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2O0I
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crystal structure of the R185A mutant of the N-terminal domain of the Group B Streptococcus Alpha C protein
Descriptor: C protein alpha-antigen
Authors:Hogle, J.M, Filman, D.J, Baron, M.J, Madoff, L.C, Iglesias, A.
Deposit date:2006-11-27
Release date:2007-02-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Identification of a glycosaminoglycan binding region of the alpha C protein that mediates entry of group B streptococci into host cells.
J.Biol.Chem., 282, 2007
1AB2
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BU of 1ab2 by Molmil
THREE-DIMENSIONAL SOLUTION STRUCTURE OF THE SRC HOMOLOGY 2 DOMAIN OF C-ABL
Descriptor: C-ABL TYROSINE KINASE SH2 DOMAIN
Authors:Overduin, M, Rios, C.B, Mayer, B.J, Baltimore, D, Cowburn, D.
Deposit date:1993-07-19
Release date:1994-01-31
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Three-dimensional solution structure of the src homology 2 domain of c-abl.
Cell(Cambridge,Mass.), 70, 1992
1W3C
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BU of 1w3c by Molmil
Crystal structure of the Hepatitis C Virus NS3 Protease in complex with a peptidomimetic inhibitor
Descriptor: 3-({(2S)-2-[({(1R)-1-[({(1R)-1-[(R)-CARBOXY(HYDROXY)METHYL]-3,3-DIFLUOROPROPYL}AMINO)CARBONYL]-3-METHYLBUTYL}AMINO)CARB ONYL]-2,3-DIHYDRO-1H-INDOL-2-YL}METHYL)THIOPHENE-2-CARBOXYLIC ACID, 3-({(2S)-2-[({(1S)-1-[({(1S)-1-[(R)-CARBOXY(HYDROXY)METHYL]-3,3-DIFLUOROPROPYL}AMINO)CARBONYL]-3-METHYLBUTYL}AMINO)CARBONYL]-2,3-DIHYDRO-1H-INDOL-2-YL}METHYL)THIOPHENE-2-CARBOXYLIC ACID, NONSTRUCTURAL PROTEIN NS4A (P4), ...
Authors:Di Marco, S, Volpari, C.
Deposit date:2004-07-14
Release date:2004-12-09
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The Design and Enzyme-Bound Crystal Structure of Indoline Based Peptidomimetic Inhibitors of Hepatitis C Virus Ns3 Protease
J.Med.Chem., 47, 2004
1E85
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BU of 1e85 by Molmil
Cytochrome c' from Alcaligenes xylosoxidans - reduced structure with NO bound to proximal side of heme
Descriptor: CYTOCHROME C', HEME C, NITRIC OXIDE
Authors:Lawson, D.M, Stevenson, C.E.M, Andrew, C.R, Eady, R.R.
Deposit date:2000-09-15
Release date:2000-11-06
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Unprecedented Proximal Binding of Nitric Oxide to Heme: Implications for Guanylate Cyclase.
Embo J., 19, 2000
1EW3
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BU of 1ew3 by Molmil
CRYSTAL STRUCTURE OF THE MAJOR HORSE ALLERGEN EQU C 1
Descriptor: ALLERGEN EQU C 1
Authors:Lascombe, M.B, Gregoire, C, Poncet, P, Tavares, G.A, Rosinski-Chupin, I, Rabillon, J, Goubran-Botros, H, Mazie, J.C, David, B, Alzari, P.M.
Deposit date:2000-04-21
Release date:2000-05-03
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the allergen Equ c 1. A dimeric lipocalin with restricted IgE-reactive epitopes.
J.Biol.Chem., 275, 2000
1EB7
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BU of 1eb7 by Molmil
Crystal structure of the di-haem cytochrome c peroxidase from Pseudomonas aeruginosa
Descriptor: CALCIUM ION, CYTOCHROME C551 PEROXIDASE, HEME C
Authors:Fulop, V.
