Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6NS5
DownloadVisualize
BU of 6ns5 by Molmil
Crystal structure of fungal lipoxygenase from Fusarium graminearum. Second C2 crystal form.
Descriptor: FE (II) ION, lipoxygenase
Authors:Pakhomova, S, Boeglin, W.E, Neau, D.B, Bartlett, S.G, Brash, A.R, Newcomer, M.E.
Deposit date:2019-01-24
Release date:2019-03-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:An ensemble of lipoxygenase structures reveals novel conformations of the Fe coordination sphere.
Protein Sci., 28, 2019
5C9C
DownloadVisualize
BU of 5c9c by Molmil
CRYSTAL STRUCTURE OF BRAF(V600E) IN COMPLEX WITH LY3009120 COMPND
Descriptor: 1-(3,3-dimethylbutyl)-3-{2-fluoro-4-methyl-5-[7-methyl-2-(methylamino)pyrido[2,3-d]pyrimidin-6-yl]phenyl}urea, CHLORIDE ION, Serine/threonine-protein kinase B-raf
Authors:Edwards, T, Abendroth, J, Chun, L.
Deposit date:2015-06-26
Release date:2015-07-15
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Inhibition of RAF Isoforms and Active Dimers by LY3009120 Leads to Anti-tumor Activities in RAS or BRAF Mutant Cancers.
Cancer Cell, 28, 2015
4PBQ
DownloadVisualize
BU of 4pbq by Molmil
CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM HAEMOPHILUS INFLUENZAE RdAW (HICG_00826, TARGET EFI-510123) WITH BOUND L-GULONATE
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DI(HYDROXYETHYL)ETHER, L-gulonate, ...
Authors:Vetting, M.W, Al Obaidi, N.F, Morisco, L.L, Wasserman, S.R, Stead, M, Attonito, J.D, Scott Glenn, A, Chowdhury, S, Evans, B, Hillerich, B, Love, J, Seidel, R.D, Whalen, K.L, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
Deposit date:2014-04-13
Release date:2014-05-07
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Experimental strategies for functional annotation and metabolism discovery: targeted screening of solute binding proteins and unbiased panning of metabolomes.
Biochemistry, 54, 2015
5HOE
DownloadVisualize
BU of 5hoe by Molmil
Crystal structrue of Est24, a carbohydrate acetylesterase from Sinorhizobium meliloti
Descriptor: HEXAETHYLENE GLYCOL, Hydrolase, PHOSPHATE ION
Authors:Oh, C, Ryu, B.H, An, D.R, Nguyen, D.D, Yoo, W, Kim, T, Ngo, D.T, Kim, H.S, Park, J.S, Kim, K.K, Kim, T.D.
Deposit date:2016-01-19
Release date:2016-04-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structural and Biochemical Characterization of an Octameric Carbohydrate Acetylesterase from Sinorhizobium meliloti.
Febs Lett., 590, 2016
4PDG
DownloadVisualize
BU of 4pdg by Molmil
Crystal structure of a complex between an inhibited LlFpg and a THF containing DNA
Descriptor: 2-sulfanyl-1,9-dihydro-6H-purin-6-one, DNA (5'-D(*CP*TP*CP*TP*TP*TP*(3DR)P*TP*TP*TP*CP*TP*CP*G)-3'), DNA (5'-D(*GP*CP*GP*AP*GP*AP*AP*AP*CP*AP*AP*AP*GP*A)-3'), ...
Authors:Coste, F, Castaing, B.
Deposit date:2014-04-18
Release date:2015-04-01
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Zinc finger oxidation of Fpg/Nei DNA glycosylases by 2-thioxanthine: biochemical and X-ray structural characterization.
Nucleic Acids Res., 42, 2014
6Q1I
DownloadVisualize
BU of 6q1i by Molmil
GH5-4 broad specificity endoglucanase from Clostrdium longisporum
Descriptor: Endoglucanase A
Authors:Bianchetti, C.M, Bingman, C.A, Fox, B.G.
