Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8QLF
DownloadVisualize
BU of 8qlf by Molmil
Crystal structure of the light-driven sodium pump ErNaR in the monomeric form at pH 8.8
Descriptor: Bacteriorhodopsin-like protein, EICOSANE, OLEIC ACID
Authors:Kovalev, K, Podoliak, E, Lamm, G.H.U, Astashkin, R, Bourenkov, G.
Deposit date:2023-09-19
Release date:2024-04-24
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:A subgroup of light-driven sodium pumps with an additional Schiff base counterion.
Nat Commun, 15, 2024
7ASS
DownloadVisualize
BU of 7ass by Molmil
OXA-48_L67F_CAZ. What Doesnt Kill You Makes You Stronger: Sub-MIC Selection Drives Cryptic Evolution of OXA-48
Descriptor: Beta-lactamase, CHLORIDE ION, hydrolyzed ceftazidime
Authors:Frohlich, C, Leiros, H.-K.S.
Deposit date:2020-10-28
Release date:2020-12-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Cryptic beta-Lactamase Evolution Is Driven by Low beta-Lactam Concentrations.
Msphere, 6, 2021
6W5L
DownloadVisualize
BU of 6w5l by Molmil
2.1 A resolution structure of Norovirus 3CL protease in complex with inhibitor 7g
Descriptor: (2~{S})-~{N}-[(1~{R})-1-[bis($l^{1}-oxidanyl)-methoxy-$l^{5}-sulfanyl]-1-oxidanyl-3-[(3~{R})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]-2-[[[2-(3-chlorophenyl)-2-methyl-propoxy]-oxidanylidene-methyl]amino]-4-methyl-pentanamide, 3C-LIKE PROTEASE
Authors:Lovell, S, Kashipathy, M.M, Battaile, K.P, Rathnayake, A.D, Kim, Y, Chang, K.O, Groutas, W.C.
Deposit date:2020-03-13
Release date:2020-09-30
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure-Guided Optimization of Dipeptidyl Inhibitors of Norovirus 3CL Protease.
J.Med.Chem., 63, 2020
5TR1
DownloadVisualize
BU of 5tr1 by Molmil
Cryo-electron microscopy structure of a bovine CLC-K chloride channel, alternate (class 2) conformation
Descriptor: CHOLESTEROL HEMISUCCINATE, Chloride channel protein, Monoclonal antibody, ...
Authors:Park, E, MacKinnon, R.
Deposit date:2016-10-25
Release date:2017-01-11
Last modified:2019-11-20
Method:ELECTRON MICROSCOPY (3.95 Å)
Cite:Structure of a CLC chloride ion channel by cryo-electron microscopy.
Nature, 541, 2017
6VWC
DownloadVisualize
BU of 6vwc by Molmil
Crystal structure of Bcl-xL in complex with tetrahydroisoquinoline-pyridine based inhibitors
Descriptor: 6-{8-[(1,3-benzothiazol-2-yl)carbamoyl]-3,4-dihydroisoquinolin-2(1H)-yl}-3-{1-[(pyridin-4-yl)methyl]-1H-pyrazol-4-yl}pyridine-2-carboxylic acid, Bcl-2-like protein 1
Authors:Judge, R.A, Judd, A.S.
Deposit date:2020-02-19
Release date:2020-10-21
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.604 Å)
Cite:Discovery of A-1331852, a First-in-Class, Potent, and Orally-Bioavailable BCL-X L Inhibitor.
Acs Med.Chem.Lett., 11, 2020
6VWF
DownloadVisualize
BU of 6vwf by Molmil
Structure of ALDH9A1 complexed with NAD+ in space group C222
Descriptor: 4-trimethylaminobutyraldehyde dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Wyatt, J.W, Tanner, J.J.
Deposit date:2020-02-19
Release date:2020-08-05
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:Inhibition, crystal structures, and in-solution oligomeric structure of aldehyde dehydrogenase 9A1.
Arch.Biochem.Biophys., 691, 2020
6TTL
DownloadVisualize
BU of 6ttl by Molmil
crystal structure of [FeFe]-hydrogenase CbA5H (partial) from Clostridium beijerinckii in Hinact state
Descriptor: IRON/SULFUR CLUSTER, [FeFe]-hydrogenase, dicarbonyl[bis(cyanide-kappaC)]-mu-(iminodimethanethiolatato-1kappaS:2kappaS)-mu-(oxomethylidene)diiron(2+)
Authors:Duan, J, Rutz, A, Hofmann, E, Happe, T.
Deposit date:2019-12-28
Release date:2020-12-09
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:A safety cap protects hydrogenase from oxygen attack.
Nat Commun, 12, 2021
6WKP
DownloadVisualize
BU of 6wkp by Molmil
Crystal structure of RNA-binding domain of nucleocapsid phosphoprotein from SARS CoV-2, monoclinic crystal form
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Nucleoprotein, ZINC ION
Authors:Chang, C, Michalska, K, Jedrzejczak, R, Maltseva, N, Endres, M, Godzik, A, Kim, Y, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2020-04-16
Release date:2020-04-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.67 Å)
Cite:Epitopes recognition of SARS-CoV-2 nucleocapsid RNA binding domain by human monoclonal antibodies.
