Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8T58
DownloadVisualize
BU of 8t58 by Molmil
Structure of VHH-Fab complex with engineered FNQIKG elbow region
Descriptor: CHLORIDE ION, Fab heavy chain, Fab light chain, ...
Authors:Filippova, E.V, Kossiakoff, A.A.
Deposit date:2023-06-12
Release date:2023-11-29
Last modified:2024-01-03
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Engineered antigen-binding fragments for enhanced crystallization of antibody:antigen complexes.
Protein Sci., 33, 2024
8T57
DownloadVisualize
BU of 8t57 by Molmil
Structure of mechanically activated ion channel OSCA2.3 in peptidiscs
Descriptor: CHOLESTEROL, CSC1-like protein HYP1, PALMITIC ACID
Authors:Jojoa-Cruz, S, Burendei, B, Lee, W.H, Ward, A.B.
Deposit date:2023-06-12
Release date:2023-12-27
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Structure of mechanically activated ion channel OSCA2.3 reveals mobile elements in the transmembrane domain.
Structure, 32, 2024
8T56
DownloadVisualize
BU of 8t56 by Molmil
Structure of mechanically activated ion channel OSCA1.2 in peptidiscs
Descriptor: 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine, CHOLESTEROL, CHOLESTEROL HEMISUCCINATE, ...
Authors:Burendei, B, Jojoa-Cruz, S, Lee, W.H, Ward, A.B.
Deposit date:2023-06-12
Release date:2023-12-27
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structure of mechanically activated ion channel OSCA2.3 reveals mobile elements in the transmembrane domain.
Structure, 32, 2024
8T55
DownloadVisualize
BU of 8t55 by Molmil
Co-crystal structure of the WD-repeat domain of human WDR91 in complex with MR46654
Descriptor: 1,2-ETHANEDIOL, N-[3-(4-chlorophenyl)oxetan-3-yl]-1-propanoyl-1,2,3,4-tetrahydroquinoline-5-carboxamide, WD repeat-containing protein 91
Authors:Ahmad, H, Zeng, H, Dong, A, Li, Y, Yen, H, Seitova, A, Xu, J, Feng, J.W, Brown, P.J, Santhakumar, V, Ackloo, S, Arrowsmith, C.H, Edwards, A.M, Halabelian, L, Structural Genomics Consortium (SGC)
Deposit date:2023-06-12
Release date:2023-07-05
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Discovery of a First-in-Class Small-Molecule Ligand for WDR91 Using DNA-Encoded Chemical Library Selection Followed by Machine Learning.
J.Med.Chem., 66, 2023
8T53
DownloadVisualize
BU of 8t53 by Molmil
S. enterica WbaP in a styrene maleic acid liponanoparticle
Descriptor: Undecaprenyl-phosphate galactose phosphotransferase
Authors:Dodge, G.J, Imperiali, B.
Deposit date:2023-06-12
Release date:2024-02-14
Last modified:2024-02-28
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Mapping the architecture of the initiating phosphoglycosyl transferase from S. enterica O-antigen biosynthesis in a liponanoparticle.
Elife, 12, 2024
8T52
DownloadVisualize
BU of 8t52 by Molmil
HIV-1 Integrase Catalytic Core Domain (CCD) F185H/Y99H/A128T Mutant Complexed with EKC-110
Descriptor: (2S)-tert-butoxy{4-(4-chlorophenyl)-2,6-dimethyl-1-[(1-methyl-1H-pyrazol-4-yl)methyl]-1H-pyrrolo[2,3-b]pyridin-5-yl}acetic acid, Integrase
Authors:Dinh, T, Kvaratskhelia, M.
Deposit date:2023-06-12
Release date:2024-06-19
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:HIV-1 Integrase Catalytic Core Domain (CCD) Y99H/A128T mutant complexed with BKC-110
To Be Published
8T51
DownloadVisualize
BU of 8t51 by Molmil
Crystal structure of Fab 3.10C2 bound to TREM2
Descriptor: 3.10C2 Fab heavy chain, 3.10C2 Fab light chain, ACETATE ION, ...
Authors:Hsu, P.L, Wallweber, H.
Deposit date:2023-06-12
Release date:2024-06-19
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Rapid affinity optimization of an anti-TREM2 clinical lead antibody by cross-lineage immune repertoire mining
To Be Published
8T4Y
DownloadVisualize
BU of 8t4y by Molmil
Human HCN1 F186C S264C C309A bound to cAMP, reconstituted in LMNG + SPL
Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1
Authors:Burtscher, V, Mount, J, Cowgill, J, Chang, Y, Bickel, K, Yuan, P, Chanda, B.
