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5LXJ
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BU of 5lxj by Molmil
Solution NMR structure of the X domain of Peste des Petits Ruminants phosphoprotein
Descriptor: Phosphoprotein
Authors:Pereira, N, Piuzzi, M, Bontems, F, Eleouet, J.-F, Sizun, C.
Deposit date:2016-09-21
Release date:2017-10-25
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Solution structure of the X domain of Peste des Petits Ruminants Virus phosphoprotein and interaction with the nucleoprotein
To Be Published
2DVI
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BU of 2dvi by Molmil
Complex structure of CCA-adding enzyme, mini-DCC and CTP
Descriptor: CCA-adding enzyme, CYTIDINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Tomita, K, Ishitani, R, Fukai, S, Nureki, O.
Deposit date:2006-07-31
Release date:2006-11-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Complete crystallographic analysis of the dynamics of CCA sequence addition
Nature, 443, 2006
6HWT
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BU of 6hwt by Molmil
Crystal structure of p38alpha in complex with a reduced photoswitchable 2-Azothiazol-based Inhibitor (compound 31)
Descriptor: 3-(2,5-dimethoxyphenyl)-~{N}-[4-[4-(4-fluorophenyl)-2-(2-phenylhydrazinyl)-1,3-thiazol-5-yl]pyridin-2-yl]propanamide, Mitogen-activated protein kinase 14, octyl beta-D-glucopyranoside
Authors:Mueller, M.P, Rauh, D.
Deposit date:2018-10-15
Release date:2019-04-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:2-Azo-, 2-diazocine-thiazols and 2-azo-imidazoles as photoswitchable kinase inhibitors: limitations and pitfalls of the photoswitchable inhibitor approach.
Photochem. Photobiol. Sci., 18, 2019
2DOR
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BU of 2dor by Molmil
DIHYDROOROTATE DEHYDROGENASE A FROM LACTOCOCCUS LACTIS COMPLEXED WITH OROTATE
Descriptor: DIHYDROOROTATE DEHYDROGENASE A, FLAVIN MONONUCLEOTIDE, OROTIC ACID
Authors:Rowland, P, Larsen, S.
Deposit date:1998-05-11
Release date:1998-08-12
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:The crystal structure of Lactococcus lactis dihydroorotate dehydrogenase A complexed with the enzyme reaction product throws light on its enzymatic function.
Protein Sci., 7, 1998
2EEW
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BU of 2eew by Molmil
Guanine Riboswitch U47C mutant bound to hypoxanthine
Descriptor: ACETATE ION, COBALT HEXAMMINE(III), Guanine riboswitch, ...
Authors:Gilbert, S.D, Love, C.E, Batey, R.T.
Deposit date:2007-02-19
Release date:2007-11-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Mutational analysis of the purine riboswitch aptamer domain
Biochemistry, 46, 2007
2EF4
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BU of 2ef4 by Molmil
Crystal structure of the arginase from thermus thermophilus
Descriptor: Arginase
Authors:Kumarevel, T.S, Karthe, P, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-02-20
Release date:2007-04-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the arginase from thermus thermophilus
To be Published
2EIV
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BU of 2eiv by Molmil
Crystal Structure of the arginase from Thermus thermophilus
Descriptor: Arginase
Authors:Kumarevel, T.S, Karthe, P, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-13
Release date:2007-09-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.91 Å)
Cite:Crystal Structure of the arginase from Thermus thermophilus
To be Published
5MPZ
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BU of 5mpz by Molmil
Crystal structure of CREBBP bromodomain complexed with CBP007
Descriptor: CREB-binding protein, methyl 2-oxidanylidene-3~{H}-1,3-benzoxazole-6-carboxylate
Authors:Zhu, J, Spiliotopoulos, D, Caflisch, A.
Deposit date:2016-12-19
Release date:2017-05-10
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Virtual screen to NMR (VS2NMR): Discovery of fragment hits for the CBP bromodomain.
Bioorg. Med. Chem. Lett., 27, 2017
5MQG
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BU of 5mqg by Molmil
Crystal structure of CREBBP bromodomain complexed with CBP015
Descriptor: 1-(4-azanyl-3-methoxy-phenyl)ethanone, CREB-binding protein
Authors:Zhu, J, Spiliotopoulos, D, Caflisch, A.
Deposit date:2016-12-20
Release date:2017-04-19
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Virtual screen to NMR (VS2NMR): Discovery of fragment hits for the CBP bromodomain.
Bioorg. Med. Chem. Lett., 27, 2017
2EIZ
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BU of 2eiz by Molmil
Crystal structure of humanized HYHEL-10 fv mutant(HW47Y)-hen lysozyme complex
Descriptor: ANTI-LYSOZYME ANTIBODY FV REGION, Lysozyme C
Authors:Nakanishi, T, Tsumoto, K, Yokota, A, Kondo, H, Kumagai, I.
