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8E3S
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BU of 8e3s by Molmil
CryoEM structure of yeast Arginyltransferase 1 (ATE1)
Descriptor: Arginyl-tRNA--protein transferase 1, ZINC ION
Authors:Huang, W, Zhang, Y, Taylor, D.J.
Deposit date:2022-08-17
Release date:2023-04-26
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:The structural basis of tRNA recognition by arginyl-tRNA-protein transferase.
Nat Commun, 14, 2023
1YFR
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BU of 1yfr by Molmil
crystal structure of alanyl-tRNA synthetase in complex with ATP and magnesium
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Alanyl-tRNA synthetase, MAGNESIUM ION
Authors:Swairjo, M.A, Schimmel, P.R.
Deposit date:2005-01-03
Release date:2005-01-25
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Breaking sieve for steric exclusion of a noncognate amino acid from active site of a tRNA synthetase.
Proc.Natl.Acad.Sci.USA, 102, 2005
1YFS
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BU of 1yfs by Molmil
The crystal structure of alanyl-tRNA synthetase in complex with L-alanine
Descriptor: ALANINE, Alanyl-tRNA synthetase
Authors:Swairjo, M.A, Schimmel, P.R.
Deposit date:2005-01-03
Release date:2005-01-25
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Breaking sieve for steric exclusion of a noncognate amino acid from active site of a tRNA synthetase.
Proc.Natl.Acad.Sci.USA, 102, 2005
4J75
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BU of 4j75 by Molmil
Crystal Structure of a parasite tRNA synthetase, product-bound
Descriptor: GLYCEROL, TRYPTOPHANYL-5'AMP, Tryptophanyl-tRNA synthetase
Authors:Koh, C.Y, Kim, J.E, Verlinde, C.L.M.J, Hol, W.G.J.
Deposit date:2013-02-12
Release date:2013-05-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structures of Plasmodium falciparum cytosolic tryptophanyl-tRNA synthetase and its potential as a target for structure-guided drug design.
Mol.Biochem.Parasitol., 189, 2013
1WN2
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BU of 1wn2 by Molmil
Crystal structure of project ID PH1539 from Pyrococcus horikoshii OT3
Descriptor: Peptidyl-tRNA hydrolase, SODIUM ION
Authors:Shimizu, K, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-07-26
Release date:2005-07-19
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structure of peptidyl-tRNA hydrolase 2 from Pyrococcus horikoshii OT3: insight into the functional role of its dimeric state.
Acta Crystallogr.,Sect.D, 64, 2008
4J76
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BU of 4j76 by Molmil
Crystal Structure of a parasite tRNA synthetase, ligand-free
Descriptor: GLYCEROL, Tryptophanyl-tRNA synthetase
Authors:Koh, C.Y, Kim, J.E, Verlinde, C.L.M.J, Hol, W.G.J.
Deposit date:2013-02-12
Release date:2013-05-22
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Crystal structures of Plasmodium falciparum cytosolic tryptophanyl-tRNA synthetase and its potential as a target for structure-guided drug design.
Mol.Biochem.Parasitol., 189, 2013
2LFJ
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BU of 2lfj by Molmil
Solution structure of the monomeric derivative of BS-RNase
Descriptor: Seminal ribonuclease
Authors:Spadaccini, R, Picone, D.
Deposit date:2011-07-06
Release date:2012-02-08
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:NMR Studies on Structure and Dynamics of the Monomeric Derivative of BS-RNase: New Insights for 3D Domain Swapping.
Plos One, 7, 2012
6SSN
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BU of 6ssn by Molmil
RNASE 3/1 version3
Descriptor: GLYCEROL, PHOSPHATE ION, RNase 3/1 version3
Authors:Fernandez-Millan, P, Prats-Ejarque, G, Vazquez-Monteagudo, S, Boix, E.
Deposit date:2019-09-08
Release date:2021-10-06
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.511 Å)
Cite:Exploring the RNase A scaffold to combine catalytic and antimicrobial activities. Structural characterization of RNase 3/1 chimeras.
Front Mol Biosci, 9, 2022
5THH
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BU of 5thh by Molmil
Crystal structure of a human tyrosyl-tRNA synthetase mutant
Descriptor: TYROSINE, Tyrosine--tRNA ligase, cytoplasmic
Authors:Blocquel, D, Yang, X.L.
Deposit date:2016-09-29
Release date:2017-05-17
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.959 Å)
Cite:Alternative stable conformation capable of protein misinteraction links tRNA synthetase to peripheral neuropathy.
Nucleic Acids Res., 45, 2017
1VTQ
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BU of 1vtq by Molmil
THREE-DIMENSIONAL STRUCTURE OF YEAST T-RNA-ASP. I. STRUCTURE DETERMINATION
Descriptor: T-RNA-ASP
Authors:Comarmond, M.B, Giege, R, Thierry, J.C, Moras, D, Fischer, J.
