Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6TYX
DownloadVisualize
BU of 6tyx by Molmil
Structure of Ku80 von Willebrand domain S229A mutant complexed with XLF Ku Binding Motif
Descriptor: LYS-GLY-LEU-PHE-MET, X-ray repair cross-complementing protein 5
Authors:Min, J, Pedersen, L.C.
Deposit date:2019-08-09
Release date:2019-11-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.89944351 Å)
Cite:Ligand binding characteristics of the Ku80 von Willebrand domain.
DNA Repair (Amst.), 85, 2019
6TYU
DownloadVisualize
BU of 6tyu by Molmil
Structure of Ku80 von Willebrand domain complexed with MRI Ku Binding Motif
Descriptor: LYS-THR-ARG-VAL-LEU-PRO-SER-TRP-LEU-THR-ALA, X-ray repair cross-complementing protein 5
Authors:Min, J, Pedersen, L.C.
Deposit date:2019-08-09
Release date:2019-11-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.46862721 Å)
Cite:Ligand binding characteristics of the Ku80 von Willebrand domain.
DNA Repair (Amst.), 85, 2019
6I4N
DownloadVisualize
BU of 6i4n by Molmil
Dodecamer DNA containing the synthetic base pair P-Z in complex with a pyrrole-imidazole polyamide
Descriptor: 3-[3-[[4-[[4-[[4-[[4-[[(2~{R})-2-azaniumyl-4-[[1-methyl-4-[[1-methyl-4-[[1-methyl-4-[(1-methylimidazol-2-yl)carbonylamino]pyrrol-2-yl]carbonylamino]pyrrol-2-yl]carbonylamino]pyrrol-2-yl]carbonylamino]butanoyl]amino]-1-methyl-imidazol-2-yl]carbonylamino]-1-methyl-pyrrol-2-yl]carbonylamino]-1-methyl-pyrrol-2-yl]carbonylamino]-1-methyl-pyrrol-2-yl]carbonylamino]propanoylamino]propyl-dimethyl-azanium, DNA (5'-D(*CP*GP*AP*TP*(DP)P*TP*AP*(DZ)P*AP*TP*CP*G)-3')
Authors:Padroni, G, Parkison, J, Burley, G.A.
Deposit date:2018-11-10
Release date:2019-06-12
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Sequence-Selective Minor Groove Recognition of a DNA Duplex Containing Synthetic Genetic Components.
J.Am.Chem.Soc., 141, 2019
1X9L
DownloadVisualize
BU of 1x9l by Molmil
Solution structure of CuI-DR1885 from Deinococcus Radiodurans
Descriptor: COPPER (I) ION, CuI-DR1885
Authors:Banci, L, Bertini, I, Ciofi-Baffoni, S, Katsari, E, Katsaros, N, Kubicek, K, Structural Proteomics in Europe (SPINE)
Deposit date:2004-08-23
Release date:2004-08-31
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:A copper(I) protein possibly involved in the assembly of CuA center of bacterial cytochrome c oxidase.
Proc.Natl.Acad.Sci.USA, 102, 2005
5WOD
DownloadVisualize
BU of 5wod by Molmil
De Novo Design of Covalently Constrained Meso-size Protein Scaffolds with Unique Tertiary Structures
Descriptor: 38-mer peptide
Authors:Wu, H, Wu, Y, DeGrado, W.F.
Deposit date:2017-08-01
Release date:2017-10-04
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:De novo design of covalently constrained mesosize protein scaffolds with unique tertiary structures.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
6TYT
DownloadVisualize
BU of 6tyt by Molmil
Structure of Ku80 von Willebrand domain S229A mutant complexed with APLF and XLF Ku Binding Motif
Descriptor: ALA-LYS-GLY-LEU-PHE-MET, ARG-LYS-ARG-ILE-LEU-PRO-THR-TRP-MET-LEU-ALA, X-ray repair cross-complementing protein 5
Authors:Min, J, Pedersen, L.C.
Deposit date:2019-08-09
Release date:2019-11-27
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.403488 Å)
Cite:Ligand binding characteristics of the Ku80 von Willebrand domain.
DNA Repair (Amst.), 85, 2019
1XC5
DownloadVisualize
BU of 1xc5 by Molmil
Solution Structure of the SMRT Deacetylase Activation Domain
Descriptor: Nuclear receptor corepressor 2
Authors:Codina, A, Love, J.D, Li, Y, Lazar, M.A, Neuhaus, D, Schwabe, J.W.R.
Deposit date:2004-09-01
Release date:2005-05-03
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structural insights into the interaction and activation of histone deacetylase 3 by nuclear receptor corepressors
Proc.Natl.Acad.Sci.Usa, 102, 2005
6TVM
DownloadVisualize
BU of 6tvm by Molmil
LEDGF/p75 dimer (residues 345-467)
Descriptor: PC4 and SFRS1-interacting protein
Authors:Lux, V, Veverka, V.
Deposit date:2020-01-10
Release date:2020-09-09
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Molecular Mechanism of LEDGF/p75 Dimerization.
