Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

1KV6
DownloadVisualize
BU of 1kv6 by Molmil
X-ray structure of the orphan nuclear receptor ERR3 ligand-binding domain in the constitutively active conformation
Descriptor: ESTROGEN-RELATED RECEPTOR GAMMA, steroid receptor coactivator 1
Authors:Greschik, H, Wurtz, J.-M, Sanglier, S, Bourguet, W, van Dorsselaer, A, Moras, D, Renaud, J.-P, Structural Proteomics in Europe (SPINE)
Deposit date:2002-01-25
Release date:2003-01-25
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural and Functional Evidence for Ligand-Independent Transcriptional Activation by the Estrogen-Related Receptor 3
Mol.Cell, 9, 2002
6RAR
DownloadVisualize
BU of 6rar by Molmil
Pmar-Lig_PreS3-Mn
Descriptor: ADENOSINE MONOPHOSPHATE, ATP-dependent DNA ligase, DNA (5'-D(*TP*TP*CP*CP*GP*AP*CP*AP*GP*TP*GP*GP*GP*GP*TP*CP*GP*CP*AP*AP*T)-3'), ...
Authors:Leiros, H.K.S, Williamson, A.
Deposit date:2019-04-07
Release date:2019-07-10
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.785 Å)
Cite:Structural intermediates of a DNA-ligase complex illuminate the role of the catalytic metal ion and mechanism of phosphodiester bond formation.
Nucleic Acids Res., 47, 2019
8S6A
DownloadVisualize
BU of 8s6a by Molmil
X-ray structure of Dishevelled 3 PDZ domain in a complex with a class III peptide ligand
Descriptor: C8 peptide, Segment polarity protein dishevelled homolog DVL-3
Authors:Komarek, J, Barinka, C.
Deposit date:2024-02-26
Release date:2025-03-12
Last modified:2025-06-25
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:A class III ligand oscillates between internal and terminal binding modes as it engages with the Dishevelled PDZ domain.
Structure, 2025
2AXA
DownloadVisualize
BU of 2axa by Molmil
Crystal Structure Of The Androgen Receptor Ligand Binding Domain In Complex With S-1
Descriptor: Androgen receptor, S-3-(4-FLUOROPHENOXY)-2-HYDROXY-2-METHYL-N-[4-NITRO-3-(TRIFLUOROMETHYL)PHENYL]PROPANAMIDE
Authors:Bohl, C.E, Miller, D.D, Chen, J, Bell, C.E, Dalton, J.T.
Deposit date:2005-09-03
Release date:2005-09-20
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Basis for Accommodation of Nonsteroidal Ligands in the Androgen Receptor
J.Biol.Chem., 280, 2005
9N39
DownloadVisualize
BU of 9n39 by Molmil
DNA gyrase complexed with uncleaved DNA and Compound 185 to 2.25 A resolution
Descriptor: DNA (5'-D(P*AP*GP*CP*CP*GP*TP*AP*GP*GP*GP*CP*CP*CP*TP*AP*CP*GP*GP*CP*T)-3'), DNA gyrase subunit B fusion with DNA gyrase subunit A, MANGANESE (II) ION, ...
Authors:Bell, C.E, McElroy, C.A, Ratigan, S.C.
Deposit date:2025-01-30
Release date:2025-04-09
Last modified:2025-04-30
Method:X-RAY DIFFRACTION (2.255 Å)
Cite:Structural and Mechanistic Insights into Atypical Bacterial Topoisomerase Inhibitors.
Acs Med.Chem.Lett., 16, 2025
9N26
DownloadVisualize
BU of 9n26 by Molmil
DNA gyrase complexed with uncleaved DNA and Compound 148 to 1.96 A resolution
Descriptor: DNA (5'-D(*AP*GP*CP*CP*GP*TP*AP*GP*GP*GP*CP*CP*CP*TP*AP*CP*GP*GP*CP*T)-3'), DNA gyrase subunit B fusion with DNA gyrase subunit A, MANGANESE (II) ION, ...
Authors:Bell, C.E, McElroy, C.A, Ratigan, S.C.
