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2FJZ
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Structure of the Alzheimer's Amyloid Precursor Protein (APP) copper binding domain (residues 133 to 189) in 'small unit cell' form, metal-free
Descriptor: Amyloid beta A4 protein precursor
Authors:Kong, G.K.-W, Parker, M.W.
Deposit date:2006-01-03
Release date:2007-01-16
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Structural Studies of the Alzheimer's Amyloid Precursor Protein Copper-binding Domain Reveal How it Binds Copper Ions
J.Mol.Biol., 367, 2007
1XAL
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BU of 1xal by Molmil
CRYSTAL STRUCTURE OF STAPHLYOCOCCUS AUREUS 3-DEHYDROQUINATE SYNTHASE (DHQS) IN COMPLEX WITH ZN2+, NAD+ AND CARBAPHOSPHONATE (SOAK)
Descriptor: 3-dehydroquinate synthase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ZINC ION, ...
Authors:Nichols, C.E, Ren, J, Leslie, K, Dhaliwal, B, Lockyer, M, Charles, I, Hawkins, A.R, Stammers, D.K.
Deposit date:2004-08-26
Release date:2005-03-01
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Comparison of ligand induced conformational changes and domain closure mechanisms, between prokaryotic and eukaryotic dehydroquinate synthases.
J.Mol.Biol., 343, 2004
1VSG
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2.9 ANGSTROMS RESOLUTION STRUCTURE OF THE N-TERMINAL DOMAIN OF A VARIANT SURFACE GLYCOPROTEIN FROM TRYPANOSOMA BRUCEI
Descriptor: VARIANT SURFACE GLYCOPROTEIN MITAT 1.2, alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Freymann, D, Down, J, Wiley, D.C.
Deposit date:1990-10-22
Release date:1992-01-15
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:2.9 A resolution structure of the N-terminal domain of a variant surface glycoprotein from Trypanosoma brucei.
J.Mol.Biol., 216, 1990
2F55
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Two hepatitis c virus ns3 helicase domains complexed with the same strand of dna
Descriptor: 5'-D(P*(DU)P*(DU)P*(DU))-3', 5'-D(P*(DU)P*(DU)P*(DU)P*(DU)P*(DU)P*(DU)P*(DU)P*(DU)P*(DU)P*(DU)P*(DU)P*(DU)P*(DU))-3', SULFATE ION, ...
Authors:Lu, J.Z, Jordan, J.B, Sakon, J.
Deposit date:2005-11-25
Release date:2005-12-06
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structural and biological identification of residues on the surface of NS3 helicase required for optimal replication of the hepatitis C virus
J.Biol.Chem., 281, 2006
1VSO
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Crystal Structure of the Ligand-Binding Core of iGluR5 in Complex With the Antagonist (S)-ATPO at 1.85 A resolution
Descriptor: (S)-2-AMINO-3-(5-TERT-BUTYL-3-(PHOSPHONOMETHOXY)-4-ISOXAZOLYL)PROPIONIC ACID, GLYCEROL, Glutamate receptor, ...
Authors:Hald, H, Naur, P, Gajhede, M, Kastrup, J.S.
Deposit date:2007-03-29
Release date:2007-07-03
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Partial agonism and antagonism of the ionotropic glutamate receptor iGLuR5: structures of the ligand-binding core in complex with domoic acid and 2-amino-3-[5-tert-butyl-3-(phosphonomethoxy)-4-isoxazolyl]propionic acid.
J.Biol.Chem., 282, 2007
1XAG
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BU of 1xag by Molmil
CRYSTAL STRUCTURE OF STAPHLYOCOCCUS AUREUS 3-DEHYDROQUINATE SYNTHASE (DHQS) IN COMPLEX WITH ZN2+, NAD+ AND CARBAPHOSPHONATE
Descriptor: 3-dehydroquinate synthase, CHLORIDE ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Nichols, C.E, Ren, J, Leslie, K, Dhaliwal, B, Lockyer, M, Charles, I, Hawkins, A.R, Stammers, D.K.