Structure, 28, 2020
5WBT
DownloadVisualize
BU of 5wbt by Molmil
Solution Structure and Dynamics of an Ultra-Stable Single-Chain Insulin Analog STUDIES OF AN ENGINEERED MONOMER AND IMPLICATIONS FOR RECEPTOR BINDING
Descriptor: Insulin
Authors:Glidden, M.D, Yang, Y, Wickramasinghe, N.P, Weiss, M.A.
Deposit date:2017-06-29
Release date:2017-11-15
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Solution structure of an ultra-stable single-chain insulin analog connects protein dynamics to a novel mechanism of receptor binding.
J. Biol. Chem., 293, 2018
5WLP
DownloadVisualize
BU of 5wlp by Molmil
Solution structure of the pseudo-receiver domain of Atg32
Descriptor: Autophagy-related protein 32
Authors:Xue, X, Pellegrini, M, Ragusa, M.J.
Deposit date:2017-07-27
Release date:2018-07-04
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:A pseudo-receiver domain in Atg32 is required for mitophagy.
Autophagy, 14, 2018
1ZXF
DownloadVisualize
BU of 1zxf by Molmil
Solution structure of a self-sacrificing resistance protein, CalC from Micromonospora echinospora
Descriptor: CalC
Authors:Singh, S, Hager, M.H, Zhang, C, Griffith, B.R, Lee, M.S, Hallenga, K, Markley, J.L, Thorson, J.S, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2005-06-08
Release date:2005-12-13
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural insight into the self-sacrifice mechanism of enediyne resistance.
Acs Chem.Biol., 1, 2006
6IMG
DownloadVisualize
BU of 6img by Molmil
Solution Structure of Bicyclic Peptide pb-13
Descriptor: (ACE)-GLY-CYS-PRO-CYS-ILE-TRP-PRO-GLU-LEU-CYS-PRO-TRP-ILE-ARG-SER-CYS-(NH2)
Authors:Yao, H, Lin, P, Zha, J, Zha, M, Zhao, Y, Wu, C.
Deposit date:2018-10-22
Release date:2019-08-28
Method:SOLUTION NMR
Cite:Ordered and Isomerically Stable Bicyclic Peptide Scaffolds Constrained through Cystine Bridges and Proline Turns.
Chembiochem, 20, 2019
1Z6V
DownloadVisualize
BU of 1z6v by Molmil
Human lactoferricin
Descriptor: Lactotransferrin
Authors:Hunter, H.N, Demcoe, A.R, Jenssen, H, Gutteberg, T.J, Vogel, H.J.
Deposit date:2005-03-23
Release date:2005-08-16
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Human lactoferricin is partially folded in aqueous solution and is better stabilized in a membrane mimetic solvent
ANTIMICROB.AGENTS CHEMOTHER., 49, 2005
1ZHC
DownloadVisualize
BU of 1zhc by Molmil
Solution structure of HP1242 from Helicobacter pylori
Descriptor: hypothetical protein HP1242
Authors:Kang, S.J, Park, S.J, Jung, S.J, Lee, B.J.
Deposit date:2005-04-25
Release date:2005-12-06
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure of HP1242 from Helicobacter pylori
Proteins, 61, 2005
6IB6
DownloadVisualize
BU of 6ib6 by Molmil
Solution structure of the water-soluble LU-domain of human Lypd6 protein
Descriptor: Ly6/PLAUR domain-containing protein 6
Authors:Tsarev, A.V, Kulbatskii, D.S, Paramonov, A.S, Lyukmanova, E.N, Shenkarev, Z.O.
Deposit date:2018-11-29
Release date:2019-12-18
Last modified:2021-01-13
Method:SOLUTION NMR
Cite:Structural Diversity and Dynamics of Human Three-Finger Proteins Acting on Nicotinic Acetylcholine Receptors.
Int J Mol Sci, 21, 2020
6IMH
DownloadVisualize
BU of 6imh by Molmil
Solution Structure of Bicyclic Peptide pb-18
Descriptor: (ACE)-GLY-CYS-PRO-CYS-GLU-PRO-SER-TYR-LEU-CYS-PRO-TRP-LEU-PRO-GLY-CYS-(NH2)
Authors:Yao, H, Lin, P, Zha, J, Zha, M, Zhao, Y, Wu, C.
Deposit date:2018-10-22
Release date:2019-08-28
Method:SOLUTION NMR
Cite:Ordered and Isomerically Stable Bicyclic Peptide Scaffolds Constrained through Cystine Bridges and Proline Turns.
Chembiochem, 20, 2019
6GVQ
DownloadVisualize
BU of 6gvq by Molmil
DNA-bound pRN1 helix bundle domain with ATP and magnesium in the interaction buffer
Descriptor: DNA (5'-D(*CP*TP*GP*TP*GP*CP*TP*CP*A)-3'), functional pRN1 primase
Authors:Boudet, J, Lipps, G, Allain, F.H.-T.
Deposit date:2018-06-21
Release date:2018-12-26
Last modified:2024-07-03
Method:SOLUTION NMR
Cite:A Small Helical Bundle Prepares Primer Synthesis by Binding Two Nucleotides that Enhance Sequence-Specific Recognition of the DNA Template.
