Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7WX1
DownloadVisualize
BU of 7wx1 by Molmil
E40K/M117L variant of Cu/Zn-superoxide dismutase from dog (Canis familiaris)
Descriptor: COPPER (II) ION, Superoxide dismutase [Cu-Zn], ZINC ION
Authors:Narikiyo, S, Furukawa, Y, Akutsu, M.
Deposit date:2022-02-14
Release date:2023-02-15
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Intrinsic structural vulnerability in the hydrophobic core induces species-specific aggregation of canine SOD1 with degenerative myelopathy-linked E40K mutation.
J.Biol.Chem., 299, 2023
7WX0
DownloadVisualize
BU of 7wx0 by Molmil
E40K variant of Cu/Zn-superoxide dismutase from dog (Canis familiaris)
Descriptor: COPPER (II) ION, Superoxide dismutase [Cu-Zn], ZINC ION
Authors:Narikiyo, S, Furukawa, Y, Akutsu, M.
Deposit date:2022-02-14
Release date:2023-02-15
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Intrinsic structural vulnerability in the hydrophobic core induces species-specific aggregation of canine SOD1 with degenerative myelopathy-linked E40K mutation.
J.Biol.Chem., 299, 2023
7WWY
DownloadVisualize
BU of 7wwy by Molmil
M117L variant of Cu/Zn-superoxide dismutase from dog (Canis familiaris)
Descriptor: COPPER (II) ION, Superoxide dismutase [Cu-Zn], ZINC ION
Authors:Narikiyo, S, Furukawa, Y, Akutsu, M.
Deposit date:2022-02-14
Release date:2023-02-15
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Intrinsic structural vulnerability in the hydrophobic core induces species-specific aggregation of canine SOD1 with degenerative myelopathy-linked E40K mutation.
J.Biol.Chem., 299, 2023
7WWT
DownloadVisualize
BU of 7wwt by Molmil
Cu/Zn-superoxide dismutase from dog (Canis familiaris)
Descriptor: COPPER (II) ION, Superoxide dismutase [Cu-Zn], ZINC ION
Authors:Narikiyo, S, Furukawa, Y, Akutsu, M.
Deposit date:2022-02-14
Release date:2023-02-15
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Intrinsic structural vulnerability in the hydrophobic core induces species-specific aggregation of canine SOD1 with degenerative myelopathy-linked E40K mutation.
J.Biol.Chem., 299, 2023
7WWO
DownloadVisualize
BU of 7wwo by Molmil
Dimer form of hypothetical protein TTHA1873 from Thermus thermophilus
Descriptor: CALCIUM ION, hypothetical protein TTHA1873
Authors:Yuvaraj, I, Sekar, K.
Deposit date:2022-02-14
Release date:2022-03-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Structure of the hypothetical protein TTHA1873 from Thermus thermophilus.
Acta Crystallogr.,Sect.F, 78, 2022
7WWM
DownloadVisualize
BU of 7wwm by Molmil
S protein of Delta variant in complex with ZWC6
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Guo, Y.Y, Zhang, Y.Y, Zhou, Q.
Deposit date:2022-02-13
Release date:2022-06-01
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Broadly neutralizing antibodies against Omicron-included SARS-CoV-2 variants induced by vaccination.
Signal Transduct Target Ther, 7, 2022
7WWL
DownloadVisualize
BU of 7wwl by Molmil
S protein of Delta variant in complex with ZWD12
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Guo, Y.Y, Zhang, Y.Y, Zhou, Q.
Deposit date:2022-02-13
Release date:2022-06-01
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Broadly neutralizing antibodies against Omicron-included SARS-CoV-2 variants induced by vaccination.
Signal Transduct Target Ther, 7, 2022
7WWF
DownloadVisualize
BU of 7wwf by Molmil
Crystal structure of BioH3 from Mycolicibacterium smegmatis
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DI(HYDROXYETHYL)ETHER, Esterase
Authors:Yang, J, Xu, Y.C, Gan, J.H, Feng, Y.J.
Deposit date:2022-02-12
Release date:2022-07-06
Last modified:2023-01-18
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Three enigmatic BioH isoenzymes are programmed in the early stage of mycobacterial biotin synthesis, an attractive anti-TB drug target.
Plos Pathog., 18, 2022
7WWA
DownloadVisualize
BU of 7wwa by Molmil
Crystal structure of MutT-8-oxo-dGTP complex: Reaction for 2.5 hr in 20 mM Mn2+
Descriptor: 7,8-dihydro-8-oxoguanine-triphosphatase, 8-OXO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE, MANGANESE (II) ION, ...
Authors:Nakamura, T, Yamagata, Y.
