Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

6BWM
DownloadVisualize
BU of 6bwm by Molmil
Crystal structure of the TRPV2 ion channel
Descriptor: CALCIUM ION, Transient receptor potential cation channel subfamily V member 2
Authors:Zubcevic, L, Le, S, Yang, H, Lee, S.Y.
Deposit date:2017-12-15
Release date:2018-05-02
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Conformational plasticity in the selectivity filter of the TRPV2 ion channel.
Nat. Struct. Mol. Biol., 25, 2018
6NR4
DownloadVisualize
BU of 6nr4 by Molmil
Cryo-EM structure of the TRPM8 ion channel with low occupancy icilin, PI(4,5)P2, and calcium
Descriptor: Transient receptor potential cation channel subfamily M member 8
Authors:Yin, Y, Le, S.C, Hsu, A.L, Borgnia, M.J, Yang, H, Lee, S.-Y.
Deposit date:2019-01-22
Release date:2019-02-20
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Structural basis of cooling agent and lipid sensing by the cold-activated TRPM8 channel.
Science, 363, 2019
6NR3
DownloadVisualize
BU of 6nr3 by Molmil
Cryo-EM structure of the TRPM8 ion channel in complex with high occupancy icilin, PI(4,5)P2, and calcium
Descriptor: (2S)-1-{[(R)-hydroxy{[(1R,2R,3S,4R,5R,6S)-2,3,6-trihydroxy-4,5-bis(phosphonooxy)cyclohexyl]oxy}phosphoryl]oxy}-3-(octadecanoyloxy)propan-2-yl icosa-5,8,11,14-tetraenoate, CALCIUM ION, Icilin, ...
Authors:Yin, Y, Le, S.C, Hsu, A.L, Borgnia, M.J, Yang, H, Lee, S.-Y.
Deposit date:2019-01-22
Release date:2019-02-20
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural basis of cooling agent and lipid sensing by the cold-activated TRPM8 channel.
Science, 363, 2019
1JKC
DownloadVisualize
BU of 1jkc by Molmil
HUMAN LYSOZYME MUTANT WITH TRP 109 REPLACED BY PHE
Descriptor: LYSOZYME, NITRATE ION
Authors:Muraki, M, Harata, K, Goda, S, Nagahora, H.
Deposit date:1996-11-13
Release date:1997-05-15
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Importance of van der Waals contact between Glu 35 and Trp 109 to the catalytic action of human lysozyme.
Protein Sci., 6, 1997
6E7P
DownloadVisualize
BU of 6e7p by Molmil
cryo-EM structure of human TRPML1 with PI35P2
Descriptor: (1R,2S,3S,4R,5S,6R)-5-{[(R)-[(2R)-2,3-bis{[(1S)-1-hydroxyoctyl]oxy}propoxy](hydroxy)phosphoryl]oxy}-2,4,6-trihydroxycyclohexane-1,3-diyl bis[dihydrogen (phosphate)], Mucolipin-1
Authors:Schmiege, P, Li, X.
Deposit date:2018-07-27
Release date:2018-11-28
Last modified:2025-06-04
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural basis for PtdInsP2-mediated human TRPML1 regulation.
Nat Commun, 9, 2018
8I1Y
DownloadVisualize
BU of 8i1y by Molmil
The structure of E. coli TrpRS bound with a chemical fragment
Descriptor: 5-ethanoylthiophene-2-carbonitrile, SULFATE ION, TRYPTOPHANYL-5'AMP, ...
Authors:Xiang, M, Zhou, H.
Deposit date:2023-01-13
Release date:2023-04-12
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:An asymmetric structure of bacterial TrpRS supports the half-of-the-sites catalytic mechanism and facilitates antimicrobial screening.
Nucleic Acids Res., 51, 2023
8I4I
DownloadVisualize
BU of 8i4i by Molmil
The asymmetric structure of homodimeric E. coli TrpRS bound with tryptophanyl adenylate and L-tryptophan
Descriptor: SULFATE ION, TRYPTOPHAN, TRYPTOPHANYL-5'AMP, ...