Deposit date:2001-07-24
Release date:2001-07-24
Last modified:2025-04-09
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of the Di-Haemcytochrome C Peroxidase from Pseudomonas Aeruginosa
Structure, 3, 1995
7B3Q
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BU of 7b3q by Molmil
Crystal structure of c-MET bound by compound 1
Descriptor: 1-(phenylmethyl)-5~{H}-pyrrolo[3,2-c]pyridin-4-one, Hepatocyte growth factor receptor, SULFATE ION
Authors:Collie, G.W.
Deposit date:2020-12-01
Release date:2020-12-09
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural Basis for Targeting the Folded P-Loop Conformation of c-MET.
Acs Med.Chem.Lett., 12, 2021
7S9Y
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BU of 7s9y by Molmil
Helicobacter Hepaticus CcsBA Open Conformation
Descriptor: Cytochrome c biogenesis protein, HEME B/C, PHOSPHATIDYLETHANOLAMINE
Authors:Mendez, D.L, Lowder, E.P, Tillman, D.E, Sutherland, M.C, Collier, A.L, Rau, M.J, Fitzpatrick, J.A, Kranz, R.G.
Deposit date:2021-09-21
Release date:2021-12-22
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (3.56 Å)
Cite:Cryo-EM of CcsBA reveals the basis for cytochrome c biogenesis and heme transport.
Nat.Chem.Biol., 18, 2022
7S9Z
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BU of 7s9z by Molmil
Helicobacter Hepaticus CcsBA Closed Conformation
Descriptor: Cytochrome c biogenesis protein, HEME B/C, PHOSPHATIDYLETHANOLAMINE
Authors:Mendez, D.L, Lowder, E.P, Tillman, D.E, Sutherland, M.C, Collier, A.L, Rau, M.J, Fitzpatrick, J.A, Kranz, R.G.
Deposit date:2021-09-21
Release date:2021-12-22
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (4.14 Å)
Cite:Cryo-EM of CcsBA reveals the basis for cytochrome c biogenesis and heme transport.
Nat.Chem.Biol., 18, 2022
3F6U
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BU of 3f6u by Molmil
Crystal structure of human Activated Protein C (APC) complexed with PPACK
Descriptor: CALCIUM ION, D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide, SODIUM ION, ...
Authors:Schmidt, A.E, Padmanabhan, K, Underwood, M.C, Bode, W, Mather, T, Bajaj, S.P.
Deposit date:2008-11-06
Release date:2008-11-25
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Thermodynamic linkage between the S1 site, the Na+ site, and the Ca2+ site in the protease domain of human activated protein C (APC).
J.Biol.Chem., 277, 2002
8POO
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BU of 8poo by Molmil
Low resolution structure of inactive conformation of the Ktr cation channel in presence of ATP and c-di-AMP
Descriptor: Ktr system potassium uptake protein A, Ktr system potassium uptake protein B
Authors:Cereija, T.B, Teixeira-Duarte, C.M, Morais-Cabral, J.H.
Deposit date:2023-07-05
Release date:2024-05-15
Method:X-RAY DIFFRACTION (5.77 Å)
Cite:c-di-AMP determines the hierarchical organization of bacterial RCK proteins.
Proc.Natl.Acad.Sci.USA, 121, 2024
1MK8
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BU of 1mk8 by Molmil
Crystal Structure of a Mutant Cytochrome c Peroxidase showing a Novel Trp-Tyr Covalent Cross-link
Descriptor: Cytochrome c Peroxidase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Bhaskar, B, Immoos, C.E, Shimizu, H, Farmer, P.J, Poulos, T.L.
Deposit date:2002-08-28
Release date:2003-04-08
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:A Novel Heme and Peroxide-Dependent Tryptophan-Tyrosine Cross-Link in a Mutant of Cytochrome c Peroxidase
J.Mol.Biol., 328, 2003
1MEE
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BU of 1mee by Molmil
THE COMPLEX BETWEEN THE SUBTILISIN FROM A MESOPHILIC BACTERIUM AND THE LEECH INHIBITOR EGLIN-C
Descriptor: CALCIUM ION, EGLIN C, MESENTERICOPEPTIDASE
Authors:Dauter, Z, Betzel, C, Wilson, K.S.