Deposit date:2022-02-12
Release date:2022-06-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Visualization of mutagenic nucleotide processing by Escherichia coli MutT, a Nudix hydrolase.
Proc.Natl.Acad.Sci.USA, 119, 2022
7WW9
DownloadVisualize
BU of 7ww9 by Molmil
Crystal structure of MutT-8-oxo-dGTP complex: Reaction for 1.5 hr in 20 mM Mn2+
Descriptor: 7,8-dihydro-8-oxoguanine-triphosphatase, 8-OXO-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE, 8-OXO-2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, ...
Authors:Nakamura, T, Yamagata, Y.
Deposit date:2022-02-12
Release date:2022-06-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Visualization of mutagenic nucleotide processing by Escherichia coli MutT, a Nudix hydrolase.
Proc.Natl.Acad.Sci.USA, 119, 2022
7WW8
DownloadVisualize
BU of 7ww8 by Molmil
Crystal structure of MutT-8-oxo-dGTP complex: Reaction for 5 hr in 5 mM Mn2+
Descriptor: 7,8-dihydro-8-oxoguanine-triphosphatase, 8-OXO-2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, MANGANESE (II) ION, ...
Authors:Nakamura, T, Yamagata, Y.
Deposit date:2022-02-12
Release date:2022-06-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Visualization of mutagenic nucleotide processing by Escherichia coli MutT, a Nudix hydrolase.
Proc.Natl.Acad.Sci.USA, 119, 2022
7WW7
DownloadVisualize
BU of 7ww7 by Molmil
Crystal structure of MutT-8-oxo-dGTP complex: Reaction for 1 hr in 5 mM Mn2+
Descriptor: 7,8-dihydro-8-oxoguanine-triphosphatase, 8-OXO-2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, MANGANESE (II) ION, ...
Authors:Nakamura, T, Yamagata, Y.
Deposit date:2022-02-12
Release date:2022-06-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Visualization of mutagenic nucleotide processing by Escherichia coli MutT, a Nudix hydrolase.
Proc.Natl.Acad.Sci.USA, 119, 2022
7WW6
DownloadVisualize
BU of 7ww6 by Molmil
Crystal structure of MutT-8-oxo-dGTP complex: Reaction for 20 min in 5 mM Mn2+
Descriptor: 7,8-dihydro-8-oxoguanine-triphosphatase, 8-OXO-2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, MANGANESE (II) ION, ...
Authors:Nakamura, T, Yamagata, Y.
Deposit date:2022-02-12
Release date:2022-06-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:Visualization of mutagenic nucleotide processing by Escherichia coli MutT, a Nudix hydrolase.
Proc.Natl.Acad.Sci.USA, 119, 2022
7WW5
DownloadVisualize
BU of 7ww5 by Molmil
Crystal structure of MutT-8-oxo-dGTP complex
Descriptor: 7,8-dihydro-8-oxoguanine-triphosphatase, 8-OXO-2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, SODIUM ION, ...
Authors:Nakamura, T, Yamagata, Y.
Deposit date:2022-02-12
Release date:2022-06-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Visualization of mutagenic nucleotide processing by Escherichia coli MutT, a Nudix hydrolase.
Proc.Natl.Acad.Sci.USA, 119, 2022
7WW4
DownloadVisualize
BU of 7ww4 by Molmil
Crystal structure of multidomain beta-1,3(4)-glucanase
Descriptor: CALCIUM ION, GLYCEROL, beta-1,3(4)-glucanase
Authors:Jiang, Z.Q, Ma, J.W.
Deposit date:2022-02-12
Release date:2023-02-15
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.23006082 Å)
Cite:Crystal structure of multidomain beta-1,3(4)-glucanase
To be published
7WW0
DownloadVisualize
BU of 7ww0 by Molmil
The crystal structure of FinI complex with SAH
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DI(HYDROXYETHYL)ETHER, ...
Authors:Zhou, J, Lu, J.
Deposit date:2022-02-12
Release date:2023-02-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The crystal structure of FinI complex with SAH
To Be Published
7WVS
DownloadVisualize
BU of 7wvs by Molmil
The structure of FinI complex with SAM
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, Methyltransf_2 domain-containing protein, ...
Authors:Lu, J, Zhou, J.
Deposit date:2022-02-11
Release date:2023-02-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:The structure of FinI complex with SAM
To Be Published
7WVR
DownloadVisualize
BU of 7wvr by Molmil
Crystal structure of Talaromyces leycettanus JCM12802 expansin
Descriptor: EXLX1
Authors:Ding, S.J, Luo, H.Y, Yao, B, Tu, T.