Deposit date:2004-08-25
Release date:2005-03-01
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Comparison of ligand induced conformational changes and domain closure mechanisms, between prokaryotic and eukaryotic dehydroquinate synthases.
J.Mol.Biol., 343, 2004
1XDO
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BU of 1xdo by Molmil
Crystal Structure of Escherichia coli Polyphosphate Kinase
Descriptor: Polyphosphate kinase
Authors:Zhu, Y, Huang, W, Lee, S.S, Xu, W.
Deposit date:2004-09-07
Release date:2005-06-21
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of a polyphosphate kinase and its implications for polyphosphate synthesis
Embo Rep., 6, 2005
1X7G
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Actinorhodin Polyketide Ketoreductase, act KR, with NADP bound
Descriptor: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Putative ketoacyl reductase
Authors:Korman, T.P, Hill, J.A, Vu, T.N.
Deposit date:2004-08-13
Release date:2004-12-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural analysis of actinorhodin polyketide ketoreductase: cofactor binding and substrate specificity
Biochemistry, 43, 2004
1XFD
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Structure of a human A-type Potassium Channel Accelerating factor DPPX, a member of the dipeptidyl aminopeptidase family
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Dipeptidyl aminopeptidase-like protein 6, alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Strop, P, Bankovich, A.J, Hansen, K.C, Garcia, K.C, Brunger, A.T.
Deposit date:2004-09-14
Release date:2004-10-26
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of a human A-type potassium channel interacting protein DPPX, a member of the dipeptidyl aminopeptidase family
J.Mol.Biol., 343, 2004
1VXO
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METHYLPHOSPHONYLATED ACETYLCHOLINESTERASE (AGED) OBTAINED BY REACTION WITH O-ETHYL-S-[2-[BIS(1-METHYLETHYL)AMINO]ETHYL] METHYLPHOSPHONOTHIOATE (VX)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, METHYLPHOSPHONIC ACID ESTER GROUP, PROTEIN (ACETYLCHOLINESTERASE)
Authors:Millard, C.B, Silman, I, Sussman, J.L.
Deposit date:1999-04-21
Release date:1999-11-15
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Reaction Products of Acetylcholinesterase and VX Reveal a Mobile Histidine in the Catalytic Triad
J.Am.Chem.Soc., 121, 1999
2EV6
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BU of 2ev6 by Molmil
Bacillus subtilis manganese transport regulator (MNTR) bound to zinc
Descriptor: CITRATE ANION, GLYCEROL, Transcriptional regulator mntR, ...
Authors:Kliegman, J.I, Griner, S.L, Helmann, J.D, Brennan, R.G, Glasfeld, A.
Deposit date:2005-10-31
Release date:2006-03-07
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural Basis for the Metal-Selective Activation of the Manganese Transport Regulator of Bacillus subtilis.
Biochemistry, 45, 2006
1VZU
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BU of 1vzu by Molmil
Roles of active site tryptophans in substrate binding and catalysis by ALPHA-1,3 GALACTOSYLTRANSFERASE
Descriptor: GLYCEROL, MANGANESE (II) ION, N-ACETYLLACTOSAMINIDE ALPHA-1,3-GALACTOSYLTRANSFERASE, ...
Authors:Zhang, Y, Deshpande, A, Xie, Z, Natesh, R, Acharya, K.R, Brew, K.
Deposit date:2004-05-27
Release date:2004-07-08
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Roles of active site tryptophans in substrate binding and catalysis by alpha-1,3 galactosyltransferase.
Glycobiology, 14, 2004
1X79
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Crystal structure of human GGA1 GAT domain complexed with the GAT-binding domain of Rabaptin5
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, ADP-ribosylation factor binding protein GGA1, Rab GTPase binding effector protein 1, ...
Authors:Zhu, G, Zhang, X.C.