Iscience, 27, 2024
8AJJ
DownloadVisualize
BU of 8ajj by Molmil
Crystal structure of the disulfide reductase MerA from Staphylococcus aureus
Descriptor: Dihydrolipoamide dehydrogenase, FLAVIN-ADENINE DINUCLEOTIDE, HISTIDINE
Authors:Weiland, P, Altegoer, F, Bange, G.
Deposit date:2022-07-28
Release date:2023-03-01
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:MerA functions as a hypothiocyanous acid reductase and defense mechanism in Staphylococcus aureus.
Mol.Microbiol., 119, 2023
5TQQ
DownloadVisualize
BU of 5tqq by Molmil
Cryo-electron microscopy structure of a bovine CLC-K chloride channel, main (class 1) conformation
Descriptor: Chloride channel protein, Monoclonal antibody, Fab fragment, ...
Authors:Park, E, MacKinnon, R.
Deposit date:2016-10-24
Release date:2017-01-04
Last modified:2019-11-20
Method:ELECTRON MICROSCOPY (3.76 Å)
Cite:Structure of a CLC chloride ion channel by cryo-electron microscopy.
Nature, 541, 2017
7BCB
DownloadVisualize
BU of 7bcb by Molmil
Crystal structure of the HTH DNA binding protein ArdK from R388 plasmid bound to IR3 DNA
Descriptor: DNA (5'-D(*TP*AP*AP*TP*GP*TP*CP*AP*AP*AP*TP*AP*TP*TP*GP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*CP*AP*AP*TP*AP*TP*TP*TP*GP*AP*CP*AP*TP*TP*A)-3'), KORA domain-containing protein
Authors:Fernandez-Lopez, R, Boer, D.R, Moncalian, G.
Deposit date:2020-12-19
Release date:2022-01-12
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis of direct and inverted DNA sequence repeat recognition by helix-turn-helix transcription factors.
Nucleic Acids Res., 50, 2022
5T31
DownloadVisualize
BU of 5t31 by Molmil
Exploiting an Asp-Glu switch in Glycogen Synthase Kinase 3 to design paralog selective inhibitors for use in acute myeloid leukemia
Descriptor: (4~{S})-4-ethyl-7,7-dimethyl-4-phenyl-2,6,8,9-tetrahydropyrazolo[3,4-b]quinolin-5-one, Glycogen synthase kinase-3 beta
Authors:Stein, A.J, Holson, E.B, Wagner, F.F, Cambell, A.J.
Deposit date:2016-08-24
Release date:2018-02-21
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Exploiting an Asp-Glu "switch" in glycogen synthase kinase 3 to design paralog-selective inhibitors for use in acute myeloid leukemia.
Sci Transl Med, 10, 2018
8AJK
DownloadVisualize
BU of 8ajk by Molmil
Crystal structure of a C43S variant from the disulfide reductase MerA from Staphylococcus aureus
Descriptor: FAD-containing oxidoreductase, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ...
Authors:Weiland, P, Altegoer, F, Bange, G.
Deposit date:2022-07-28
Release date:2023-03-01
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:MerA functions as a hypothiocyanous acid reductase and defense mechanism in Staphylococcus aureus.
Mol.Microbiol., 119, 2023
7LGK
DownloadVisualize
BU of 7lgk by Molmil
Crystal structure of soluble guanylate cyclase activator runcaciguat (BAY 1101042) bound to nostoc H-NOX domain
Descriptor: CHLORIDE ION, GLYCEROL, H-NOX domain protein, ...
Authors:van den Akker, F, Kumar, V, Schaefer, M.
Deposit date:2021-01-20
Release date:2021-05-05
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Discovery of the Soluble Guanylate Cyclase Activator Runcaciguat (BAY 1101042).
J.Med.Chem., 64, 2021
7BCA
DownloadVisualize
BU of 7bca by Molmil
Crystal structure of the HTH DNA binding protein ArdK from R388 plasmid bound to a direct-repeat DNA element
Descriptor: DNA (5'-D(*GP*TP*AP*TP*TP*GP*AP*CP*AP*CP*CP*TP*AP*TP*TP*GP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*CP*AP*AP*TP*AP*GP*GP*TP*GP*TP*CP*AP*AP*TP*AP*C)-3'), KORA domain-containing protein
Authors:Fernandez-Lopez, R, Boer, D.R, Moncalian, G.
Deposit date:2020-12-18
Release date:2022-07-13
Last modified:2022-12-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis of direct and inverted DNA sequence repeat recognition by helix-turn-helix transcription factors.
Nucleic Acids Res., 50, 2022
7BBQ
DownloadVisualize
BU of 7bbq by Molmil
Crystal structure of the HTH DNA binding protein ArdK from R388 plasmid. Apo form.
