer with substrate Ybt-Fe bound
Descriptor: ABC transporter protein, FE (III) ION, inner membrane ABC-transporter, ...
Authors:Wang, Z, Hu, W, Zheng, H.
Deposit date:2019-06-04
Release date:2020-03-04
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Pathogenic siderophore ABC importer YbtPQ adopts a surprising fold of exporter.
Sci Adv, 6, 2020
6OE3
DownloadVisualize
BU of 6oe3 by Molmil
Crystal Structure of HIV-1 Reverse Transcriptase in Complex with 5-(2-(2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy)phenoxy)-7-fluoro-2-naphthonitrile (JLJ635), a Non-nucleoside Inhibitor
Descriptor: 5-{2-[2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy]phenoxy}-7-fluoronaphthalene-2-carbonitrile, HIV-1 REVERSE TRANSCRIPTASE, P51 SUBUNIT, ...
Authors:Bertoletti, N, Kudalkar, S.N, Anderson, K.S, Cisneros Trigo, J.A, Jorgensen, W.L.
Deposit date:2019-03-27
Release date:2019-05-15
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural and pharmacological evaluation of a novel non-nucleoside reverse transcriptase inhibitor as a promising long acting nanoformulation for treating HIV.
Antiviral Res., 167, 2019
5Z0U
DownloadVisualize
BU of 5z0u by Molmil
Thermoactinomyces vulgaris R-47 alpha-amylase I (TVA I) 11 residues (from A363 to N373) deletion mutant (Del11)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, Neopullulanase 1
Authors:Tonozuka, T.
Deposit date:2017-12-21
Release date:2018-02-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Mutagenesis-induced conformational change in domain B of a pullulan-hydrolyzing alpha-amylase TVA I
Amylase, 2, 2018
5Z0T
DownloadVisualize
BU of 5z0t by Molmil
Thermoactinomyces vulgaris R-47 alpha-amylase I (TVA I) mutant A357V/Q359N/Y360E (AQY/VNE)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, Neopullulanase 1
Authors:Tonozuka, T.
Deposit date:2017-12-21
Release date:2018-02-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Mutagenesis-induced conformational change in domain B of a pullulan-hydrolyzing alpha-amylase TVA I
Amylase, 2, 2018
8X3R
DownloadVisualize
BU of 8x3r by Molmil
Crystal structure of human WDR5 in complex with WDR5
Descriptor: WD repeat-containing protein 5
Authors:Liu, Y, Huang, X.
Deposit date:2023-11-14
Release date:2024-05-29
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:The NTE domain of PTEN alpha / beta promotes cancer progression by interacting with WDR5 via its SSSRRSS motif.
Cell Death Dis, 15, 2024
8X3S
DownloadVisualize
BU of 8x3s by Molmil
Crystal structure of human WDR5 in complex with PTEN
Descriptor: Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN, WD repeat-containing protein 5
Authors:Liu, Y, Huang, X, Shang, X.
Deposit date:2023-11-14
Release date:2024-05-29
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:The NTE domain of PTEN alpha / beta promotes cancer progression by interacting with WDR5 via its SSSRRSS motif.
Cell Death Dis, 15, 2024
5W2E
DownloadVisualize
BU of 5w2e by Molmil
HCV NS5B RNA-dependent RNA polymerase in complex with non-nucleoside inhibitor MK-8876
Descriptor: 2-(4-fluorophenyl)-5-(11-fluoro-6H-pyrido[2',3':5,6][1,3]oxazino[3,4-a]indol-2-yl)-N-methyl-6-[methyl(methylsulfonyl)amino]-1-benzofuran-3-carboxamide, Genome polyprotein
Authors:Lesburg, C.A, Ummat, A.
Deposit date:2017-06-06
Release date:2017-08-16
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Development of a New Structural Class of Broadly Acting HCV Non-Nucleoside Inhibitors Leading to the Discovery of MK-8876.
ChemMedChem, 12, 2017
4U7E
DownloadVisualize
BU of 4u7e by Molmil
The crystal structure of the complex of LIP5 NTD and IST1 MIM
Descriptor: IST1 homolog, Vacuolar protein sorting-associated protein VTA1 homolog
Authors:Guo, E.Z, Xu, Z.
Deposit date:2014-07-30
Release date:2015-02-11
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Distinct Mechanisms of Recognizing Endosomal Sorting Complex Required for Transport III (ESCRT-III) Protein IST1 by Different Microtubule Interacting and Trafficking (MIT) Domains.
J.Biol.Chem., 290, 2015
2LAS
DownloadVisualize
BU of 2las by Molmil
Molecular Determinants of Paralogue-Specific SUMO-SIM Recognition
Descriptor: M-IR2_peptide, Small ubiquitin-related modifier 1
Authors:Namanja, A, Li, Y, Su, Y, Wong, S, Lu, J, Colson, L, Wu, C, Li, S, Chen, Y.
Deposit date:2011-03-20
Release date:2011-12-14
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Insights into High Affinity Small Ubiquitin-like Modifier (SUMO) Recognition by SUMO-interacting Motifs (SIMs) Revealed by a Combination of NMR and Peptide Array Analysis.
J.Biol.Chem., 287, 2012
6E31
DownloadVisualize
BU of 6e31 by Molmil
Crystal structure of RIAM in an autoinhibited configuration.
Descriptor: Rap1-interacting adapter molecule
Authors:Chang, Y.C, Su, W, Zhang, H, Huang, Q, Philips, M.R, Wu, J.
Deposit date:2018-07-12
Release date:2019-02-20
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Molecular basis for autoinhibition of RIAM regulated by FAK in integrin activation.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
8A90
DownloadVisualize
BU of 8a90 by Molmil
Crystal structure of FrsH
Descriptor: ACETATE ION, FE (III) ION, GLYCEROL, ...
Authors:Schneberger, N, Wirtz, D.A, Cruesemann, M, Hagelueken, G.
Deposit date:2022-06-27
Release date:2023-07-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.574 Å)
Cite:Adenylation Domain-Guided Recruitment of Trans- Acting Nonheme Monooxygenases in Nonribosomal Peptide Biosynthesis.
Acs Chem.Biol., 18, 2023
8C4L
DownloadVisualize
BU of 8c4l by Molmil
Ferric-siderophore reduction in Shewanella biscestrii: Structural and functional characterization of SbiSIP reveals unforeseen specificity
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Vibriobactin utilization protein ViuB
Authors:Trindade, I.B, Matias, P, Moe, E, Louro, R.O.
Deposit date:2023-01-04
Release date:2024-01-17
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Ferric-siderophore reduction in Shewanella bicestrii: Structural and functional characterization of SbSIP reveals an overlooked specificity of siderophore interacting proteins
To be published

222036

数据于2024-07-03公开中

PDB statisticsPDBj update infoContact PDBjnumon