Deposit date:2007-03-14
Release date:2008-03-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Critical contribution of VH-VL interaction to reshaping of an antibody: the case of humanization of anti-lysozyme antibody, HyHEL-10
Protein Sci., 17, 2008
2E5L
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BU of 2e5l by Molmil
A snapshot of the 30S ribosomal subunit capturing mRNA via the Shine- Dalgarno interaction
Descriptor: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Kaminishi, T, Wilson, D.N, Takemoto, C, Harms, J.M, Kawazoe, M, Schluenzen, F, Hanawa-Suetsugu, K, Shirouzu, M, Fucini, P, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-12-21
Release date:2007-05-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:A snapshot of the 30S ribosomal subunit capturing mRNA via the Shine-Dalgarno interaction
Structure, 15, 2007
2E9W
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BU of 2e9w by Molmil
Crystal structure of the extracellular domain of Kit in complex with stem cell factor (SCF)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Kit ligand, Mast/stem cell growth factor receptor
Authors:Yuzawa, S, Opatowsky, Y, Zhang, Z, Mandiyan, V, Lax, I, Schlessinger, J.
Deposit date:2007-01-27
Release date:2007-08-07
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structural Basis for Activation of the Receptor Tyrosine Kinase KIT by Stem Cell Factor
Cell(Cambridge,Mass.), 130, 2007
8J48
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BU of 8j48 by Molmil
Crystal structure of OY phytoplasma SAP05 in complex with AtGATA18
Descriptor: GATA transcription factor 18, Sequence-variable mosaic (SVM) signal sequence domain-containing protein, ZINC ION
Authors:Dong, C, Yan, X, Yuan, X.
Deposit date:2023-04-19
Release date:2024-02-28
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Molecular basis of SAP05-mediated ubiquitin-independent proteasomal degradation of transcription factors.
Nat Commun, 15, 2024
5MG0
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BU of 5mg0 by Molmil
Structure of PAS-GAF fragment of Deinococcus phytochrome by serial femtosecond crystallography
Descriptor: 1,2-ETHANEDIOL, 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium -2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3- yl]propanoic acid, Bacteriophytochrome, ...
Authors:Burgie, E.S, Fuller, F.D, Gul, S, Miller, M.D, Young, I.D, Brewster, A.S, Clinger, J, Aller, P, Braeuer, P, Hutchison, C, Alonso-Mori, R, Kern, J, Yachandra, V.K, Yano, J, Sauter, N.K, Phillips Jr, G.N, Vierstra, R.D, Orville, A.M.
Deposit date:2016-11-20
Release date:2017-02-22
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Drop-on-demand sample delivery for studying biocatalysts in action at X-ray free-electron lasers.
Nat. Methods, 14, 2017
8IQN
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BU of 8iqn by Molmil
Crystal structure of the human vitamin D receptor ligand binding domain complexed with 24,24-F2-25(OH)D3
Descriptor: (1~{S},3~{Z})-3-[(2~{E})-2-[(1~{R},3~{a}~{S},7~{a}~{R})-1-[(2~{R})-5,5-bis(fluoranyl)-6-methyl-6-oxidanyl-heptan-2-yl]-7~{a}-methyl-2,3,3~{a},5,6,7-hexahydro-1~{H}-inden-4-ylidene]ethylidene]-4-methylidene-cyclohexan-1-ol, Vitamin D3 receptor
Authors:Kakuda, S.
Deposit date:2023-03-17
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.639 Å)
Cite:Crystal structure of the human vitamin D receptor ligand binding domain complexed with 24,24-F2-25(OH)D3
To Be Published
5J8Y
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BU of 5j8y by Molmil
Crystal structure of the Scm-SAM and Sfmbt-SAM heterodimer
Descriptor: Polycomb protein Scm, Polycomb protein Sfmbt
Authors:Frey, F, Benda, C, Mueller, J.
Deposit date:2016-04-08
Release date:2016-05-18
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Molecular basis of PRC1 targeting to Polycomb response elements by PhoRC.
Genes Dev., 30, 2016
2EBE
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BU of 2ebe by Molmil
Crystal structure of Lys11 to Met mutant of hypothetical protein from Thermus thermophilus
Descriptor: Hypothetical protein TTHA0061
Authors:Kumarevel, T.S, Kuramitsu, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-02-08
Release date:2007-08-14
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of Lys11 to Met mutant of hypothetical protein from Thermus thermophilus
To be Published
2EES
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BU of 2ees by Molmil
Guanine riboswitch A21U, U75A mutant bound to hypoxanthine
Descriptor: ACETATE ION, COBALT HEXAMMINE(III), Guanine riboswitch, ...