Descriptor: KORA domain-containing protein
Authors:Fernandez-Lopez, R, Boer, D.R, Moncalian, G.
Deposit date:2020-12-18
Release date:2022-07-13
Last modified:2022-12-14
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural basis of direct and inverted DNA sequence repeat recognition by helix-turn-helix transcription factors.
Nucleic Acids Res., 50, 2022
6WOK
DownloadVisualize
BU of 6wok by Molmil
Crystal structure of estrogen receptor alpha in complex with receptor degrader 6
Descriptor: (1R,3R)-1-(2,6-difluoro-4-{2-[3-(fluoromethyl)azetidin-1-yl]ethoxy}phenyl)-2-(2-fluoro-2-methylpropyl)-3-methyl-2,3,4,9-tetrahydro-1H-beta-carboline, (2S)-3-(3-hydroxyphenyl)-2-(4-iodophenyl)-4-methyl-2H-1-benzopyran-6-ol, Estrogen receptor
Authors:Kiefer, J.R, Vinogradova, M, Liang, J, Zhang, B, Wang, X, Labadie, S.
Deposit date:2020-04-24
Release date:2020-07-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.309 Å)
Cite:Discovery of GNE-149 as a Full Antagonist and Efficient Degrader of Estrogen Receptor alpha for ER+ Breast Cancer.
Acs Med.Chem.Lett., 11, 2020
8QXY
DownloadVisualize
BU of 8qxy by Molmil
Xylanase from Bacillus circulans mutant E78Q bound to xylotriose
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Endo-1,4-beta-xylanase, GLYCEROL, ...
Authors:Chikunova, A, Saberi, M, Ubbink, M.
Deposit date:2023-10-25
Release date:2024-08-21
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:Bimodal substrate binding in the active site of the glycosidase BcX.
Febs J., 2024
8QY2
DownloadVisualize
BU of 8qy2 by Molmil
Xylanase from Bacillus circulans mutant E78Q/F125A
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Endo-1,4-beta-xylanase, GLYCEROL, ...
Authors:Chikunova, A, Saberi, M, Ubbink, M.
Deposit date:2023-10-25
Release date:2024-08-21
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Bimodal substrate binding in the active site of the glycosidase BcX.
Febs J., 2024
8R86
DownloadVisualize
BU of 8r86 by Molmil
Xylanase from Bacillus circulans mutant E78Q/W71A
Descriptor: Endo-1,4-beta-xylanase
Authors:Chikunova, A, Saberi, M, Ubbink, M.
Deposit date:2023-11-28
Release date:2024-08-21
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Bimodal substrate binding in the active site of the glycosidase BcX.
Febs J., 2024
7CVM
DownloadVisualize
BU of 7cvm by Molmil
Crystal structure of glucose isomerase by fixed-target serial synchrotron crystallography (500 ms)
Descriptor: MAGNESIUM ION, Xylose isomerase
Authors:Nam, K.H.
Deposit date:2020-08-26
Release date:2020-09-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Fixed-Target Serial Synchrotron Crystallography Using Nylon Mesh and Enclosed Film-Based Sample Holder
Crystals, 10, 2020
8QXZ
DownloadVisualize
BU of 8qxz by Molmil
Xylanase from Bacillus circulans mutant E78Q/Y69A
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DI(HYDROXYETHYL)ETHER, Endo-1,4-beta-xylanase, ...
Authors:Chikunova, A, Saberi, M, Ubbink, M.
Deposit date:2023-10-25
Release date:2024-08-21
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Bimodal substrate binding in the active site of the glycosidase BcX.
Febs J., 2024
8QY1
DownloadVisualize
BU of 8qy1 by Molmil
Xylanase from Bacillus circulans mutant E78Q/Y69A bound to xylohexaose
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, Endo-1,4-beta-xylanase, ...
Authors:Chikunova, A, Saberi, M, Ubbink, M.
Deposit date:2023-10-25
Release date:2024-08-21
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Bimodal substrate binding in the active site of the glycosidase BcX.
Febs J., 2024
8QY0
DownloadVisualize
BU of 8qy0 by Molmil
Xylanase from Bacillus circulans mutant E78Q/Y69A bound to xylotriose
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Endo-1,4-beta-xylanase, ZINC ION, ...
Authors:Chikunova, A, Saberi, M, Ubbink, M.
Deposit date:2023-10-25
Release date:2024-08-21
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Bimodal substrate binding in the active site of the glycosidase BcX.
Febs J., 2024
8QY3
DownloadVisualize
BU of 8qy3 by Molmil
Xylanase from Bacillus circulans mutant E78Q/F125A bound to xylotriose
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, Endo-1,4-beta-xylanase, ...
Authors:Chikunova, A, Saberi, M, Ubbink, M.
Deposit date:2023-10-25
Release date:2024-08-21
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (1.24 Å)
Cite:Bimodal substrate binding in the active site of the glycosidase BcX.
Febs J., 2024

224572

数据于2024-09-04公开中

PDB statisticsPDBj update infoContact PDBjnumon