PDB: 82129 resultsInfo pagesStatus searchChemie searchBIRD

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8VMZ	Homing endonuclease I-PpoI-DNA complex:reaction at pH6.0 (K+ MES) with 500 uM Mg2+ for 40s Descriptor: DNA (5'-D(*TP*TP*GP*AP*CP*TP*CP*TP*CP*TP*TP*AP*AP*GP*AP*GP*AP*GP*TP*CP*A)-3'), GLYCEROL, Intron-encoded endonuclease I-PpoI, ... Authors: Chang, C, Gao, Y. Deposit date: 2024-01-13 Release date: 2024-07-10 Method: X-RAY DIFFRACTION (1.57 Å) Cite: Homing endonuclease I-PpoI-DNA complex:reaction with 500 uM Mg2+ for 160s To Be Published
8VMY	Homing endonuclease I-PpoI-DNA complex:reaction at pH6.0 (K+ MES) with 500 uM Mg2+ for 20s Descriptor: DNA (5'-D(*TP*TP*GP*AP*CP*TP*CP*TP*CP*TP*TP*AP*AP*GP*AP*GP*AP*GP*TP*CP*A)-3'), GLYCEROL, Intron-encoded endonuclease I-PpoI, ... Authors: Chang, C, Gao, Y. Deposit date: 2024-01-13 Release date: 2024-07-10 Method: X-RAY DIFFRACTION (1.53 Å) Cite: Homing endonuclease I-PpoI-DNA complex:reaction with 500 uM Mg2+ for 160s To Be Published
8VMX	Homing endonuclease I-PpoI-DNA complex:reaction at pH6.0 (K+ MES) with 500 uM Mg2+ for 10s Descriptor: DNA (5'-D(*TP*TP*GP*AP*CP*TP*CP*TP*CP*TP*TP*AP*AP*GP*AP*GP*AP*GP*TP*CP*A)-3'), GLYCEROL, Intron-encoded endonuclease I-PpoI, ... Authors: Chang, C, Gao, Y. Deposit date: 2024-01-13 Release date: 2024-07-10 Method: X-RAY DIFFRACTION (1.45 Å) Cite: Homing endonuclease I-PpoI-DNA complex:reaction with 500 uM Mg2+ for 160s To Be Published
8VMW	Homing endonuclease I-PpoI-DNA complex:ground state at pH6.0 (K+ MES) with Na+ Descriptor: DNA (5'-D(*TP*TP*GP*AP*CP*TP*CP*TP*CP*TP*TP*AP*AP*GP*AP*GP*AP*GP*TP*CP*A)-3'), GLYCEROL, Intron-encoded endonuclease I-PpoI, ... Authors: Chang, C, Gao, Y. Deposit date: 2024-01-13 Release date: 2024-07-10 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Homing endonuclease I-PpoI-DNA complex:reaction with 500 uM Mg2+ for 160s To Be Published
8VMV	Homing endonuclease I-PpoI-DNA complex:reaction at pH7.0 (K+ MES) with 500 uM Mg2+ for 600s Descriptor: DNA (5'-D(*TP*TP*GP*AP*CP*TP*CP*TP*CP*TP*TP*AP*A)-3'), DNA (5'-D(P*GP*AP*GP*AP*GP*TP*CP*A)-3'), GLYCEROL, ... Authors: Chang, C, Gao, Y. Deposit date: 2024-01-13 Release date: 2024-07-10 Method: X-RAY DIFFRACTION (1.59 Å) Cite: Homing endonuclease I-PpoI-DNA complex:reaction with 500 uM Mg2+ for 160s To Be Published
8VMU	Homing endonuclease I-PpoI-DNA complex:reaction at pH7.0 (K+ MES) with 500 uM Mg2+ for 320s Descriptor: DNA (5'-D(*TP*TP*GP*AP*CP*TP*CP*TP*CP*TP*TP*AP*AP*GP*AP*GP*AP*GP*TP*CP*A)-3'), GLYCEROL, Intron-encoded endonuclease I-PpoI, ... Authors: Chang, C, Gao, Y. Deposit date: 2024-01-13 Release date: 2024-07-10 Method: X-RAY DIFFRACTION (1.52 Å) Cite: Homing endonuclease I-PpoI-DNA complex:reaction with 500 uM Mg2+ for 160s To Be Published
