Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1MT1
DownloadVisualize
BU of 1mt1 by Molmil
The Crystal Structure of Pyruvoyl-dependent Arginine Decarboxylase from Methanococcus jannaschii
Descriptor: AGMATINE, PYRUVOYL-DEPENDENT ARGININE DECARBOXYLASE ALPHA CHAIN, PYRUVOYL-DEPENDENT ARGININE DECARBOXYLASE BETA CHAIN
Authors:Tolbert, W.D, Graham, D.E, White, R.H, Ealick, S.E.
Deposit date:2002-09-20
Release date:2003-03-25
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Pyruvoyl-Dependent Arginine Decarboxylase from Methanococcus jannaschii: Crystal Structures of the Self-Cleaved and S53A Proenzyme Forms
Structure, 11, 2003
6XJD
DownloadVisualize
BU of 6xjd by Molmil
Two mouse cGAS catalytic domain binding to human assembled nucleosome
Descriptor: Cyclic GMP-AMP synthase, DNA (145-MER), Histone H2A type 1, ...
Authors:Xu, P, Li, P, Zhao, B.
Deposit date:2020-06-23
Release date:2020-09-16
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (6.8 Å)
Cite:The molecular basis of tight nuclear tethering and inactivation of cGAS.
Nature, 587, 2020
1N2M
DownloadVisualize
BU of 1n2m by Molmil
The S53A Proenzyme Structure of Methanococcus jannaschii.
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, Pyruvoyl-dependent arginine decarboxylase
Authors:Tolbert, W.D, Graham, D.E, White, R.H, Ealick, S.E.
Deposit date:2002-10-23
Release date:2003-03-25
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Pyruvoyl-Dependent Arginine Decarboxylase from Methanococcus jannaschii: Crystal Structures of the Self-Cleaved and S53A Proenzyme Forms
Structure, 11, 2003
7Z1X
DownloadVisualize
BU of 7z1x by Molmil
Crystal structure of human Gasdermin D complexed with nanobodies VHH-2 and VHH-6
Descriptor: Gasdermin-D, VHH-2, VHH-6
Authors:Kopp, A, Hagelueken, G, Geyer, M.
Deposit date:2022-02-25
Release date:2023-09-06
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Pyroptosis inhibiting nanobodies block Gasdermin D pore formation.
Nat Commun, 14, 2023
8IMF
DownloadVisualize
BU of 8imf by Molmil
Human cGAS catalytic domain bound with baicalein
Descriptor: 5,6,7-trihydroxy-2-phenyl-4H-chromen-4-one, Cyclic GMP-AMP synthase, ZINC ION
Authors:Zhao, W.F, Xu, Y.C.
Deposit date:2023-03-06
Release date:2024-01-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Discovery of novel cGAS inhibitors based on natural flavonoids.
Bioorg.Chem., 140, 2023
8IME
DownloadVisualize
BU of 8ime by Molmil
Human cGAS catalytic domain bound with baicalin
Descriptor: 5,6-dihydroxy-4-oxo-2-phenyl-4H-chromen-7-yl beta-D-glucopyranosiduronic acid, Cyclic GMP-AMP synthase, ZINC ION
Authors:Zhao, W.F, Xu, Y.C.
Deposit date:2023-03-06
Release date:2024-01-03
Method:X-RAY DIFFRACTION (2.63 Å)
Cite:Discovery of novel cGAS inhibitors based on natural flavonoids.
Bioorg.Chem., 140, 2023
8IMG
DownloadVisualize
BU of 8img by Molmil
Human cGAS catalytic domain bound with C20
Descriptor: 2-[2-hydroxy-2-oxoethyl-[3-(7-methoxy-4-methyl-2-oxidanylidene-chromen-3-yl)propanoyl]amino]ethanoic acid, Cyclic GMP-AMP synthase, ZINC ION
Authors:Zhao, W.F, Li, J.M, Xu, Y.C.