Deposit date:2019-08-04
Release date:2020-08-05
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:A structural and kinetic survey of GH5_4 endoglucanases reveals determinants of broad substrate specificity and opportunities for biomass hydrolysis.
J.Biol.Chem., 295, 2020
5FC6
DownloadVisualize
BU of 5fc6 by Molmil
Murine SMPDL3A in complex with ADP analog AMPCP
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Acid sphingomyelinase-like phosphodiesterase 3a, ...
Authors:Gorelik, A, Illes, K, Superti-Furga, G, Nagar, B.
Deposit date:2015-12-15
Release date:2016-01-27
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.658 Å)
Cite:Structural Basis for Nucleotide Hydrolysis by the Acid Sphingomyelinase-like Phosphodiesterase SMPDL3A.
J.Biol.Chem., 291, 2016
6XWX
DownloadVisualize
BU of 6xwx by Molmil
Crystal structure of the Tof1-Csm3 complex
Descriptor: Chromosome segregation in meiosis protein, Uncharacterized protein,Uncharacterized protein
Authors:Grabarczyk, D.B.
Deposit date:2020-01-24
Release date:2020-05-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal structure and interactions of the Tof1-Csm3 (Timeless-Tipin) fork protection complex.
Nucleic Acids Res., 48, 2020
7PRN
DownloadVisualize
BU of 7prn by Molmil
E1M, D97A, E99A MUTANT OF RH. BLASTICA PORIN
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, PORIN
Authors:Maveyraud, L, Schmid, B, Schulz, G.E.
Deposit date:1998-06-12
Release date:1998-08-12
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Porin mutants with new channel properties.
Protein Sci., 7, 1998
4P14
DownloadVisualize
BU of 4p14 by Molmil
Crystal structure of Canavalia brasiliensis (ConBr) complexed with adenine
Descriptor: 1,2-ETHANEDIOL, ADENINE, CALCIUM ION, ...
Authors:Delatorre, P, Rocha, B.A.M, Silva-Filho, J.C, Teixeira, C.S, Cavada, B.S, Nascimento, K.S, Neto, I.L.B, Nobrega, R.B, Nagano, C.S, Sampaio, A.H, Holanda, E, Leal, R.B.
Deposit date:2014-02-24
Release date:2015-04-15
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of Canavalia brasiliensis (ConBr) complexed with adenine
To Be Published
5CDE
DownloadVisualize
BU of 5cde by Molmil
R372A mutant of Xaa-Pro dipeptidase from Xanthomonas campestris
Descriptor: Proline dipeptidase, SULFATE ION, ZINC ION
Authors:Kumar, A, Are, V, Ghosh, B, Jamdar, S, Makde, R.
Deposit date:2015-07-03
Release date:2016-09-14
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:R372A mutant of Xaa-Pro dipeptidase from Xanthomonas campestris at 1.85 Angstrom resolution
To Be Published
7RLH
DownloadVisualize
BU of 7rlh by Molmil
Cryo-EM structure of human p97-D592N mutant bound to ATPgS.
Descriptor: MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Transitional endoplasmic reticulum ATPase
Authors:Caffrey, B, Zhu, X, Berezuk, A, Tuttle, K, Chittori, S, Subramaniam, S.
Deposit date:2021-07-23
Release date:2021-09-22
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3 Å)
Cite:AAA+ ATPase p97/VCP mutants and inhibitor binding disrupt inter-domain coupling and subsequent allosteric activation.
J.Biol.Chem., 297, 2021
7OMS
DownloadVisualize
BU of 7oms by Molmil
Bs164 in complex with mannocyclophellitol aziridine
Descriptor: (1~{R},2~{R},3~{S},4~{R},5~{R},6~{R})-5-(hydroxymethyl)-7-azabicyclo[4.1.0]heptane-2,3,4-triol, 1,2-ETHANEDIOL, CHLORIDE ION, ...
Authors:McGregor, N, Beenakker, T, Kuo, C.L, Wong, C.S, Offren, W.A, Armstrong, Z, Codee, J.D.C, Aerts, J.M.F.G, Florea, B.I, Overkleeft, H, Davies, G.J.
