Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

5O3S
DownloadVisualize
BU of 5o3s by Molmil
Carbon regulatory PII-like protein SbtB from Synechocystis sp. 6803 in Apo state, hexagonal crystal form
Descriptor: Membrane-associated protein slr1513
Authors:Selim, K.A, Albrecht, R, Forchhammer, K, Hartmann, M.D.
Deposit date:2017-05-24
Release date:2018-05-16
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:PII-like signaling protein SbtB links cAMP sensing with cyanobacterial inorganic carbon response.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
3EN0
DownloadVisualize
BU of 3en0 by Molmil
The Structure of Cyanophycinase
Descriptor: Cyanophycinase, SULFATE ION
Authors:Kimber, M.S, Law, A.M, Lai, S.W.S, Tavares, J.
Deposit date:2008-09-25
Release date:2009-07-28
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The structural basis of beta-peptide-specific cleavage by the serine protease cyanophycinase.
J.Mol.Biol., 392, 2009
8H67
DownloadVisualize
BU of 8h67 by Molmil
type I-B Cascade bound to a PAM-containing dsDNA target at 3.8 angstrom resolution.
Descriptor: CRISPR RNA, CRISPR associated protein Cas11b, CRISPR associated protein Cas5, ...
Authors:Xiao, Y, Lu, M, Yu, C, Zhang, Y.
Deposit date:2022-10-15
Release date:2024-05-01
Last modified:2025-05-28
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure and genome editing of type I-B CRISPR-Cas.
Nat Commun, 15, 2024
5NPL
DownloadVisualize
BU of 5npl by Molmil
Crystal structure of hexameric CBS-CP12 protein from bloom-forming cyanobacteria, Yb-derivative at 2.8 A resolution
Descriptor: 10-((2R)-2-HYDROXYPROPYL)-1,4,7,10-TETRAAZACYCLODODECANE 1,4,7-TRIACETIC ACID, Similar to tr|Q8YYT1|Q8YYT1, YTTERBIUM (III) ION
Authors:Hackenberg, C, Hakanpaa, J, Antonyuk, S.V, Dittmann, E, Lamzin, V.S.
Deposit date:2017-04-17
Release date:2018-05-30
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Structural and functional insights into the unique CBS-CP12 fusion protein family in cyanobacteria.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
8HJA
DownloadVisualize
BU of 8hja by Molmil
The crystal structure of syn_CdgR-(c-di-GMP) from Synechocystis sp. PCC 6803
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), c-di-GMP receptor
Authors:Zeng, X, Peng, Y.J.
Deposit date:2022-11-22
Release date:2023-03-29
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:A c-di-GMP binding effector controls cell size in a cyanobacterium.
Proc.Natl.Acad.Sci.USA, 120, 2023
5M82
DownloadVisualize
BU of 5m82 by Molmil
Three-dimensional structure of the photoproduct state of GAF3 from Slr1393 of Synechocystis sp. PCC6803
Descriptor: (2S)-3-(cyclohexylamino)-2-hydroxypropane-1-sulfonic acid, PHYCOCYANOBILIN, SODIUM ION, ...
Authors:Xu, X.-L, Zhao, K.-H, Gaertner, W, Hoeppner, A.
Deposit date:2016-10-28
Release date:2017-12-20
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Structural elements regulating the photochromicity in a cyanobacteriochrome
Proc.Natl.Acad.Sci.USA, 2020
3MZI
DownloadVisualize
BU of 3mzi by Molmil
Crystallographic structure of the pseudo-Signaling State of the BLUF Photoreceptor PixD (slr1694) Y8F mutant
Descriptor: Activator of photopigment and puc expression, FLAVIN MONONUCLEOTIDE
Authors:Yuan, H, Bauer, C.E.
Deposit date:2010-05-12
Release date:2011-08-31
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.304 Å)
Cite:Mutational and Structural Studies of the PixD BLUF Output Signal That Affects Light-Regulated Interactions with PixE.
Biochemistry, 50, 2011
5NMU
DownloadVisualize
BU of 5nmu by Molmil
Structure of hexameric CBS-CP12 protein from bloom-forming cyanobacteria
Descriptor: CBS-CP12, CHLORIDE ION
Authors:Hackenberg, C, Hakanpaa, J, Antonyuk, S.V, Dittmann, E, Lamzin, V.S.
Deposit date:2017-04-07
Release date:2018-05-16
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural and functional insights into the unique CBS-CP12 fusion protein family in cyanobacteria.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5M85
DownloadVisualize
BU of 5m85 by Molmil
Three-dimensional structure of the intermediate state of GAF3 from Slr1393 of Synechocystis sp. PCC6803
Descriptor: (2S)-3-(cyclohexylamino)-2-hydroxypropane-1-sulfonic acid, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, PHYCOCYANOBILIN, ...