Authors:Gilbert, S.D, Edwards, A.L, Batey, R.T.
Deposit date:2007-02-18
Release date:2007-11-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Mutational analysis of the purine riboswitch aptamer domain
Biochemistry, 46, 2007
8IQT
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BU of 8iqt by Molmil
Crystal structure of the human vitamin D receptor ligand binding domain complexed with (23R)-F-25(OH)D3
Descriptor: (1~{S},3~{Z})-3-[(2~{E})-2-[(1~{R},3~{a}~{S},7~{a}~{R})-1-[(2~{R},4~{R})-4-fluoranyl-6-methyl-6-oxidanyl-heptan-2-yl]-7~{a}-methyl-2,3,3~{a},5,6,7-hexahydro-1~{H}-inden-4-ylidene]ethylidene]-4-methylidene-cyclohexan-1-ol, Vitamin D3 receptor
Authors:Kakuda, S.
Deposit date:2023-03-17
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.745 Å)
Cite:Crystal structure of the human vitamin D receptor ligand binding domain complexed with (23R)-F-25(OH)D3
To Be Published
6OD0
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BU of 6od0 by Molmil
Structure of human CIB1 in complex with peptide inhibitor UNC10245092
Descriptor: CALCIUM ION, Calcium and integrin-binding protein 1, Peptide inhibitor UNC10245092
Authors:Puhl, A.C, Godoy, A.S, Pearce, K.
Deposit date:2019-03-25
Release date:2020-03-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Discovery and Characterization of Peptide Inhibitors for Calcium and Integrin Binding Protein 1.
Acs Chem.Biol., 15, 2020
1Q87
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BU of 1q87 by Molmil
Crystal structure of the C-domain of the T.vaginalis Inr binding protein, IBP39 (tetragonal form)
Descriptor: 39 kDa initiator binding protein
Authors:Schumacher, M.A, Johnson, P.J.
Deposit date:2003-08-20
Release date:2003-11-18
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Structural Basis of Core Promoter Recognition in a Primitive Eukaryote
Cell(Cambridge,Mass.), 115, 2003
5M6S
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BU of 5m6s by Molmil
folding intermediate of spectrin R16
Descriptor: spectrin
Authors:Nilsson, O.B, Nickson, A.A, Clarke, J.
Deposit date:2016-10-25
Release date:2017-01-11
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:Cotranslational folding of spectrin domains via partially structured states.
Nat. Struct. Mol. Biol., 24, 2017
2EKS
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BU of 2eks by Molmil
Crystal structure of humanized HyHEL-10 FV-HEN lysozyme complex
Descriptor: ANTI-LYSOZYME ANTIBODY FV REGION, Lysozyme C
Authors:Nakanishi, T, Tsumoto, K, Yokota, A, Kondo, H, Kumagai, I.
Deposit date:2007-03-24
Release date:2008-03-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Critical contribution of VH-VL interaction to reshaping of an antibody: the case of humanization of anti-lysozyme antibody, HyHEL-10
Protein Sci., 17, 2008
5MG1
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BU of 5mg1 by Molmil
Structure of the photosensory module of Deinococcus phytochrome by serial femtosecond X-ray crystallography
Descriptor: 3-[2-[(Z)-[3-(2-carboxyethyl)-5-[(Z)-(4-ethenyl-3-methyl-5-oxidanylidene-pyrrol-2-ylidene)methyl]-4-methyl-pyrrol-1-ium -2-ylidene]methyl]-5-[(Z)-[(3E)-3-ethylidene-4-methyl-5-oxidanylidene-pyrrolidin-2-ylidene]methyl]-4-methyl-1H-pyrrol-3- yl]propanoic acid, Bacteriophytochrome
Authors:Burgie, E.S, Fuller, F.D, Gul, S, Young, I.D, Brewster, A.S, Clinger, J, Andi, B, Stan, C, Allaire, M, Nelsen, S, Alonso-Mori, R, Phillips Jr, G.N, Sauter, N.K, Kern, J, Yachandra, V.K, Yano, J, Vierstra, R.D, Orville, A.M.
Deposit date:2016-11-20
Release date:2017-02-22
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Drop-on-demand sample delivery for studying biocatalysts in action at X-ray free-electron lasers.
Nat. Methods, 14, 2017
6OSW
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BU of 6osw by Molmil
An order-to-disorder structural switch activates the FoxM1 transcription factor
Descriptor: Forkhead box M1
Authors:Marceau, A.H, Rubin, S.M, Nerli, S, McShane, A.C, Sgourakis, N.G.
Deposit date:2019-05-02
Release date:2019-05-29
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:An order-to-disorder structural switch activates the FoxM1 transcription factor.
Elife, 8, 2019

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