Deposit date:2023-06-12
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (3.58 Å)
Cite:Structural Basis for Hyperpolarization-dependent Opening of the Human HCN1 Channel
To Be Published
8T4V
DownloadVisualize
BU of 8t4v by Molmil
Crystal structure of compound 1 bound to K-Ras(G12D)
Descriptor: 4-{(1R,5S)-3-[(7P)-7-(8-ethynylnaphthalen-1-yl)-8-fluoro-2-{[(4s,7as)-tetrahydro-1H-pyrrolizin-7a(5H)-yl]methoxy}pyrido[4,3-d]pyrimidin-4-yl]-3,8-diazabicyclo[3.2.1]octan-8-yl}-4-oxobutanoic acid, GTPase KRas, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Zhang, Z, Zheng, Q, Guiley, K.Z, Shokat, K.M.
Deposit date:2023-06-10
Release date:2024-03-13
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Strain-release alkylation of Asp12 enables mutant selective targeting of K-Ras-G12D.
Nat.Chem.Biol., 2024
8T4T
DownloadVisualize
BU of 8t4t by Molmil
Crystal structure of LC3A in complex with the LIR of TP53INP2/DOR
Descriptor: Tumor protein p53-inducible nuclear protein 2,Microtubule-associated proteins 1A/1B light chain 3A chimera
Authors:Ali, M.G.H, Wahba, H.M, Cyr, N, Omichinski, J.G.
Deposit date:2023-06-10
Release date:2024-05-22
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.359 Å)
Cite:Structural and functional characterization of the role of acetylation on the interactions of the human Atg8-family proteins with the autophagy receptor TP53INP2/DOR.
Autophagy, 2024
8T4S
DownloadVisualize
BU of 8t4s by Molmil
MERS-CoV Nsp1 protein bound to the Human 40S Ribosomal subunit
Descriptor: 18S rRNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ...
Authors:Devarkar, S.C, Xiong, Y.
Deposit date:2023-06-09
Release date:2023-10-04
Last modified:2023-10-11
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Structural basis for translation inhibition by MERS-CoV Nsp1 reveals a conserved mechanism for betacoronaviruses.
Cell Rep, 42, 2023
8T4R
DownloadVisualize
BU of 8t4r by Molmil
RAG2-PHD finger in complex with H3K4tBuNle peptide
Descriptor: H3 histone peptide, V(D)J recombination-activating protein 2, ZINC ION
Authors:Kean, K.M, Travis, C.R, Waters, M.L.
Deposit date:2023-06-09
Release date:2024-02-14
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Trimethyllysine Reader Proteins Exhibit Widespread Charge-Agnostic Binding via Different Mechanisms to Cationic and Neutral Ligands.
J.Am.Chem.Soc., 146, 2024
8T4P
DownloadVisualize
BU of 8t4p by Molmil
Human mitochondrial serine hydroxymethyltransferase (SHMT2) in complex with PLP, glycine and di-glutamate AGF347 inhibitor
Descriptor: N-GLYCINE-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YL-METHANE], N-{4-[4-(2-amino-4-oxo-3,4-dihydro-5H-pyrrolo[3,2-d]pyrimidin-5-yl)butyl]-2-fluorobenzoyl}-L-gamma-glutamyl-L-glutamic acid, Serine hydroxymethyltransferase, ...
Authors:Katinas, J.M, Dann III, C.E.
Deposit date:2023-06-09
Release date:2024-02-21
Method:X-RAY DIFFRACTION (2.801 Å)
Cite:Structural Characterization of 5-Substituted Pyrrolo[3,2- d ]pyrimidine Antifolate Inhibitors in Complex with Human Serine Hydroxymethyl Transferase 2.
Biochemistry, 2024
8T4O
DownloadVisualize
BU of 8t4o by Molmil
Human mitochondrial serine hydroxymethyltransferase (SHMT2) in complex with PLP, glycine and AGF347 inhibitor with no glutamate
Descriptor: 4-[4-(2-amino-4-oxo-3,4-dihydro-5H-pyrrolo[3,2-d]pyrimidin-5-yl)butyl]-2-fluorobenzoic acid, N-GLYCINE-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YL-METHANE], Serine hydroxymethyltransferase, ...
Authors:Katinas, J.M, Dann III, C.E.
Deposit date:2023-06-09
Release date:2024-02-21
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Structural Characterization of 5-Substituted Pyrrolo[3,2- d ]pyrimidine Antifolate Inhibitors in Complex with Human Serine Hydroxymethyl Transferase 2.
Biochemistry, 2024
8T4N
DownloadVisualize
BU of 8t4n by Molmil
DB1976 Bound to the DNA Sequence 5'-CGCGAATTCGCG-3
Descriptor: (2M,2'M)-2,2'-(selenophene-2,5-diyl)di(1H-benzimidazole-6-carboximidamide), DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')
Authors:Terrell, J.R, Poon, G.M.K, Wilson, W.D.
Deposit date:2023-06-09
Release date:2024-06-12
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Structural studies on the PU.1 inhibitory mechanism by diamidine minor groove binders
To Be Published
8T4M
DownloadVisualize
BU of 8t4m by Molmil
Closed human HCN1 F186C S264C bound to cAMP, reconstituted in LMNG + SPL
Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1
Authors:Burtscher, V, Mount, J, Cowgill, J, Chang, Y, Bickel, K, Yuan, P, Chanda, B.