Authors:Xu, X.-L, Zhao, K.-H, Gaertner, W, Hoeppner, A.
Deposit date:2016-10-28
Release date:2017-12-20
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural elements regulating the photochromicity in a cyanobacteriochrome
Proc.Natl.Acad.Sci.USA, 2020
5O3Q
DownloadVisualize
BU of 5o3q by Molmil
Carbon regulatory PII-like protein SbtB from Synechocystis sp. 6803 in complex with cyclic AMP (cAMP)
Descriptor: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, BICARBONATE ION, Membrane-associated protein slr1513
Authors:Selim, K.A, Albrecht, R, Forchhammer, K, Hartmann, M.D.
Deposit date:2017-05-24
Release date:2018-05-16
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:PII-like signaling protein SbtB links cAMP sensing with cyanobacterial inorganic carbon response.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5XNJ
DownloadVisualize
BU of 5xnj by Molmil
Crystal structure of Microcystis aeruginosa PCC 7806 aspartate/glutamate racemase in complex with L-glutamate
Descriptor: GLUTAMIC ACID, McyF
Authors:Cao, D.D, Zhou, K, Jiang, Y.L, Zhou, C.Z.
Deposit date:2017-05-23
Release date:2018-05-30
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.82 Å)
Cite:Structure-function Analyses of a Cyanobacterial Aspartate/Glutamate Racemase Reveal Its Catalytic Mechanism and Substrate Specificity
To Be Published
1G3W
DownloadVisualize
BU of 1g3w by Molmil
CD-CYS102SER DTXR
Descriptor: CADMIUM ION, DIPHTHERIA TOXIN REPRESSOR, SULFATE ION
Authors:Pohl, E, Goranson-Siekierke, J, Holmes, R.K, Hol, W.G.J.
Deposit date:2000-10-25
Release date:2001-10-25
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structures of three diphtheria toxin repressor (DtxR) variants with decreased repressor activity.
Acta Crystallogr.,Sect.D, 57, 2001
1VCE
DownloadVisualize
BU of 1vce by Molmil
Crystal structure of project ID PH0725 from Pyrococcus horikoshii OT3
Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, diphthine synthase
Authors:Kunishima, N, Shimizu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-03-07
Release date:2005-03-29
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of diphthine synthase from Pyrococcus horikoshii OT3
To be Published
1RJG
DownloadVisualize
BU of 1rjg by Molmil
Structure of PPM1, a leucine carboxy methyltransferase involved in the regulation of protein phosphatase 2A activity
Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, carboxy methyl transferase for protein phosphatase 2A catalytic subunit
Authors:Leulliot, N, Quevillon-Cheruel, S, Sorel, I, Li de La Sierra-Gallay, I, Collinet, B, Graille, M, Blondeau, K, Bettache, N, Poupon, A, Janin, J, van Tilbeurgh, H.
Deposit date:2003-11-19
Release date:2003-12-02
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Structure of protein phosphatase methyltransferase 1 (PPM1), a leucine carboxyl methyltransferase involved in the regulation of protein phosphatase 2A activity
J.Biol.Chem., 279, 2004
2P35
DownloadVisualize
BU of 2p35 by Molmil
Crystal structure of trans-aconitate methyltransferase from Agrobacterium tumefaciens
Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, Trans-aconitate 2-methyltransferase
Authors:Chang, C, Xu, X, Zheng, H, Savchenko, A, Edwards, A.M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2007-03-08
Release date:2007-04-10
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of trans-aconitate methyltransferase from Agrobacterium tumefaciens
To be Published
6CPD
DownloadVisualize
BU of 6cpd by Molmil
Crystal structure of PmoD soluble domain from Methylocystis sp. ATCC 49242 (Rockwell)
Descriptor: COPPER (I) ION, PmoD, SULFATE ION
Authors:Fisher, O.S, Rosenzweig, A.C.
Deposit date:2018-03-13
Release date:2018-10-31
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.903 Å)
Cite:Characterization of a long overlooked copper protein from methane- and ammonia-oxidizing bacteria.
Nat Commun, 9, 2018
2M7T
DownloadVisualize
BU of 2m7t by Molmil
Solution NMR Structure of Engineered Cystine Knot Protein 2.5D
Descriptor: Cystine Knot Protein 2.5D
Authors:Cochran, F.V, Das, R.
Deposit date:2013-04-30
Release date:2014-05-07
Last modified:2024-10-16
Method:SOLUTION NMR
Cite:Challenging the state of the art in protein structure prediction: Highlights of experimental target structures for the 10th Critical Assessment of Techniques for Protein Structure Prediction Experiment CASP10.