Deposit date:2021-05-24
Release date:2022-02-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Synthesis of broad-specificity activity-based probes for exo -beta-mannosidases.
Org.Biomol.Chem., 20, 2022
7ORJ
DownloadVisualize
BU of 7orj by Molmil
La Crosse virus polymerase at transcription capped RNA cleavage stage
Descriptor: 5' capped RNA, ADENOSINE-5'-TRIPHOSPHATE, RNA (5'-R(P*AP*CP*GP*AP*GP*UP*GP*UP*CP*GP*UP*AP*CP*CP*AP*AP*G)-3'), ...
Authors:Arragain, B, Durieux Trouilleton, Q, Baudin, F, Cusack, S, Schoehn, G, Malet, H.
Deposit date:2021-06-06
Release date:2022-02-16
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structural snapshots of La Crosse virus polymerase reveal the mechanisms underlying Peribunyaviridae replication and transcription.
Nat Commun, 13, 2022
6XQE
DownloadVisualize
BU of 6xqe by Molmil
Crystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UAA-mRNA, and deacylated P-site tRNA at 3.00A resolution
Descriptor: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Batool, Z, Lomakin, I.B, Bunick, C.G, Polikanov, Y.S.
Deposit date:2020-07-09
Release date:2020-08-05
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3 Å)
Cite:Sarecycline interferes with tRNA accommodation and tethers mRNA to the 70S ribosome.
Proc.Natl.Acad.Sci.USA, 117, 2020
7ORI
DownloadVisualize
BU of 7ori by Molmil
La Crosse virus polymerase at replication late-elongation stage
Descriptor: La Crosse virus polymerase, MAGNESIUM ION, PYROPHOSPHATE 2-, ...
Authors:Arragain, B, Durieux Trouilleton, Q, Baudin, F, Cusack, S, Schoehn, G, Malet, H.
Deposit date:2021-06-06
Release date:2022-02-16
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structural snapshots of La Crosse virus polymerase reveal the mechanisms underlying Peribunyaviridae replication and transcription.
Nat Commun, 13, 2022
7RLG
DownloadVisualize
BU of 7rlg by Molmil
Cryo-EM structure of human p97-D592N mutant bound to ADP.
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Transitional endoplasmic reticulum ATPase
Authors:Caffrey, B, Zhu, X, Berezuk, A, Tuttle, K, Chittori, S, Subramaniam, S.
Deposit date:2021-07-23
Release date:2021-09-22
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:AAA+ ATPase p97/VCP mutants and inhibitor binding disrupt inter-domain coupling and subsequent allosteric activation.
J.Biol.Chem., 297, 2021
6XXV
DownloadVisualize
BU of 6xxv by Molmil
Crystal Structure of a computationally designed Immunogen S2_1.2 in complex with its elicited antibody C57
Descriptor: Antibody C57, Heavy Chain, Light Chain, ...
Authors:Yang, C, Sesterhenn, F, Correia, B.E, Pojer, F.
Deposit date:2020-01-28
Release date:2020-04-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.20116425 Å)
Cite:De novo protein design enables the precise induction of RSV-neutralizing antibodies.
Science, 368, 2020
7ORN
DownloadVisualize
BU of 7orn by Molmil
La Crosse virus polymerase at replication initiation stage
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, La Crosse virus polymerase, MAGNESIUM ION, ...
Authors:Arragain, B, Durieux Trouilleton, Q, Baudin, F, Cusack, S, Schoehn, G, Malet, H.
Deposit date:2021-06-06
Release date:2022-02-16
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structural snapshots of La Crosse virus polymerase reveal the mechanisms underlying Peribunyaviridae replication and transcription.
Nat Commun, 13, 2022
5FJ3
DownloadVisualize
BU of 5fj3 by Molmil
Structure of bovine endothelial nitric oxide synthase heme domain in complex with 7-((4-CHLORO-3-((METHYLAMINO)METHYL) PHENOXY)METHYL)QUINOLIN-2-AMINE in the absence of acetate
Descriptor: 1,2-ETHANEDIOL, 5,6,7,8-TETRAHYDROBIOPTERIN, 7-[[4-chloranyl-3-(methylaminomethyl)phenoxy]methyl]quinolin-2-amine, ...