Authors:Xiang, M, Zhou, H.
Deposit date:2023-01-19
Release date:2023-04-12
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:An asymmetric structure of bacterial TrpRS supports the half-of-the-sites catalytic mechanism and facilitates antimicrobial screening.
Nucleic Acids Res., 51, 2023
8I1W
DownloadVisualize
BU of 8i1w by Molmil
The asymmetric structure of homodimeric E. coli TrpRS bound with tryptophanyl adenylate at one of its two active pockets
Descriptor: SULFATE ION, TRYPTOPHANYL-5'AMP, Tryptophan--tRNA ligase
Authors:Xiang, M, Zhou, H.
Deposit date:2023-01-13
Release date:2023-04-12
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:An asymmetric structure of bacterial TrpRS supports the half-of-the-sites catalytic mechanism and facilitates antimicrobial screening.
Nucleic Acids Res., 51, 2023
6E7Z
DownloadVisualize
BU of 6e7z by Molmil
cryo-EM structure of human TRPML1 with ML-SA1 and PI35P2
Descriptor: (1R,2S,3S,4R,5S,6R)-5-{[(R)-[(2R)-2,3-bis{[(1S)-1-hydroxyoctyl]oxy}propoxy](hydroxy)phosphoryl]oxy}-2,4,6-trihydroxycyclohexane-1,3-diyl bis[dihydrogen (phosphate)], 2-{2-oxo-2-[(4S)-2,2,4-trimethyl-3,4-dihydroquinolin-1(2H)-yl]ethyl}-1H-isoindole-1,3(2H)-dione, Mucolipin-1
Authors:Schmiege, P, Li, X.
Deposit date:2018-07-27
Release date:2018-11-28
Last modified:2025-05-21
Method:ELECTRON MICROSCOPY (3.73 Å)
Cite:Structural basis for PtdInsP2-mediated human TRPML1 regulation.
Nat Commun, 9, 2018
6E7Y
DownloadVisualize
BU of 6e7y by Molmil
cryo-EM structure of human TRPML1 with PI45P2
Descriptor: Mucolipin-1, [(2R)-2-octanoyloxy-3-[oxidanyl-[(1R,2R,3S,4R,5R,6S)-2,3,6-tris(oxidanyl)-4,5-diphosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propyl] octanoate
Authors:Schmiege, P, Li, X.
Deposit date:2018-07-27
Release date:2018-11-28
Last modified:2025-05-21
Method:ELECTRON MICROSCOPY (3.57 Å)
Cite:Structural basis for PtdInsP2-mediated human TRPML1 regulation.
Nat Commun, 9, 2018
9IQX
DownloadVisualize
BU of 9iqx by Molmil
Cryo-EM structure of the human TRPV4-RhoA in complex with AH001
Descriptor: (1~{R})-1-(3-ethylphenyl)ethane-1,2-diol, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Yuan, Z, Ruan, S.S, Li, S.L.
Deposit date:2024-07-13
Release date:2025-05-28
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (3.37 Å)
Cite:Inactivation of RhoA for Hypertension Treatment Through the TRPV4-RhoA-RhoGDI1 Axis.
Circulation, 2025
3JXJ
DownloadVisualize
BU of 3jxj by Molmil
Crystal structure of the chicken TRPV4 ankyrin repeat domain
Descriptor: PHOSPHATE ION, Vanilloid receptor-related osmotically activated channel protein
Authors:Phelps, C.B, Choo, S.S, Gaudet, R.
Deposit date:2009-09-19
Release date:2009-12-22
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Mutations in TRPV4 cause Charcot-Marie-Tooth disease type 2C.