Proteins, 82 Suppl 2, 2014
5ZBF
DownloadVisualize
BU of 5zbf by Molmil
Crystal structure of 4-hydroxyphenylpyruvic acid bound AerE from Microcystis aeruginosa
Descriptor: 3-(4-HYDROXY-PHENYL)PYRUVIC ACID, Cupin domain protein, FE (II) ION
Authors:Qiu, X, Zhu, W.
Deposit date:2018-02-11
Release date:2019-02-13
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural and functional insights into the role of a cupin superfamily isomerase in the biosynthesis of Choi moiety of aeruginosin.
J. Struct. Biol., 205, 2019
4JWH
DownloadVisualize
BU of 4jwh by Molmil
Crystal structure of spTrm10(Full length)-SAH complex
Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, tRNA (guanine(9)-N1)-methyltransferase
Authors:Yan, W, Shao, Z.
Deposit date:2013-03-27
Release date:2013-10-16
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Crystal structure of tRNA m1G9 methyltransferase Trm10: insight into the catalytic mechanism and recognition of tRNA substrate.
Nucleic Acids Res., 42, 2014
4FSX
DownloadVisualize
BU of 4fsx by Molmil
crystal structure of Se-substituted Zea mays ZMET2 in complex with SAH
Descriptor: DNA (cytosine-5)-methyltransferase 1, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Du, J, Patel, D.J.
Deposit date:2012-06-27
Release date:2012-10-17
Last modified:2024-11-27
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Dual Binding of Chromomethylase Domains to H3K9me2-Containing Nucleosomes Directs DNA Methylation in Plants.
Cell(Cambridge,Mass.), 151, 2012
2P6K
DownloadVisualize
BU of 2p6k by Molmil
Crystal structure of PH0725 from Pyrococcus horikoshii OT3
Descriptor: S-ADENOSYL-L-HOMOCYSTEINE, SULFATE ION, diphthine synthase
Authors:Yamamoto, H, Matsuura, Y, Ono, N, Nakamoto, T, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-18
Release date:2007-09-18
Last modified:2025-04-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of PH0725 from Pyrococcus horikoshii OT3
To be Published
6T6K
DownloadVisualize
BU of 6t6k by Molmil
Y201W mutant of the orange carotenoid protein from Synechocystis at pH 6.5
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, GLYCINE, ...
Authors:Sluchanko, N.N, Gushchin, I, Botnarevskiy, V.S, Slonimskiy, Y.B, Remeeva, A, Kovalev, K, Stepanov, A.V, Gordeliy, V, Maksimov, E.G.
Deposit date:2019-10-18
Release date:2020-11-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Role of hydrogen bond alternation and charge transfer states in photoactivation of the Orange Carotenoid Protein.
Commun Biol, 4, 2021
1G3S
DownloadVisualize
BU of 1g3s by Molmil
CYS102SER DTXR
Descriptor: DIPHTHERIA TOXIN REPRESSOR
Authors:Pohl, E, Goranson-Siekierke, J, Holmes, R.K, Hol, W.G.J.
Deposit date:2000-10-25
Release date:2001-10-25
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structures of three diphtheria toxin repressor (DtxR) variants with decreased repressor activity.
Acta Crystallogr.,Sect.D, 57, 2001
4B0I
DownloadVisualize
BU of 4b0i by Molmil
Crystal Structure of 3-hydroxydecanoyl-Acyl Carrier Protein Dehydratase (FabA) mutant (H70N) from Pseudomonas aeruginosa in complex with 3-hydroxydecanoyl-N-acetyl cysteamine
Descriptor: 3-HYDROXYDECANOYL-[ACYL-CARRIER-PROTEIN] DEHYDRATASE, S-[2-(acetylamino)ethyl] (3R)-3-hydroxydecanethioate
Authors:Moynie, L, McMahon, S.A, Leckie, S.M, Duthie, F.G, Koehnke, A, Naismith, J.H.
Deposit date:2012-07-02
Release date:2012-11-28
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Structural Insights Into the Mechanism and Inhibition of the Beta-Hydroxydecanoyl-Acyl Carrier Protein Dehydratase from Pseudomonas Aeruginosa
J.Mol.Biol., 425, 2013
1DBX
DownloadVisualize
BU of 1dbx by Molmil
Crystal structure of cysteinyl-tRNA(Pro) deacylase from H. influenzae (HI1434)
Descriptor: cysteinyl-tRNA(Pro) deacylase
Authors:Zhang, H, Huang, K, Li, Z, Herzberg, O, Structure 2 Function Project (S2F)
Deposit date:1999-11-03
Release date:2000-06-14
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of YbaK protein from Haemophilus influenzae (HI1434) at 1.8 A resolution: functional implications.
Proteins, 40, 2000

238582

数据于2025-07-09公开中

PDB statisticsPDBj update infoContact PDBjnumon