Authors:Li, H, Poulos, T.L.
Deposit date:2015-10-06
Release date:2015-10-28
Last modified:2015-11-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Phenyl Ether- and Aniline-Containing 2-Aminoquinolines as Potent and Selective Inhibitors of Neuronal Nitric Oxide Synthase.
J.Med.Chem., 58, 2015
7ORL
DownloadVisualize
BU of 7orl by Molmil
La Crosse virus polymerase at transcription initiation stage
Descriptor: 7-METHYL-GUANOSINE-5'-TRIPHOSPHATE-5'-GUANOSINE, MAGNESIUM ION, PYROPHOSPHATE 2-, ...
Authors:Arragain, B, Durieux Trouilleton, Q, Baudin, F, Cusack, S, Schoehn, G, Malet, H.
Deposit date:2021-06-06
Release date:2022-02-16
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structural snapshots of La Crosse virus polymerase reveal the mechanisms underlying Peribunyaviridae replication and transcription.
Nat Commun, 13, 2022
7ORM
DownloadVisualize
BU of 7orm by Molmil
La Crosse virus polymerase at transcription early-elongation stage
Descriptor: MAGNESIUM ION, RNA (5'-R(P*AP*AP*AP*GP*UP*AP*CP*AP*CP*UP*AP*CP*U)-3'), RNA (5'-R(P*AP*CP*GP*AP*GP*UP*GP*UP*CP*GP*UP*AP*CP*C)-3'), ...
Authors:Arragain, B, Durieux Trouilleton, Q, Baudin, F, Cusack, S, Schoehn, G, Malet, H.
Deposit date:2021-06-06
Release date:2022-02-16
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural snapshots of La Crosse virus polymerase reveal the mechanisms underlying Peribunyaviridae replication and transcription.
Nat Commun, 13, 2022
7ORK
DownloadVisualize
BU of 7ork by Molmil
La Crosse virus polymerase in transcription mode with cleaved capped RNA entering the polymerase active site
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, RNA (5'-D(*(GTG))-R(P*A)-3'), ...
Authors:Arragain, B, Durieux Trouilleton, Q, Baudin, F, Cusack, S, Schoehn, G, Malet, H.
Deposit date:2021-06-06
Release date:2022-02-16
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural snapshots of La Crosse virus polymerase reveal the mechanisms underlying Peribunyaviridae replication and transcription.
Nat Commun, 13, 2022
7ORO
DownloadVisualize
BU of 7oro by Molmil
La Crosse virus polymerase at replication early-elongation stage
Descriptor: La Crosse virus polymerase, MAGNESIUM ION, RNA (5'-R(P*AP*CP*GP*AP*GP*UP*GP*UP*CP*GP*UP*AP*CP*C)-3'), ...
Authors:Arragain, B, Durieux Trouilleton, Q, Baudin, F, Cusack, S, Schoehn, G, Malet, H.
Deposit date:2021-06-06
Release date:2022-02-16
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural snapshots of La Crosse virus polymerase reveal the mechanisms underlying Peribunyaviridae replication and transcription.
Nat Commun, 13, 2022
7RLA
DownloadVisualize
BU of 7rla by Molmil
Cryo-EM structure of human p97-R191Q mutant bound to ATPgS.
Descriptor: MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Transitional endoplasmic reticulum ATPase
Authors:Caffrey, B, Zhu, X, Berezuk, A, Tuttle, K, Chittori, S, Subramaniam, S.
Deposit date:2021-07-23
Release date:2021-09-22
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:AAA+ ATPase p97/VCP mutants and inhibitor binding disrupt inter-domain coupling and subsequent allosteric activation.
J.Biol.Chem., 297, 2021

224004

数据于2024-08-21公开中

PDB statisticsPDBj update infoContact PDBjnumon