Deposit date:2022-02-11
Release date:2022-12-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:Boosting enzymatic degradation of cellulose using a fungal expansin: Structural insight into the pretreatment mechanism
Bioresour Technol, 358, 2022
7WVM
DownloadVisualize
BU of 7wvm by Molmil
The complex structure of PD-1 and cemiplimab
Descriptor: Heavy Chain of Cemiplimab, Light Chain of Cemiplimab, Programmed cell death protein 1
Authors:Lu, D, Xu, Z.P, Liu, K.F, Tan, S.G, Gao, G.F, Chai, Y.
Deposit date:2022-02-10
Release date:2022-04-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:PD-1 N58-Glycosylation-Dependent Binding of Monoclonal Antibody Cemiplimab for Immune Checkpoint Therapy.
Front Immunol, 13, 2022
7WVL
DownloadVisualize
BU of 7wvl by Molmil
Structure of P4A2 Fab in complex with Spike-RBD from SARS-CoV-2
Descriptor: P4A2 Fab Light Chain, P4A2 Fab heavy chain, Spike protein S1
Authors:Narayanan, N, Nair, D.T.
Deposit date:2022-02-10
Release date:2022-12-07
Last modified:2022-12-21
Method:X-RAY DIFFRACTION (3 Å)
Cite:A broadly neutralizing monoclonal antibody overcomes the mutational landscape of emerging SARS-CoV-2 variants of concern.
Plos Pathog., 18, 2022
7WVK
DownloadVisualize
BU of 7wvk by Molmil
Crystal structure of human WDR5 in complex with compound 19
Descriptor: 1,2-ETHANEDIOL, 1-[2,5-bis(chloranyl)phenyl]sulfonylbenzimidazole, GLYCEROL, ...
Authors:Han, Q.L, Zhang, X.L, Wang, L, Ren, P.X, Cao, Y, Li, K, Bai, F.
Deposit date:2022-02-10
Release date:2022-10-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Discovery, evaluation and mechanism study of WDR5-targeted small molecular inhibitors for neuroblastoma.
Acta Pharmacol.Sin., 44, 2023
7WVA
DownloadVisualize
BU of 7wva by Molmil
Crystal structure of mouse Cryptochrome 1 in complex with TH401 compound
Descriptor: 2-(1-methylbenzimidazol-2-yl)sulfanyl-N-[(E)-(2,3,4-trimethoxyphenyl)methylideneamino]ethanamide, Cryptochrome-1
Authors:Miller, S.A, Hirota, T.
Deposit date:2022-02-10
Release date:2022-09-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:A methylbenzimidazole derivative regulates mammalian circadian rhythms by targeting Cryptochrome proteins.
F1000Res, 11, 2022
7WUY
DownloadVisualize
BU of 7wuy by Molmil
The crystal structure of FinI in complex with SAM and fischerin
Descriptor: 1,2-ETHANEDIOL, 3-[[(1~{S},2~{R},4~{a}~{S},8~{a}~{S})-2-methyl-1,2,4~{a},5,6,7,8,8~{a}-octahydronaphthalen-1-yl]carbonyl]-5-[(1~{S},2~{R},5~{S},6~{S})-2,5-bis(oxidanyl)-7-oxabicyclo[4.1.0]heptan-2-yl]-4-oxidanyl-1~{H}-pyridin-2-one, DI(HYDROXYETHYL)ETHER, ...
Authors:Zhou, J, Lu, J.
Deposit date:2022-02-09
Release date:2023-02-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:The crystal structure of FinI in complex with SAM and fischerin
To Be Published
7WUX
DownloadVisualize
BU of 7wux by Molmil
Crystal structure of AziU3/U2 complexed with (5S,6S)-O7-sulfo DADH from Streptomyces sahachiroi
Descriptor: (2S,5S,6S)-2,6-bis(azanyl)-5-oxidanyl-7-sulfooxy-heptanoic acid, 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE, AziU2, ...
Authors:Kurosawa, S, Yoshida, A, Tomita, T, Nishiyama, M.
Deposit date:2022-02-09
Release date:2022-09-07
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Molecular Basis for Enzymatic Aziridine Formation via Sulfate Elimination.
J.Am.Chem.Soc., 144, 2022
7WUW
DownloadVisualize
BU of 7wuw by Molmil
Crystal structure of AziU3/U2 from Streptomyces sahachiroi
Descriptor: AziU2, AziU3, MAGNESIUM ION, ...
Authors:Kurosawa, S, Yoshida, A, Tomita, T, Nishiyama, M.
Deposit date:2022-02-09
Release date:2022-09-07
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Molecular Basis for Enzymatic Aziridine Formation via Sulfate Elimination.
J.Am.Chem.Soc., 144, 2022

222415

数据于2024-07-10公开中

PDB statisticsPDBj update infoContact PDBjnumon