8VMT	Homing endonuclease I-PpoI-DNA complex:reaction at pH7.0 (K+ MES) with 500 uM Mg2+ for 160s Descriptor: DNA (5'-D(*TP*TP*GP*AP*CP*TP*CP*TP*CP*TP*TP*AP*AP*GP*AP*GP*AP*GP*TP*CP*A)-3'), GLYCEROL, Intron-encoded endonuclease I-PpoI, ... Authors: Chang, C, Gao, Y. Deposit date: 2024-01-13 Release date: 2024-07-10 Method: X-RAY DIFFRACTION (1.48 Å) Cite: Homing endonuclease I-PpoI-DNA complex:reaction with 500 uM Mg2+ for 160s To Be Published
8VMS	Homing endonuclease I-PpoI-DNA complex:reaction at pH7.0 (K+ MES) with 500 uM Mg2+ for 80s Descriptor: DNA (5'-D(*TP*TP*GP*AP*CP*TP*CP*TP*CP*TP*TP*AP*AP*GP*AP*GP*AP*GP*TP*CP*A)-3'), GLYCEROL, Intron-encoded endonuclease I-PpoI, ... Authors: Chang, C, Gao, Y. Deposit date: 2024-01-13 Release date: 2024-07-10 Method: X-RAY DIFFRACTION (1.42 Å) Cite: Homing endonuclease I-PpoI-DNA complex:reaction with 500 uM Mg2+ for 160s To Be Published
8VMR	Homing endonuclease I-PpoI-DNA complex:reaction at pH7.0 (K+ MES) with 500 uM Mg2+ for 40s Descriptor: DNA (5'-D(*TP*TP*GP*AP*CP*TP*CP*TP*CP*TP*TP*AP*A)-3'), GLYCEROL, Intron-encoded endonuclease I-PpoI, ... Authors: Chang, C, Gao, Y. Deposit date: 2024-01-13 Release date: 2024-07-10 Method: X-RAY DIFFRACTION (1.5 Å) Cite: Homing endonuclease I-PpoI-DNA complex:reaction with 500 uM Mg2+ for 160s To Be Published
8VMQ	Homing endonuclease I-PpoI-DNA complex:reaction at pH7.0 (K+ MES) with 500 uM Mg2+ for 20s Descriptor: DNA (5'-D(*TP*TP*GP*AP*CP*TP*CP*TP*CP*TP*TP*AP*AP*GP*AP*GP*AP*GP*TP*CP*A)-3'), GLYCEROL, Intron-encoded endonuclease I-PpoI, ... Authors: Chang, C, Gao, Y. Deposit date: 2024-01-13 Release date: 2024-07-10 Method: X-RAY DIFFRACTION (1.48 Å) Cite: Homing endonuclease I-PpoI-DNA complex:reaction with 500 uM Mg2+ for 160s To Be Published
8VMP	Homing endonuclease I-PpoI-DNA complex:reaction at pH7.0 (K+ MES) with 500 uM Mg2+ for 10s Descriptor: DNA (5'-D(*TP*TP*GP*AP*CP*TP*CP*TP*CP*TP*TP*AP*AP*GP*AP*GP*AP*GP*TP*CP*A)-3'), GLYCEROL, Intron-encoded endonuclease I-PpoI, ... Authors: Chang, C, Gao, Y. Deposit date: 2024-01-13 Release date: 2024-07-10 Method: X-RAY DIFFRACTION (1.45 Å) Cite: Homing endonuclease I-PpoI-DNA complex:reaction with 500 uM Mg2+ for 160s To Be Published
8VMO	Homing endonuclease I-PpoI-DNA complex:ground state at pH7.0 (K+ MES) with Na+ Descriptor: DNA (5'-D(*TP*TP*GP*AP*CP*TP*CP*TP*CP*TP*TP*AP*AP*GP*AP*GP*AP*GP*TP*CP*A)-3'), GLYCEROL, Intron-encoded endonuclease I-PpoI, ... Authors: Chang, C, Gao, Y. Deposit date: 2024-01-13 Release date: 2024-07-10 Method: X-RAY DIFFRACTION (1.68 Å) Cite: Homing endonuclease I-PpoI-DNA complex:reaction with 500 uM Mg2+ for 160s To Be Published
8VM2	Crystal Structure of NRAS Q61K bound to GTP Descriptor: GTPase NRas, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... Authors: Gebregiworgis, T, Chan, J.Y.L, Kuntz, D.A, Prive, G.G, Marshall, C.B, Ikura, M. Deposit date: 2024-01-12 Release date: 2024-05-01 Method: X-RAY DIFFRACTION (1.74 Å) Cite: Crystal structure of NRAS Q61K with a ligand-induced pocket near switch II. Eur J Cell Biol, 103, 2024