Cell, 176, 2019
6GV7
DownloadVisualize
BU of 6gv7 by Molmil
Cadmium(II) form of A44H mutant of shortened metallothionein from Pseudomonas fluorescens Q2-87 (residues 1-52)
Descriptor: CADMIUM ION, metallothionein
Authors:Habjanic, J, Zerbe, O, Freisinger, E.
Deposit date:2018-06-20
Release date:2018-09-19
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:A histidine-rich Pseudomonas metallothionein with a disordered tail displays higher binding capacity for cadmium than zinc.
Metallomics, 10, 2018
6TVJ
DownloadVisualize
BU of 6tvj by Molmil
Solution structure of PD-i3 peptide inhibitor of the human PD-1 extracellular domain
Descriptor: PD-i3 peptide
Authors:Guardiola, S, Varese, M, Garcia, J, Giralt, E.
Deposit date:2020-01-09
Release date:2021-01-27
Last modified:2024-10-16
Method:SOLUTION NMR
Cite:Target-templated de novo design of macrocyclic d-/l-peptides: discovery of drug-like inhibitors of PD-1.
Chem Sci, 12, 2021
6UCP
DownloadVisualize
BU of 6ucp by Molmil
Zinc finger 2 from the transcription factor Sp1 DNA binding domain
Descriptor: Transcription factor Sp1, ZINC ION
Authors:Rao, S.R, Horne, W.S.
Deposit date:2019-09-17
Release date:2020-06-24
Last modified:2024-10-16
Method:SOLUTION NMR
Cite:Proteomimetic Zinc Finger Domains with Modified Metal-binding beta-Turns.
Pept Sci (Hoboken), 112, 2020
5YMY
DownloadVisualize
BU of 5ymy by Molmil
The structure of the complex between Rpn13 and K48-diUb
Descriptor: Proteasomal ubiquitin receptor ADRM1, Ubiquitin
Authors:Liu, Z, Dong, X, Gong, Z, Yi, H.W, Liu, K, Yang, J, Zhang, W.P, Tang, C.
Deposit date:2017-10-22
Release date:2019-03-13
Last modified:2019-04-24
Method:SOLUTION NMR
Cite:Structural basis for the recognition of K48-linked Ub chain by proteasomal receptor Rpn13.
Cell Discov, 5, 2019
1YIU
DownloadVisualize
BU of 1yiu by Molmil
Itch E3 ubiquitin ligase WW3 domain
Descriptor: Itchy E3 ubiquitin protein ligase
Authors:Shaw, A.Z, Martin-Malpartida, P, Morales, B, Yraola, F, Royo, M, Macias, M.J.
Deposit date:2005-01-13
Release date:2005-08-02
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Phosphorylation of either Ser16 or Thr30 does not disrupt the structure of the Itch E3 ubiquitin ligase third WW domain
Proteins, 60, 2005
6V4T
DownloadVisualize
BU of 6v4t by Molmil
MPER-TMD of HIV-1 Env bound with the entry inhibitor S2C3
Descriptor: 4,4'-(decane-1,10-diyl)bis(9-amino-2,3-dihydro-1H-cyclopenta[b]quinolin-4-ium), Envelope glycoprotein gp160
Authors:Xiao, T, Frey, G, Fu, Q, Lavine, C.L, Scott, D.A, Seaman, M.S, Chou, J.J, Chen, B.
Deposit date:2019-11-30
Release date:2020-04-01
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:HIV-1 fusion inhibitors targeting the membrane-proximal external region of Env spikes.
Nat.Chem.Biol., 16, 2020
6I4O
DownloadVisualize
BU of 6i4o by Molmil
Dodecamer DNA containing the synthetic base pair P-Z
Descriptor: (DCZ)(DG)(DA)(DT)(DP)(DT)(DA)(DZ)(DA)(DT)(DC)(DG3)
Authors:Padroni, G, Reichenbach, L.F, Parkinson, J.A, Burley, G.A.
Deposit date:2018-11-10
Release date:2019-06-12
Last modified:2024-07-03
Method:SOLUTION NMR
Cite:Sequence-Selective Minor Groove Recognition of a DNA Duplex Containing Synthetic Genetic Components.
J.Am.Chem.Soc., 141, 2019
6IJQ
DownloadVisualize
BU of 6ijq by Molmil
Solution structure of BCL-XL bound to P73-TAD peptide
Descriptor: Bcl-2-like protein 1,Bcl-2-like protein 1, Tumor protein p73
Authors:Yoon, M.-K, Ha, J.-H, Lee, M.-S, Chi, S.-W.
Deposit date:2018-10-11
Release date:2018-11-21
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Cytoplasmic pro-apoptotic function of the tumor suppressor p73 is mediated through a modified mode of recognition of the anti-apoptotic regulator Bcl-XL.
J. Biol. Chem., 293, 2018

226262

数据于2024-10-16公开中

PDB statisticsPDBj update infoContact PDBjnumon