Deposit date:2023-03-06
Release date:2024-01-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Discovery of novel cGAS inhibitors based on natural flavonoids.
Bioorg.Chem., 140, 2023
7YW5
DownloadVisualize
BU of 7yw5 by Molmil
Crystal Structure of the ITS1 processing by human ribonuclease ISG20L2 with mutation D327A
Descriptor: Interferon-stimulated 20 kDa exonuclease-like 2
Authors:Yang, X.Y, Liu, X.H.
Deposit date:2022-08-21
Release date:2024-01-17
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.77 Å)
Cite:Molecular mechanism of human ISG20L2 for the ITS1 cleavage in the processing of 18S precursor ribosomal RNA.
Nucleic Acids Res., 52, 2024
1VHR
DownloadVisualize
BU of 1vhr by Molmil
HUMAN VH1-RELATED DUAL-SPECIFICITY PHOSPHATASE
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, HUMAN VH1-RELATED DUAL-SPECIFICITY PHOSPHATASE VHR, SULFATE ION
Authors:Yuvaniyama, J, Denu, J.M, Dixon, J.E, Saper, M.A.
Deposit date:1996-02-20
Release date:1996-06-20
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of the dual specificity protein phosphatase VHR.
Science, 272, 1996
1VJS
DownloadVisualize
BU of 1vjs by Molmil
STRUCTURE OF ALPHA-AMYLASE PRECURSOR
Descriptor: ALPHA-AMYLASE
Authors:Song, H.K, Hwang, K.Y, Chang, C, Suh, S.W.
Deposit date:1996-10-02
Release date:1997-03-12
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of thermostable alpha-amylase from Bacillus licheniformis refined at 1.7 A resolution
Mol.Cell, 7, 1997
2G2L
DownloadVisualize
BU of 2g2l by Molmil
Crystal Structure of the Second PDZ Domain of SAP97 in Complex with a GluR-A C-terminal Peptide
Descriptor: 18-mer peptide from glutamate receptor, ionotropic, AMPA1, ...
Authors:Von Ossowski, I, Oksanen, E, Von Ossowski, L, Cai, C, Sundberg, M, Goldman, A, Keinanen, K.
Deposit date:2006-02-16
Release date:2006-08-29
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal structure of the second PDZ domain of SAP97 in complex with a GluR-A C-terminal peptide
Febs J., 273, 2006
4G8U
DownloadVisualize
BU of 4g8u by Molmil
Rat Heme Oxygenase-1 in complex with Heme and O2 with 13 hr illumination: Laser off
Descriptor: FORMIC ACID, Heme oxygenase 1, OXYGEN MOLECULE, ...
Authors:Sugishima, M, Moffat, K, Noguchi, M.
Deposit date:2012-07-23
Release date:2012-10-31
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Discrimination between CO and O(2) in heme oxygenase: comparison of static structures and dynamic conformation changes following CO photolysis.
Biochemistry, 51, 2012
1EDQ
DownloadVisualize
BU of 1edq by Molmil
CRYSTAL STRUCTURE OF CHITINASE A FROM S. MARCESCENS AT 1.55 ANGSTROMS
Descriptor: CHITINASE A
Authors:Papanikolau, Y, Petratos, K.
Deposit date:2000-01-28
Release date:2000-02-18
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:De novo purification scheme and crystallization conditions yield high-resolution structures of chitinase A and its complex with the inhibitor allosamidin.
Acta Crystallogr.,Sect.D, 59, 2003
1ENT
DownloadVisualize
BU of 1ent by Molmil
X-RAY ANALYSES OF ASPARTIC PROTEINASES. THE THREE-DIMENSIONAL STRUCTURE AT 2.1 ANGSTROMS RESOLUTION OF ENDOTHIAPEPSIN
Descriptor: ENDOTHIAPEPSIN, N-(tert-butoxycarbonyl)-L-phenylalanyl-N-{(1S)-1-[(R)-hydroxy(2-{[(2S)-2-methylbutyl]amino}-2-oxoethyl)phosphoryl]-3-methylbutyl}-3-(1H-imidazol-3-ium-4-yl)-L-alaninamide, SULFATE ION
Authors:Blundell, T.L, Dealwis, C.G.