Nat.Genet., 42, 2010
6PKX
DownloadVisualize
BU of 6pkx by Molmil
Cryo-EM structure of the zebrafish TRPM2 channel in the presence of ADPR and Ca2+
Descriptor: CALCIUM ION, Transient receptor potential cation channel subfamily M member 2, [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE
Authors:Yin, Y, Wu, M, Hsu, A.L, Borschel, W.F, Borgnia, M.J, Lander, G.C, Lee, S.-Y.
Deposit date:2019-06-30
Release date:2019-08-28
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Visualizing structural transitions of ligand-dependent gating of the TRPM2 channel.
Nat Commun, 10, 2019
9IQY
DownloadVisualize
BU of 9iqy by Molmil
Cryo-EM structure of human TRPV4 intracellular domain in complex with GTPase RhoA
Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Transforming protein RhoA, ...
Authors:Yuan, Z, Ruan, S.S, Li, S.L.
Deposit date:2024-07-13
Release date:2025-05-28
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (3.16 Å)
Cite:Inactivation of RhoA for Hypertension Treatment Through the TRPV4-RhoA-RhoGDI1 Axis.
Circulation, 2025
9M36
DownloadVisualize
BU of 9m36 by Molmil
Structure of human TRPC5 in the low Ca environment.
Descriptor: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, CHOLESTEROL HEMISUCCINATE, PHOSPHATIDYLETHANOLAMINE, ...
Authors:Song, K.C, Wei, M, Chen, L.
Deposit date:2025-02-28
Release date:2025-07-02
Last modified:2025-07-16
Method:ELECTRON MICROSCOPY (2.48 Å)
Cite:Structure of human TRPC5 in the low Ca environment.
To Be Published
9M5V
DownloadVisualize
BU of 9m5v by Molmil
Structure of human TRPC5 bound with (-)-englerin A,class1
Descriptor: (-)-englerin A, CALCIUM ION, CHOLESTEROL HEMISUCCINATE, ...
Authors:Chen, Y.K, Wei, M, Chen, L, Guo, W.J.
Deposit date:2025-03-06
Release date:2025-07-02
Method:ELECTRON MICROSCOPY (2.53 Å)
Cite:Class1 structure of human TRPC5 bound with (-)-englerin A
To Be Published
9M4W
DownloadVisualize
BU of 9m4w by Molmil
Structure of human TRPC5 bound with (-)-englerin A, class 2.
Descriptor: (-)-englerin A, (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, CHOLESTEROL HEMISUCCINATE, ...
Authors:Chen, Y.K, Wei, M, Chen, L.
Deposit date:2025-03-05
Release date:2025-07-02
Method:ELECTRON MICROSCOPY (2.62 Å)
Cite:Structure of human TRPC5 bound with (-)-englerin A, class 2.
To Be Published
1L98
DownloadVisualize
BU of 1l98 by Molmil
PERTURBATION OF TRP 138 IN T4 LYSOZYME BY MUTATIONS AT GLN 105 USED TO CORRELATE CHANGES IN STRUCTURE, STABILITY, SOLVATION, AND SPECTROSCOPIC PROPERTIES
Descriptor: BETA-MERCAPTOETHANOL, T4 LYSOZYME
Authors:Pjura, P, Mcintosh, L.P, Wozniak, J.A, Matthews, B.W.
Deposit date:1992-07-13
Release date:1993-10-31
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Perturbation of Trp 138 in T4 lysozyme by mutations at Gln 105 used to correlate changes in structure, stability, solvation, and spectroscopic properties.
Proteins, 15, 1993
1L00
DownloadVisualize
BU of 1l00 by Molmil
PERTURBATION OF TRP 138 IN T4 LYSOZYME BY MUTATIONS AT GLN 105 USED TO CORRELATE CHANGES IN STRUCTURE, STABILITY, SOLVATION, AND SPECTROSCOPIC PROPERTIES
Descriptor: BETA-MERCAPTOETHANOL, T4 LYSOZYME
Authors:Pjura, P, Mcintosh, L.P, Wozniak, J.A, Matthews, B.W.