Deposit date:1985-06-11
Release date:2011-07-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3 Å)
Cite:Three-Dimensional Structure of Yeast T-RNA-ASP. I. Structure Determination
Acta Crystallogr.,Sect.B, 42, 1986
1KVZ
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BU of 1kvz by Molmil
Solution Structure of Cytotoxic RC-RNase4
Descriptor: RC-RNase4
Authors:Hsu, C.-H, Liao, Y.-D, Chen, L.-W, Wu, S.-H, Chen, C.
Deposit date:2002-01-28
Release date:2002-07-28
Last modified:2024-10-23
Method:SOLUTION NMR
Cite:Solution Structure of the Cytotoxic RNase 4 from the Oocytes of Bullfrog Rana Catesbeiana
J.MOL.BIOL., 326, 2003
4AUD
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BU of 4aud by Molmil
Crystal structure of alternaria alternata major allergen alt a 1
Descriptor: MAJOR ALLERGEN ALT A 1 SUBUNIT, SULFATE ION
Authors:Mechaly, A.E, Ibanez de Opakua, A, Asturias, J, Viguera, A.R.
Deposit date:2012-05-16
Release date:2013-05-29
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.67 Å)
Cite:Crystal Structure of Major Allergen of Alternaria Alternata Alt a 1
To be Published
4V8Z
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BU of 4v8z by Molmil
Cryo-EM reconstruction of the 80S-eIF5B-Met-itRNAMet Eukaryotic Translation Initiation Complex
Descriptor: 18S RIBOSOMAL RNA, 25S RIBOSOMAL RNA, 40S RIBOSOMAL PROTEIN S0-A, ...
Authors:Fernandez, I.S, Bai, X.C, Hussain, T, Kelley, A.C, Lorsch, J.R, Ramakrishnan, V, Scheres, S.H.W.
Deposit date:2013-07-20
Release date:2014-07-09
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (6.6 Å)
Cite:Molecular architecture of a eukaryotic translational initiation complex.
Science, 342, 2013
6TPQ
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BU of 6tpq by Molmil
RNase M5 bound to 50S ribosome with precursor 5S rRNA
Descriptor: 50S ribosomal protein L10, 50S ribosomal protein L13, 50S ribosomal protein L14, ...
Authors:Oerum, S, Dendooven, T, Gilet, L, Catala, M, Degut, C, Trinquier, A, Barraud, P, Luisi, B, Condon, C, Tisne, C.
Deposit date:2019-12-13
Release date:2020-09-30
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.07 Å)
Cite:Structures of B. subtilis Maturation RNases Captured on 50S Ribosome with Pre-rRNAs.
Mol.Cell, 80, 2020
7RQ5
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BU of 7rq5 by Molmil
Hairpin near 3'-Splice Site of Influenza A Segment 7 Bound to 5-nt Oligonucleotide
Descriptor: RNA (5'-D(*(MU5)P*(MLC)P*(MRC))-R(P*(LG)P*(MU3))-3'), RNA (5'-R(*AP*UP*CP*CP*AP*GP*AP*AP*AP*CP*GP*GP*AP*UP*GP*GP*AP*UP*A)-3')
Authors:Kauffmann, A.D, Kennedy, S.D, Turner, D.H.
Deposit date:2021-08-05
Release date:2022-01-19
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Nuclear magnetic resonance reveals a two hairpin equilibrium near the 3'-splice site of influenza A segment 7 mRNA that can be shifted by oligonucleotides.
Rna, 28, 2022
9MDS
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BU of 9mds by Molmil
ROOL RNA nanocage (env-120)
Descriptor: RNA (598-MER)
Authors:Kretsch, R.C, Wu, Y, Das, R, Chiu, W.
Deposit date:2024-12-05
Release date:2025-04-30
Last modified:2025-05-21
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Naturally ornate RNA-only complexes revealed by cryo-EM.
Nature, 2025
9LPC
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BU of 9lpc by Molmil
Crystal structure of Escherichia coli trptophanyl-tRNA synthetase in complex with tRNA(Trp)
Descriptor: Tryptophan--tRNA ligase, tRNA(Trp)
Authors:Peng, X, Chen, B, Zhou, H.
Deposit date:2025-01-24
Release date:2025-05-07
Method:X-RAY DIFFRACTION (2.82 Å)
Cite:The lineage-specific tRNA recognition mechanism of bacterial trptophanyl-tRNA synthetase and its implications for inhibitor discover
To Be Published
6LSP
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BU of 6lsp by Molmil
Crystal structure of a dimeric Piptidyl t-RNA hydrolase from Acinetobacter baumannii at 1.50 A resolution reveals an inhibited form.
Descriptor: Peptidyl-tRNA hydrolase
Authors:Viswanathan, V, Ahmad, M.I, Sharma, P, Sharma, S, Singh, T.P.