Deposit date:1992-03-11
Release date:1994-01-31
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:X-ray analyses of aspartic proteinases. The three-dimensional structure at 2.1 A resolution of endothiapepsin.
J.Mol.Biol., 211, 1990
4G7P
DownloadVisualize
BU of 4g7p by Molmil
Rat Heme Oxygenase-1 in complex with Heme and CO with 1 hr Illumination at 100 K: Laser off
Descriptor: CARBON MONOXIDE, FORMIC ACID, Heme oxygenase 1, ...
Authors:Sugishima, M, Moffat, K, Noguchi, M.
Deposit date:2012-07-20
Release date:2012-10-31
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Discrimination between CO and O(2) in heme oxygenase: comparison of static structures and dynamic conformation changes following CO photolysis.
Biochemistry, 51, 2012
4G8P
DownloadVisualize
BU of 4g8p by Molmil
Rat Heme Oxygenase-1 in complex with Heme and CO with 16 hr Illumination: Laser on
Descriptor: CARBON MONOXIDE, FORMIC ACID, Heme oxygenase 1, ...
Authors:Sugishima, M, Moffat, K, Noguchi, M.
Deposit date:2012-07-23
Release date:2012-10-31
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Discrimination between CO and O(2) in heme oxygenase: comparison of static structures and dynamic conformation changes following CO photolysis.
Biochemistry, 51, 2012
1EF2
DownloadVisualize
BU of 1ef2 by Molmil
CRYSTAL STRUCTURE OF MANGANESE-SUBSTITUTED KLEBSIELLA AEROGENES UREASE
Descriptor: MANGANESE (II) ION, UREASE ALPHA SUBUNIT, UREASE BETA SUBUNIT, ...
Authors:Yamaguchi, K, Cosper, N.J, Stalhandske, C, Scott, R.A, Pearson, M.A, Karplus, P.A, Hausinger, R.P.
Deposit date:2000-02-05
Release date:2000-03-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Characterization of metal-substituted Klebsiella aerogenes urease.
J.Biol.Inorg.Chem., 4, 1999
6S8B
DownloadVisualize
BU of 6s8b by Molmil
Cryo-EM structure of the Type III-B Cmr-beta bound to cognate target RNA and AMPPnP, state 1
Descriptor: CRISPR-associated RAMP protein, Cmr4 family, Cmr6 family, ...
Authors:Sofos, N, Montoya, G, Stella, S.
Deposit date:2019-07-09
Release date:2020-07-08
Last modified:2020-09-16
Method:ELECTRON MICROSCOPY (2.41 Å)
Cite:Structures of the Cmr-beta Complex Reveal the Regulation of the Immunity Mechanism of Type III-B CRISPR-Cas.
Mol.Cell, 79, 2020
4G7U
DownloadVisualize
BU of 4g7u by Molmil
Rat Heme Oxygenase-1 in complex with Heme and CO with 16 hr Illumination: Laser off
Descriptor: CARBON MONOXIDE, FORMIC ACID, Heme oxygenase 1, ...
Authors:Sugishima, M, Moffat, K, Noguchi, M.
Deposit date:2012-07-20
Release date:2012-10-31
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Discrimination between CO and O(2) in heme oxygenase: comparison of static structures and dynamic conformation changes following CO photolysis.
Biochemistry, 51, 2012
1E5G
DownloadVisualize
BU of 1e5g by Molmil
Solution structure of central CP module pair of a pox virus complement inhibitor
Descriptor: COMPLEMENT CONTROL PROTEIN C3
Authors:Henderson, C.E, Bromek, K, Mullin, N.P, Smith, B.O, Uhrin, D, Barlow, P.N.