Deposit date:1991-04-15
Release date:1992-10-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Complex between the subtilisin from a mesophilic bacterium and the leech inhibitor eglin-C.
Acta Crystallogr.,Sect.B, 47, 1991
1MKQ
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BU of 1mkq by Molmil
Crystal Structure of the Mutant Variant of Cytochrome c Peroxidase in the 'Open' Uncross-linked form
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Cytochrome c Peroxidase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Bhaskar, B, Immoos, C.E, Shimizu, H, Farmer, P.J, Poulos, T.L.
Deposit date:2002-08-29
Release date:2003-04-08
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:A Novel Heme and Peroxide-Dependent Tryptophan-Tyrosine Cross-Link in a Mutant of Cytochrome c Peroxidase
J.Mol.Biol., 328, 2003
4XXL
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BU of 4xxl by Molmil
Crystal structure of Class 1 cytochrome MtoD from Sideroxydans lithotrophicus ES-1
Descriptor: Cytochrome c class I, HEME C
Authors:Beckwith, C.R, Edwards, M.J, Clarke, T.
Deposit date:2015-01-30
Release date:2015-04-15
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Characterization of MtoD from Sideroxydans lithotrophicus: a cytochrome c electron shuttle used in lithoautotrophic growth.
Front Microbiol, 6, 2015
4WJY
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BU of 4wjy by Molmil
Esherichia coli nitrite reductase NrfA H264N
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Cytochrome c-552, ...
Authors:Clarke, T.A, Edwards, M.J, Lockwood, C.W.J.
Deposit date:2014-10-01
Release date:2015-03-11
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Resolution of key roles for the distal pocket histidine in cytochrome C nitrite reductases.
J.Am.Chem.Soc., 137, 2015
8EBN
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BU of 8ebn by Molmil
Structure of KLHDC2-EloB/C tetrameric assembly
Descriptor: Elongin-B, Elongin-C, Kelch domain-containing protein 2
Authors:Scott, D.C, Schulman, B.A.
Deposit date:2022-08-31
Release date:2023-02-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:E3 ligase autoinhibition by C-degron mimicry maintains C-degron substrate fidelity.
Mol.Cell, 83, 2023
6XA2
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BU of 6xa2 by Molmil
Structure of the tirandamycin C-bound P450 monooxygenase TamI
Descriptor: (3E)-3-{(2E,4E,6R)-1-hydroxy-4-methyl-6-[(1R,3R,4S,5R)-1,4,8-trimethyl-2,9-dioxabicyclo[3.3.1]non-7-en-3-yl]hepta-2,4-dien-1-ylidene}-2H-pyrrole-2,4(3H)-dione, PROTOPORPHYRIN IX CONTAINING FE, TamI
Authors:Newmister, S.A, Srivastava, K.R, Espinoza, R.V, Haatveit, K.C, Khatri, Y, Martini, R.M, Garcia-Borras, M, Podust, L.M, Houk, K.N, Sherman, D.H.
Deposit date:2020-06-03
Release date:2021-06-09
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:Molecular Basis of Iterative C─H Oxidation by TamI, a Multifunctional P450 monooxygenase from the Tirandamycin Biosynthetic Pathway.
Acs Catalysis, 10, 2020
5WBN
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BU of 5wbn by Molmil
Crystal structure of fragment 3-(3-Benzyl-2-oxo-2H-[1,2,4]triazino[2,3-c]quinazolin-6-yl)propanoic acid bound in the ubiquitin binding pocket of the HDAC6 zinc-finger domain
Descriptor: 3-(3-benzyl-2-oxo-2H-[1,2,4]triazino[2,3-c]quinazolin-6-yl)propanoic acid, ACETATE ION, CHLORIDE ION, ...