8VLB	Crystal structure of EloBC-VHL-CDO1 complex bound to compound 4 molecular glue Descriptor: CITRIC ACID, Cysteine dioxygenase type 1, Elongin-B, ... Authors: Shu, W, Ma, X, Tutter, A, Buckley, D, Golosov, A, Michaud, G. Deposit date: 2024-01-11 Release date: 2024-03-13 Method: X-RAY DIFFRACTION (2.9 Å) Cite: A small molecule VHL molecular glue degrader for cysteine dioxygenase 1 To Be Published
8VL9	Crystal structure of EloBC-VHL-CDO1 complex bound to compound 8 molecular glue Descriptor: CITRIC ACID, Cysteine dioxygenase type 1, Elongin-B, ... Authors: Shu, W, Ma, X, Tutter, A, Buckley, D, Golosov, A, Michaud, G. Deposit date: 2024-01-11 Release date: 2024-03-13 Method: X-RAY DIFFRACTION (2.5 Å) Cite: A small molecule VHL molecular glue degrader for cysteine dioxygenase 1 To Be Published
8VL7	Co-crystal structure of human TREX1 in complex with an inhibitor Descriptor: (2P)-2-[3-bromo-2-(2-hydroxyethoxy)phenyl]-5-hydroxy-1-methyl-N-(1,2-oxazol-4-yl)-6-oxo-1,6-dihydropyrimidine-4-carboxamide, DI(HYDROXYETHYL)ETHER, GLYCEROL, ... Authors: Dehghani-Tafti, S, Dong, A, Li, Y, Ackloo, S, Arrowsmith, C.H, Edwards, A.M, Halabelian, L. Deposit date: 2024-01-11 Release date: 2024-01-24 Method: X-RAY DIFFRACTION (1.88 Å) Cite: Co-crystal structure of human TREX1 in complex with an inhibitor To be published
8VKT	Crystallographic structure of dimetalated DapE from Enterococcus faecium Descriptor: 1,2-ETHANEDIOL, GLYCEROL, Probable succinyl-diaminopimelate desuccinylase, ... Authors: Gonzalez-Segura, L, Diaz-Vilchis, A, Terrazas-Lopez, M, Diaz-Sanchez, A.G. Deposit date: 2024-01-09 Release date: 2024-05-29 Last modified: 2024-06-05 Method: X-RAY DIFFRACTION (1.398 Å) Cite: The three-dimensional structure of DapE from Enterococcus faecium reveals new insights into DapE/ArgE subfamily ligand specificity. Int.J.Biol.Macromol., 270, 2024
8VKF	The crystal structure of wild-type CYP199A4 bound to 4-propionylbenzoic acid Descriptor: 4-propanoylbenzoic acid, CHLORIDE ION, Cytochrome P450, ... Authors: Podgorski, M.N, Bell, S.G. Deposit date: 2024-01-09 Release date: 2024-05-08 Method: X-RAY DIFFRACTION (1.7 Å) Cite: The crystal structure of wild-type CYP199A4 bound to 4-propionylbenzoic acid To Be Published
8VK2	X-ray crystal structure of human IgE 4C8 Fab Descriptor: IgE 4C8 heavy chain, IgE 4C8 light chain Authors: Khatri, K, Ball, A, Smith, S.A, Champan, M.D, Pomes, A, Chruszcz, M. Deposit date: 2024-01-08 Release date: 2024-06-19 Method: X-RAY DIFFRACTION (2.508 Å) Cite: Structural analysis of human IgE monoclonal antibody epitopes on dust mite allergen Der p 2. J.Allergy Clin.Immunol., 2024