Deposit date:2020-01-18
Release date:2020-02-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of a dimeric Piptidyl t-RNA hydrolase from Acinetobacter baumannii at 1.50 A resolution reveals on inhibited form.
To Be Published
9ENF
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BU of 9enf by Molmil
Human pseudouridine synthase 3 (PUS3 D118A mutant) and two pre-tRNA-Arg
Descriptor: pre-tRNA-Arg, tRNA pseudouridine(38/39) synthase
Authors:Lin, T.-Y, Jezowski, J, Glatt, S.
Deposit date:2024-03-12
Release date:2024-07-10
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (2.97 Å)
Cite:The molecular basis of tRNA selectivity by human pseudouridine synthase 3.
Mol.Cell, 84, 2024
5M3F
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BU of 5m3f by Molmil
Yeast RNA polymerase I elongation complex at 3.8A
Descriptor: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ...
Authors:Neyer, S, Kunz, M, Geiss, C, Hantsche, M, Hodirnau, V.-V, Seybert, A, Engel, C, Scheffer, M.P, Cramer, P, Frangakis, A.S.
Deposit date:2016-10-14
Release date:2016-11-23
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure of RNA polymerase I transcribing ribosomal DNA genes.
Nature, 540, 2016
1QZC
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BU of 1qzc by Molmil
Coordinates of S12, SH44, LH69 and SRL separately fitted into the cryo-EM map of EF-Tu ternary complex (GDP.Kirromycin) bound 70S ribosome
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S12
Authors:Valle, M, Zavialov, A, Li, W, Stagg, S.M, Sengupta, J, Nielsen, R.C, Nissen, P, Harvey, S.C, Ehrenberg, M, Frank, J.
Deposit date:2003-09-16
Release date:2003-11-04
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (9 Å)
Cite:Incorporation of Aminoacyl-tRNA into the Ribosome as seen by Cryo-electron Microscopy
Nat.Struct.Biol., 10, 2003
1R2X
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BU of 1r2x by Molmil
Coordinates of L11 with 58nts of 23S rRNA fitted into the cryo-EM map of EF-Tu ternary complex (GDP.Kirromycin) bound 70S ribosome
Descriptor: 50S ribosomal protein L11, 58nts of 23S rRNA
Authors:Valle, M, Zavialov, A, Li, W, Stagg, S.M, Sengupta, J, Nielsen, R.C, Nissen, P, Harvey, S.C, Ehrenberg, M, Frank, J.
Deposit date:2003-09-30
Release date:2003-11-04
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (9 Å)
Cite:Incorporation of aminoacyl-tRNA into the ribosome as seen by cryo-electron Microscopy
Nat.Struct.Biol., 10, 2003
1R2W
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BU of 1r2w by Molmil
Coordinates of L11 with 58nts of 23S rRNA fitted into the cryo-EM map of the 70S ribosome
Descriptor: 50S ribosomal protein L11, 58nts of 23S rRNA
Authors:Valle, M, Zavialov, A, Li, W, Stagg, S.M, Sengupta, J, Nielsen, R.C, Nissen, P, Harvey, S.C, Ehrenberg, M, Frank, J.
Deposit date:2003-09-30
Release date:2003-11-04
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (9 Å)
Cite:Incorporation of aminoacyl-tRNA into the ribosome as seen by cryo-electron Microscopy
Nat.Struct.Biol., 10, 2003
8G9Z
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BU of 8g9z by Molmil
High-resolution crystal structure of the human selenomethionine-derived SepSecS-tRNASec complex
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, (5-HYDROXY-4,6-DIMETHYLPYRIDIN-3-YL)METHYL DIHYDROGEN PHOSPHATE, O-phosphoseryl-tRNA(Sec) selenium transferase, ...
Authors:Puppala, A, Simonovic, M, Castillo Suchkou, J.
Deposit date:2023-02-22
Release date:2023-04-05
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Structural basis for the tRNA-dependent activation of the terminal complex of selenocysteine synthesis in humans.
Nucleic Acids Res., 51, 2023
8OPP
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BU of 8opp by Molmil
Structure of human terminal uridylyltransferase 7 (hTUT7/ZCCHC6) bound with pre-let7g miRNA and UTPalphaS
Descriptor: RNA (25-MER), Terminal uridylyltransferase 7, [[(2~{R},3~{S},4~{R},5~{R})-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-sulfanyl-phosphoryl] phosphono hydrogen phosphate
Authors:Yi, G, Ye, M, Gilbert, R.J.
Deposit date:2023-04-07
Release date:2024-07-24
Last modified:2025-07-09
Method:ELECTRON MICROSCOPY (3.76 Å)
Cite:Structural basis for activity switching in polymerases determining the fate of let-7 pre-miRNAs.
Nat.Struct.Mol.Biol., 31, 2024

238582

数据于2025-07-09公开中

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