Authors:Harding, R.J, Walker, J.R, Ferreira de Freitas, R, Ravichandran, M, Santhakumar, V, Schapira, M, Bountra, C, Edwards, A.M, Arrowsmith, C.H.
Deposit date:2017-06-29
Release date:2017-08-02
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Crystal structure of fragment 3-(3-Benzyl-2-oxo-2H-[1,2,4]triazino[2,3-c]quinazolin-6-yl)propanoic acid bound in the ubiquitin binding pocket of the HDAC6 zinc-finger domain
To be published
6YYJ
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BU of 6yyj by Molmil
Crystal structure of native Phycocyanin from T. elongatus in spacegroup P21212 at 2.1 Angstroms
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 3-[5-[[(3~{R},4~{R})-3-ethyl-4-methyl-5-oxidanylidene-3,4-dihydropyrrol-2-yl]methyl]-2-[[5-[(~{Z})-(4-ethyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-3-(3-hydroxy-3-oxopropyl)-4-methyl-1~{H}-pyrrol-2-yl]methyl]-4-methyl-1~{H}-pyrrol-3-yl]propanoic acid, C-phycocyanin alpha chain, ...
Authors:Feiler, C.G, Falke, S, Sarrou, I.
Deposit date:2020-05-05
Release date:2021-01-20
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:C-phycocyanin as a highly attractive model system in protein crystallography: unique crystallization properties and packing-diversity screening.
Acta Crystallogr D Struct Biol, 77, 2021
5Y6G
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BU of 5y6g by Molmil
PilZ domain with c-di-GMP of YcgR from Escherichia coli
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), Flagellar brake protein YcgR, SULFATE ION
Authors:Hou, Y.J, Wang, D.C, Li, D.F.
Deposit date:2017-08-11
Release date:2018-07-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural insights into the mechanism of c-di-GMP-bound YcgR regulating flagellar motility inEscherichia coli.
J.Biol.Chem., 295, 2020
5Y6F
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Crystal structure of YcgR in complex with c-di-GMP from Escherichia coli
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), Flagellar brake protein YcgR, SULFATE ION
Authors:Hou, Y.J, Wang, D.C, Li, D.F.
Deposit date:2017-08-11
Release date:2018-07-18
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural insights into the mechanism of c-di-GMP-bound YcgR regulating flagellar motility inEscherichia coli.
J.Biol.Chem., 295, 2020
5KKE
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BU of 5kke by Molmil
Crystal Structure of a Domain-swapped Dimer of Yeast Iso-1-cytochrome c with CYMAL5
Descriptor: 5-CYCLOHEXYL-1-PENTYL-BETA-D-MALTOSIDE, CHLORIDE ION, Cytochrome c iso-1, ...
Authors:Bowler, B.E, Whitby, F.G.
Deposit date:2016-06-21
Release date:2017-03-22
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.701 Å)
Cite:Cytochrome c Can Form a Well-Defined Binding Pocket for Hydrocarbons.
J. Am. Chem. Soc., 138, 2016
5KLU
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BU of 5klu by Molmil
Crystal Structure of a Domain-swapped Dimer of Yeast Iso-1-cytochrome c with omega-undecylenyl-beta-D-maltopyranoside
Descriptor: Cytochrome c iso-1, HEME C, SULFATE ION, ...
Authors:Bowler, B.E, Whitby, F.G.
Deposit date:2016-06-25
Release date:2017-03-22
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Cytochrome c Can Form a Well-Defined Binding Pocket for Hydrocarbons.
J. Am. Chem. Soc., 138, 2016
9D1I
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BU of 9d1i by Molmil
Structure of Ubiquitin bound to KLHDC3-EloB/C
Descriptor: Elongin-B, Elongin-C, GLYCEROL, ...
Authors:Schulman, B.A, Scott, D.C.
Deposit date:2024-08-07
Release date:2024-11-20
Last modified:2025-02-05
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for C-degron selectivity across KLHDCX family E3 ubiquitin ligases.
Nat Commun, 15, 2024

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数据于2025-07-02公开中

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