Deposit date:2000-07-25
Release date:2000-08-31
Last modified:2013-07-03
Method:SOLUTION NMR
Cite:Solution Structure and Dynamics of the Central Ccp Module Pair of a Poxvirus Complement Control Protein
J.Mol.Biol., 307, 2001
5WTL
DownloadVisualize
BU of 5wtl by Molmil
Crystal structure of the periplasmic portion of outer membrane protein A (OmpA) from Capnocytophaga gingivalis
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, OmpA family protein, ...
Authors:Dai, S, Tan, K, Ye, S, Zhang, R.
Deposit date:2016-12-13
Release date:2017-12-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.298 Å)
Cite:Structure of thrombospondin type 3 repeats in bacterial outer membrane protein A reveals its intra-repeat disulfide bond-dependent calcium-binding capability.
Cell Calcium, 66, 2017
6EDC
DownloadVisualize
BU of 6edc by Molmil
hcGAS-16bp dsDNA complex
Descriptor: Cyclic GMP-AMP synthase, DNA (5'-D(*AP*AP*AP*TP*TP*GP*CP*CP*GP*AP*AP*GP*AP*CP*GP*AP*A)-3'), DNA (5'-D(*TP*TP*CP*GP*TP*CP*TP*TP*CP*GP*GP*CP*AP*AP*T)-3'), ...
Authors:Xie, W, Lama, L, Adura, C, Glickman, J.F, Tuschl, T, Patel, D.J.
Deposit date:2018-08-09
Release date:2019-05-29
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.712 Å)
Cite:Human cGAS catalytic domain has an additional DNA-binding interface that enhances enzymatic activity and liquid-phase condensation.
Proc.Natl.Acad.Sci.USA, 116, 2019
6S8E
DownloadVisualize
BU of 6s8e by Molmil
Cryo-EM structure of the type III-B Cmr-beta complex bound to non-cognate target RNA
Descriptor: CRISPR-associated RAMP protein, Cmr4 family, Cmr6 family, ...
Authors:Sofos, N, Montoya, G, Stella, S.
Deposit date:2019-07-09
Release date:2020-07-08
Last modified:2020-09-16
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structures of the Cmr-beta Complex Reveal the Regulation of the Immunity Mechanism of Type III-B CRISPR-Cas.
Mol.Cell, 79, 2020
6SHB
DownloadVisualize
BU of 6shb by Molmil
Cryo-EM structure of the Type III-B Cmr-beta bound to cognate target RNA and AMPPnP, state 1, in the presence of ssDNA
Descriptor: CRISPR-associated RAMP protein, Cmr4 family, Cmr6 family, ...
Authors:Sofos, N, Montoya, G, Stella, S.
Deposit date:2019-08-06
Release date:2020-07-08
Last modified:2020-09-16
Method:ELECTRON MICROSCOPY (3.07 Å)
Cite:Structures of the Cmr-beta Complex Reveal the Regulation of the Immunity Mechanism of Type III-B CRISPR-Cas.
Mol.Cell, 79, 2020
7JHD
DownloadVisualize
BU of 7jhd by Molmil
Estrogen Receptor Alpha Ligand Binding Domain Y537S in Complex with TTC-352 and GRIP Peptide
Descriptor: 3-(4-fluorophenyl)-2-(4-hydroxyphenoxy)-1-benzothiophene-6-ol, Estrogen receptor, Nuclear receptor coactivator 2
Authors:Fanning, S.W, Abderraman, B, Maximov, P.Y, Jordan, V.C, Greene, G.L.
Deposit date:2020-07-20
Release date:2020-11-25
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.402 Å)
Cite:Rapid Induction of the Unfolded Protein Response and Apoptosis by Estrogen Mimic TTC-352 for the Treatment of Endocrine-Resistant Breast Cancer.
Mol.Cancer Ther., 20, 2021

222624

数据于2024-07-17公开中

PDB statisticsPDBj update infoContact PDBjnumon