Deposit date:2025-01-27
Release date:2025-04-09
Last modified:2025-04-30
Method:X-RAY DIFFRACTION (1.963 Å)
Cite:Structural and Mechanistic Insights into Atypical Bacterial Topoisomerase Inhibitors.
Acs Med.Chem.Lett., 16, 2025
6RCE
DownloadVisualize
BU of 6rce by Molmil
Pmar-Lig_PreS3
Descriptor: ADENOSINE MONOPHOSPHATE, ATP-dependent DNA ligase, DNA (5'-D(*TP*TP*CP*CP*GP*AP*CP*AP*GP*TP*GP*GP*GP*GP*TP*CP*GP*CP*AP*AP*T)-3'), ...
Authors:Leiros, H.K.S, Williamson, A.
Deposit date:2019-04-11
Release date:2019-07-10
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.946 Å)
Cite:Structural intermediates of a DNA-ligase complex illuminate the role of the catalytic metal ion and mechanism of phosphodiester bond formation.
Nucleic Acids Res., 47, 2019
2AX7
DownloadVisualize
BU of 2ax7 by Molmil
Crystal Structure Of The Androgen Receptor Ligand Binding Domain T877A Mutant In Complex With S-1
Descriptor: Androgen receptor, S-3-(4-FLUOROPHENOXY)-2-HYDROXY-2-METHYL-N-[4-NITRO-3-(TRIFLUOROMETHYL)PHENYL]PROPANAMIDE
Authors:Bohl, C.E, Miller, D.D, Chen, J, Bell, C.E, Dalton, J.T.
Deposit date:2005-09-03
Release date:2005-09-20
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Basis for Accommodation of Nonsteroidal Ligands in the Androgen Receptor
J.Biol.Chem., 280, 2005
2AX8
DownloadVisualize
BU of 2ax8 by Molmil
Crystal Structure Of The Androgen Receptor Ligand Binding Domain W741L Mutant In Complex With S-1
Descriptor: Androgen receptor, S-3-(4-FLUOROPHENOXY)-2-HYDROXY-2-METHYL-N-[4-NITRO-3-(TRIFLUOROMETHYL)PHENYL]PROPANAMIDE
Authors:Bohl, C.E, Miller, D.D, Chen, J, Bell, C.E, Dalton, J.T.
Deposit date:2005-09-03
Release date:2005-09-20
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural Basis for Accommodation of Nonsteroidal Ligands in the Androgen Receptor
J.Biol.Chem., 280, 2005
9HC0
DownloadVisualize
BU of 9hc0 by Molmil
Dark structure of the human metabotropic glutamate receptor 5 transmembrane domain bound to photoswitchable ligand alloswitch-1
Descriptor: 2-chloranyl-~{N}-[2-methoxy-4-[(~{E})-pyridin-2-yldiazenyl]phenyl]benzamide, Metabotropic glutamate receptor 5,Endolysin, OLEIC ACID
Authors:Kondo, Y, Hatton, C, Cheng, R, Trabuco, M, Glover, H, Bertrand, Q, Stierli, F, Seidel, H.P, Mason, T, Sarma, S, Tellkamp, F, Kepa, M, Dworkowski, F, Mehrabi, P, Hennig, M, Standfuss, J.
Deposit date:2024-11-08
Release date:2025-06-25
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Apo-state structure of the metabotropic glutamate receptor 5 transmembrane domain obtained using a photoswitchable ligand.
Protein Sci., 34, 2025
9HC3
DownloadVisualize
BU of 9hc3 by Molmil
Apo-state structure of the human metabotropic glutamate receptor 5 transmembrane domain freeze-trapped after light activation of photoswitchable ligand alloswitch-1
Descriptor: Metabotropic glutamate receptor 5,Endolysin, OLEIC ACID
Authors:Kondo, Y, Hatton, C, Cheng, R, Trabuco, M, Glover, H, Bertrand, Q, Stierli, F, Seidel, H.P, Mason, T, Sarma, S, Tellkamp, F, Kepa, M, Dworkowski, F, Mehrabi, P, Hennig, M, Standfuss, J.
Deposit date:2024-11-08
Release date:2025-06-25
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Apo-state structure of the metabotropic glutamate receptor 5 transmembrane domain obtained using a photoswitchable ligand.