8VK1	X-ray crystal structure of human IgE 4C8 Fab complex with Der p 2.0103 Descriptor: Der p 2 variant 3, IgE 4C8 heavy chain, IgE 4C8 light chain Authors: Khatri, K, Ball, A, Smith, S.A, Champan, M.D, Pomes, A, Chruszcz, M. Deposit date: 2024-01-08 Release date: 2024-06-19 Method: X-RAY DIFFRACTION (3.05 Å) Cite: Structural analysis of human IgE monoclonal antibody epitopes on dust mite allergen Der p 2. J.Allergy Clin.Immunol., 2024
8VJN	Myxococcus xanthus encapsulin cargo protein EncD in complex with flavin mononucleotide Descriptor: Encapsulin nanocompartment cargo protein EncD, FLAVIN MONONUCLEOTIDE Authors: Eren, E. Deposit date: 2024-01-07 Release date: 2024-05-08 Last modified: 2024-06-05 Method: X-RAY DIFFRACTION (2.31 Å) Cite: Myxococcus xanthus encapsulin cargo protein EncD is a flavin-binding protein with ferric reductase activity. Proc.Natl.Acad.Sci.USA, 121, 2024
8VJ3	Crystal Structure of Betaine aldehyde dehydrogenase (BetB) from Klebsiella aerogenes (FAD bound) Descriptor: Betaine aldehyde dehydrogenase, FLAVIN-ADENINE DINUCLEOTIDE Authors: Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID) Deposit date: 2024-01-05 Release date: 2024-01-17 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Crystal Structure of Betaine aldehyde dehydrogenase (BetB) from Klebsiella aerogenes (FAD bound) To be published
8VIS	Human TMPRSS11D complexed with a disulfide-linked autoinhibitory DDDDK peptide Descriptor: 1,2-ETHANEDIOL, GLYCEROL, MAGNESIUM ION, ... Authors: Fraser, B.J, Dong, A, Ilyassov, O, Kenney, T, Li, Y.Y, Seitova, A, Li, Y, Hejazi, Z, Edwards, A, Benard, F, Arrowsmith, C. Deposit date: 2024-01-05 Release date: 2024-01-31 Method: X-RAY DIFFRACTION (1.59 Å) Cite: Human TMPRSS11D complexed with a disulfide-linked autoinhibitory DDDDK peptide To Be Published
8VHL	Structure of DHODH in Complex with Ligand 17 Descriptor: ACETATE ION, Dihydroorotate dehydrogenase (quinone), mitochondrial, ... Authors: Shaffer, P.L. Deposit date: 2024-01-02 Release date: 2024-04-03 Method: X-RAY DIFFRACTION (1.93 Å) Cite: Discovery of Alternative Binding Poses through Fragment-Based Identification of DHODH Inhibitors. Acs Med.Chem.Lett., 15, 2024
8VHE	Crystal Structure of Human IDH1 R132Q in Complex with NADPH-TCEP Adduct Descriptor: 3,3',3''-({(4R)-1-[(2R,3R,4S,5R)-5-({[(S)-{[(S)-{[(2R,3R,4R,5R)-5-(6-amino-9H-purin-9-yl)-3-hydroxy-4-(phosphonooxy)oxolan-2-yl]methoxy}(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]oxy}methyl)-3,4-dihydroxyoxolan-2-yl]-3-carbamoyl-1,4-dihydropyridin-4-yl}-lambda~5~-phosphanetriyl)tripropanoic acid, CALCIUM ION, CHLORIDE ION, ... Authors: Mealka, M, Sohl, C.D, Huxford, T. Deposit date: 2023-12-31 Release date: 2024-04-24 Last modified: 2024-05-22 Method: X-RAY DIFFRACTION (2.16 Å) Cite: Active site remodeling in tumor-relevant IDH1 mutants drives distinct kinetic features and potential resistance mechanisms. Nat Commun, 15, 2024

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