Deposit date:1992-07-13
Release date:1993-10-31
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Perturbation of Trp 138 in T4 lysozyme by mutations at Gln 105 used to correlate changes in structure, stability, solvation, and spectroscopic properties.
Proteins, 15, 1993
1L99
DownloadVisualize
BU of 1l99 by Molmil
PERTURBATION OF TRP 138 IN T4 LYSOZYME BY MUTATIONS AT GLN 105 USED TO CORRELATE CHANGES IN STRUCTURE, STABILITY, SOLVATION, AND SPECTROSCOPIC PROPERTIES
Descriptor: BETA-MERCAPTOETHANOL, T4 LYSOZYME
Authors:Pjura, P, Mcintosh, L.P, Wozniak, J.A, Matthews, B.W.
Deposit date:1992-07-13
Release date:1993-10-31
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Perturbation of Trp 138 in T4 lysozyme by mutations at Gln 105 used to correlate changes in structure, stability, solvation, and spectroscopic properties.
Proteins, 15, 1993
6F55
DownloadVisualize
BU of 6f55 by Molmil
Complex structure of PACSIN SH3 domain and TRPV4 proline rich region
Descriptor: PACSIN 3, PRR
Authors:Glogowski, N.A, Goretzki, B, Diehl, E, Duchardt-Ferner, E, Hacker, C, Hellmich, U.A.
Deposit date:2017-11-30
Release date:2018-10-03
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural Basis of TRPV4 N Terminus Interaction with Syndapin/PACSIN1-3 and PIP2.
Structure, 26, 2018
8E6S
DownloadVisualize
BU of 8e6s by Molmil
Human TRPM2 ion channel in 1 mM dADPR and Ca2+
Descriptor: 2'-DEOXYADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5-DIPHOSPHORIBOSE, CALCIUM ION, ...
Authors:Wang, L, Fu, T.M, Xia, S, Wu, H.
Deposit date:2022-08-23
Release date:2024-08-14
Last modified:2025-05-14
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:A unified mechanism for human TRPM2 activation, desensitization and inhibition
To Be Published
8E6V
DownloadVisualize
BU of 8e6v by Molmil
MHR1/2 and NUDT9H of human TRPM2 in 1 mM dADPR (local refinement)
Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, Transient receptor potential cation channel subfamily M member 2, ZINC ION
Authors:Wang, L, Fu, T.M, Xia, S, Wu, H.
Deposit date:2022-08-23
Release date:2024-08-14
Last modified:2025-05-28
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:A unified mechanism for human TRPM2 activation, desensitization and inhibition
To Be Published
8E6U
DownloadVisualize
BU of 8e6u by Molmil
Human TRPM2 ion channel in 1 mM F-dADPR
Descriptor: Transient receptor potential cation channel subfamily M member 2, [(2R,3S,5R)-5-(6-amino-8-phenyl-9H-purin-9-yl)-3-hydroxyoxolan-2-yl]methyl [(2R,3S,4S,5R)-3,4,5-trihydroxyoxolan-2-yl]methyl dihydrogen diphosphate (non-preferred name)
Authors:Wang, L, Fu, T.M, Xia, S, Wu, H.
Deposit date:2022-08-23
Release date:2024-08-14
Last modified:2025-06-04
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:A unified mechanism for human TRPM2 activation, desensitization and inhibition
To Be Published
8E6Q
DownloadVisualize
BU of 8e6q by Molmil
Human TRPM2 ion channel in 1 mM ADPR
Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, Transient receptor potential cation channel subfamily M member 2
Authors:Wang, L, Fu, T.M, Xia, S, Wu, H.
Deposit date:2022-08-23
Release date:2024-08-14
Last modified:2025-06-04
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:A unified mechanism for human TRPM2 activation, desensitization and inhibition
To Be Published

238895

数据于2025-07-16公开中

PDB statisticsPDBj update infoContact PDBjnumon