Deposit date:2023-06-09
Release date:2024-06-12
Method:ELECTRON MICROSCOPY (3.16 Å)
Cite:Structural Basis for Hyperpolarization-dependent Opening of the Human HCN1 Channel
To Be Published
8T4L
DownloadVisualize
BU of 8t4l by Molmil
MD65 N332-GT5 SOSIP in complex with RM_N332_07 Fab and RM20A3 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, MD65 N332-GT5 SOSIP gp120, ...
Authors:Ozorowski, G, Torres, J.L, Ward, A.B.
Deposit date:2023-06-09
Release date:2024-05-08
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Vaccine priming of rare HIV broadly neutralizing antibody precursors in nonhuman primates.
Science, 384, 2024
8T4K
DownloadVisualize
BU of 8t4k by Molmil
MD64 N332-GT5 SOSIP
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, MD64 N332-GT5 SOSIP gp120, ...
Authors:Ozorowski, G, Torres, J.L, Ward, A.B.
Deposit date:2023-06-09
Release date:2024-05-08
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Vaccine priming of rare HIV broadly neutralizing antibody precursors in nonhuman primates.
Science, 384, 2024
8T4J
DownloadVisualize
BU of 8t4j by Molmil
Transporter associated with antigen processing (TAP) bound to the 14-mer peptide LPAVVGLSPGEQEY
Descriptor: Antigen peptide transporter 1, Antigen peptide transporter 2, HLA-B35 specific peptide
Authors:Lee, J, Oldham, M.L, Chen, J.
Deposit date:2023-06-09
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Transporter associated with antigen processing (TAP) bound to the 14-mer peptide LPAVVGLSPGEQEY
To Be Published
8T4I
DownloadVisualize
BU of 8t4i by Molmil
Transporter associated with antigen processing (TAP) bound to the 7-mer peptide RRYSTEL
Descriptor: Antigen peptide transporter 1, Antigen peptide transporter 2, Synthetic 7-mer peptide
Authors:Lee, J, Oldham, M.L, Chen, J.
Deposit date:2023-06-09
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (5.1 Å)
Cite:Transporter associated with antigen processing (TAP) bound to the 7-mer peptide RRYSTEL
To Be Published
8T4H
DownloadVisualize
BU of 8t4h by Molmil
Transporter associated with antigen processing (TAP) bound to the 8-mer peptide RRYQSTEL
Descriptor: Antigen peptide transporter 1, Antigen peptide transporter 2, Synthetic 8-mer peptide
Authors:Lee, J, Chen, J.
Deposit date:2023-06-09
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Transporter associated with antigen processing (TAP) bound to the 8-mer peptide RRYQSTEL
To Be Published
8T4G
DownloadVisualize
BU of 8t4g by Molmil
Transporter associated with antigen processing (TAP) bound to the 9-mer peptide QYDDAVYKL
Descriptor: Antigen peptide transporter 1, Antigen peptide transporter 2, HLA-C4 specific peptide
Authors:Lee, J, Oldham, M.L, Chen, J.
Deposit date:2023-06-09
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Transporter associated with antigen processing (TAP) bound to the 9-mer peptide QYDDAVYKL
To Be Published
8T4F
DownloadVisualize
BU of 8t4f by Molmil
Transporter associated with antigen processing (TAP) bound to the 9-mer peptide RRYQKSTEL
Descriptor: Antigen peptide transporter 1, Antigen peptide transporter 2, Histone H3.3C peptide
Authors:Lee, J, Oldham, M.L, Chen, J.
Deposit date:2023-06-09
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Transporter associated with antigen processing (TAP) bound to the 9-mer peptide RRYQKSTEL
To Be Published
8T4E
DownloadVisualize
BU of 8t4e by Molmil
Transporter associated with antigen processing (TAP) bound to the 9-mer peptide ILKEPVHGV
Descriptor: Antigen peptide transporter 1, Antigen peptide transporter 2, Transframe peptide
Authors:Lee, J, Oldham, M.L, Chen, J.
Deposit date:2023-06-09
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Transporter associated with antigen processing (TAP) bound to the 9-mer peptide ILKEPVHGV
To Be Published
8T4D
DownloadVisualize
BU of 8t4d by Molmil
MD65 N332-GT5 SOSIP in complex with RM_N332_08 Fab and RM20A3 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, MD65 N332-GT5 SOSIP gp120, ...
Authors:Ozorowski, G, Torres, J.L, Ward, A.B.
Deposit date:2023-06-09
Release date:2024-05-08
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Vaccine priming of rare HIV broadly neutralizing antibody precursors in nonhuman primates.
Science, 384, 2024

221716

数据于2024-06-26公开中

PDB statisticsPDBj update infoContact PDBjnumon