Protein Sci., 34, 2025
8W4D
DownloadVisualize
BU of 8w4d by Molmil
Crystal structure of the sigma-1 receptor from Xenopus laevis in the absence of known ligands
Descriptor: Sigma non-opioid intracellular receptor 1
Authors:Xiao, Y, Fu, C, Sun, Z, Zhou, X.
Deposit date:2023-08-23
Release date:2024-07-17
Method:X-RAY DIFFRACTION (2.173 Å)
Cite:Insight into binding of endogenous neurosteroid ligands to the sigma-1 receptor.
Nat Commun, 15, 2024
8W4E
DownloadVisualize
BU of 8w4e by Molmil
Crystal structure of the sigma-1 receptor from Xenopus laevis in the absence of known ligands (C2 form)
Descriptor: Sigma non-opioid intracellular receptor 1
Authors:Xiao, Y, Fu, C, Sun, Z, Zhou, X.
Deposit date:2023-08-23
Release date:2024-07-17
Method:X-RAY DIFFRACTION (2.805 Å)
Cite:Insight into binding of endogenous neurosteroid ligands to the sigma-1 receptor.
Nat Commun, 15, 2024
6RAS
DownloadVisualize
BU of 6ras by Molmil
Pmar-Lig_Pre.
Descriptor: ADENOSINE MONOPHOSPHATE, ATP-dependent DNA ligase, DNA, ...
Authors:Leiros, H.K.S, Williamson, A.
Deposit date:2019-04-07
Release date:2019-07-10
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structural intermediates of a DNA-ligase complex illuminate the role of the catalytic metal ion and mechanism of phosphodiester bond formation.
Nucleic Acids Res., 47, 2019
2IOG
DownloadVisualize
BU of 2iog by Molmil
Human estrogen receptor alpha ligand-binding domain in complex with compound 11F
Descriptor: Estrogen receptor, N-[(1R)-3-(4-HYDROXYPHENYL)-1-METHYLPROPYL]-2-[2-PHENYL-6-(2-PIPERIDIN-1-YLETHOXY)-1H-INDOL-3-YL]ACETAMIDE
Authors:Fitzgerald, P.M.D, Sharma, N.
Deposit date:2006-10-10
Release date:2007-10-09
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Estrogen receptor ligands. Part 16: 2-Aryl indoles as highly subtype selective ligands for ERalpha
Bioorg.Med.Chem.Lett., 17, 2007
2IOK
DownloadVisualize
BU of 2iok by Molmil
Human estrogen receptor alpha ligand-binding domain in complex with compound 1D
Descriptor: Estrogen receptor, N-[(1R)-3-(4-HYDROXYPHENYL)-1-METHYLPROPYL]-2-(2-PHENYL-1H-INDOL-3-YL)ACETAMIDE
Authors:Fitzgerald, P.M.D, Sharma, N.
Deposit date:2006-10-10
Release date:2007-10-09
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Estrogen receptor ligands. Part 16: 2-Aryl indoles as highly subtype selective ligands for ERalpha
Bioorg.Med.Chem.Lett., 17, 2007
6MYU
DownloadVisualize
BU of 6myu by Molmil
Avian mitochondrial complex II crystallized in the presence of HQNO
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, DI(HYDROXYETHYL)ETHER, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Berry, E.A, Huang, L.-S.
Deposit date:2018-11-02
Release date:2019-11-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Crystallographic investigation of the ubiquinone binding site of respiratory Complex II and its inhibitors.
Biochim Biophys Acta Proteins Proteom, 1869, 2021
6MYT
DownloadVisualize
BU of 6myt by Molmil
Avian mitochondrial complex II with Atpenin A5 bound, sidechain in pocket
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, 3-[(2S,4S,5R)-5,6-DICHLORO-2,4-DIMETHYL-1-OXOHEXYL]-4-HYDROXY-5,6-DIMETHOXY-2(1H)-PYRIDINONE, DI(HYDROXYETHYL)ETHER, ...
Authors:Berry, E.A, Huang, L.-S.
Deposit date:2018-11-02
Release date:2019-11-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Crystallographic investigation of the ubiquinone binding site of respiratory Complex II and its inhibitors.
Biochim Biophys Acta Proteins Proteom, 1869, 2021
6MYR
DownloadVisualize
BU of 6myr by Molmil
Avian mitochondrial complex II with thiapronil bound
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, DI(HYDROXYETHYL)ETHER, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Huang, L.-S, Luemmen, P, Berry, E.A.
Deposit date:2018-11-02
Release date:2019-10-16
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystallographic investigation of the ubiquinone binding site of respiratory Complex II and its inhibitors.
Biochim Biophys Acta Proteins Proteom, 1869, 2021
6RAU
DownloadVisualize
BU of 6rau by Molmil
PostS3_Pmar_lig4_WT
Descriptor: ADENOSINE MONOPHOSPHATE, ATP-dependent DNA ligase, DNA (5'-D(*AP*TP*TP*GP*CP*GP*AP*CP*CP*CP*CP*AP*CP*TP*AP*TP*CP*GP*GP*AP*A)-3'), ...
Authors:Leiros, H.K.S, Williamson, A.
Deposit date:2019-04-08
Release date:2019-07-10
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Structural intermediates of a DNA-ligase complex illuminate the role of the catalytic metal ion and mechanism of phosphodiester bond formation.
Nucleic Acids Res., 47, 2019
6MYS
DownloadVisualize
BU of 6mys by Molmil
Avian mitochondrial complex II with Atpenin A5 bound, sidechain outside
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, 3-[(2S,4S,5R)-5,6-DICHLORO-2,4-DIMETHYL-1-OXOHEXYL]-4-HYDROXY-5,6-DIMETHOXY-2(1H)-PYRIDINONE, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Berry, E.A, Huang, L.-S.
Deposit date:2018-11-02
Release date:2019-11-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Crystallographic investigation of the ubiquinone binding site of respiratory Complex II and its inhibitors.
Biochim Biophys Acta Proteins Proteom, 1869, 2021
6MYP
DownloadVisualize
BU of 6myp by Molmil
Avian mitochondrial complex II with TTFA (thenoyltrifluoroacetone) bound
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, 4,4,4-TRIFLUORO-1-THIEN-2-YLBUTANE-1,3-DIONE, BICARBONATE ION, ...
Authors:Berry, E.A, Huang, L.-S.
Deposit date:2018-11-02
Release date:2019-11-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystallographic investigation of the ubiquinone binding site of respiratory Complex II and its inhibitors.
Biochim Biophys Acta Proteins Proteom, 1869, 2021
7WJ5
DownloadVisualize
BU of 7wj5 by Molmil
Cryo-EM structure of human somatostatin receptor 2 complex with its agonist somatostatin delineates the ligand binding specificity
Descriptor: Gai1 antibody (scfv16), Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
Authors:Heo, Y.S, Yoon, E.J, Jeon, Y.E, Yun, J.-H, Ishimoto, N, Woo, H, Park, S.Y, Song, J, Lee, W.T.
Deposit date:2022-01-05
Release date:2022-07-13
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (3.72 Å)
Cite:Cryo-EM structure of the human somatostatin receptor 2 complex with its agonist somatostatin delineates the ligand-binding specificity.
Elife, 11, 2022
6E0A
DownloadVisualize
BU of 6e0a by Molmil
Crystal Structure of Helicobacter pylori TlpA Chemoreceptor Ligand Binding Domain
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, CALCIUM ION, CHLORIDE ION, ...
Authors:Remington, S.J, Guillemin, K, Sweeney, E, Perkins, A.
Deposit date:2018-07-06
Release date:2018-09-12
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Structures of the ligand-binding domain of Helicobacter pylori chemoreceptor TlpA.
Protein Sci., 27, 2018
6MYO
DownloadVisualize
BU of 6myo by Molmil
Avian mitochondrial complex II with flutolanyl bound
Descriptor: 1,2-Distearoyl-sn-glycerophosphoethanolamine, DI(HYDROXYETHYL)ETHER, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Berry, E.A, Huang, L.-S.
Deposit date:2018-11-02
Release date:2019-11-06
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystallographic investigation of the ubiquinone binding site of respiratory Complex II and its inhibitors.
Biochim Biophys Acta Proteins Proteom, 1869, 2021

238582

건을2025-07-09부터공개중

PDB statisticsPDBj update infoContact PDBjnumon