Deposit date:2004-08-13
Release date:2004-10-12
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Crystal structure of human GGA1 GAT domain complexed with the GAT-binding domain of Rabaptin5.
EMBO J., 23, 2004
1X7R
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BU of 1x7r by Molmil
CRYSTAL STRUCTURE OF ESTROGEN RECEPTOR ALPHA COMPLEXED WITH GENISTEIN
Descriptor: Estrogen receptor 1 (alpha), GENISTEIN, steroid receptor coactivator-3
Authors:Manas, E.S, Xu, Z.B, Unwalla, R.J, Somers, W.S.
Deposit date:2004-08-16
Release date:2005-03-01
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Understanding the Selectivity of Genistein for Human Estrogen Receptor-Beta Using X-Ray Crystallography and Computational Methods
Structure, 12, 2004
1W0Z
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BU of 1w0z by Molmil
Urokinase type plasminogen activator
Descriptor: N-(BUTYLSULFONYL)-D-SERYL-N-{4-[AMINO(IMINO)METHYL]BENZYL}-L-ALANINAMIDE, SULFATE ION, UROKINASE-TYPE PLASMINOGEN ACTIVATOR
Authors:Jacob, U.
Deposit date:2004-06-15
Release date:2008-05-20
Last modified:2019-09-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystals of urokinase type plasminogen activator complexes reveal the binding mode of peptidomimetic inhibitors.
J.Mol.Biol., 328, 2003
1X8X
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Tyrosyl t-RNA Synthetase from E.coli Complexed with Tyrosine
Descriptor: SULFATE ION, TYROSINE, Tyrosyl-tRNA synthetase
Authors:Kobayashi, T, Takimura, T, Sekine, R, Kelly, V.P, Kamata, K, Sakamoto, K, Nishimura, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-08-19
Release date:2005-01-25
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Snapshots of the KMSKS Loop Rearrangement for Amino Acid Activation by Bacterial Tyrosyl-tRNA Synthetase
J.MOL.BIOL., 346, 2005
1VWF
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BU of 1vwf by Molmil
STREPTAVIDIN COMPLEXED WITH CYCLO-AC-[CHPQGPPC]-NH2 MONOMER, PH 3.67
Descriptor: PEPTIDE LIGAND CONTAINING HPQ, STREPTAVIDIN
Authors:Katz, B.A, Cass, R.T.
Deposit date:1997-03-03
Release date:1998-03-18
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:In crystals of complexes of streptavidin with peptide ligands containing the HPQ sequence the pKa of the peptide histidine is less than 3.0.
J.Biol.Chem., 272, 1997
1VDH
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BU of 1vdh by Molmil
Structure-based functional identification of a novel heme-binding protein from thermus thermophilus HB8
Descriptor: muconolactone isomerase-like protein
Authors:Ebihara, A, Okamoto, A, Kousumi, Y, Yamamoto, H, Masui, R, Ueyama, N, Shibata, T, Inoue, Y, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-03-22
Release date:2004-09-22
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure-based functional identification of a novel heme-binding protein from Thermus thermophilus HB8.
J.STRUCT.FUNCT.GENOM., 6, 2005
1VEP
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BU of 1vep by Molmil
Crystal Structure Analysis of Triple (T47M/Y164E/T328N)/maltose of Bacillus cereus Beta-Amylase at pH 6.5
Descriptor: Beta-amylase, CALCIUM ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, ...
Authors:Hirata, A, Adachi, M, Utsumi, S, Mikami, B.
Deposit date:2004-04-03
Release date:2005-05-24
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Engineering of the pH optimum of Bacillus cereus beta-amylase: conversion of the pH optimum from a bacterial type to a higher-plant type
Biochemistry, 43, 2004
1VTO
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BU of 1vto by Molmil
1.9 A RESOLUTION REFINED STRUCTURE OF TBP RECOGNIZING THE MINOR GROOVE OF TATAAAAG
Descriptor: DNA (5'-D(*GP*CP*TP*AP*TP*AP*AP*AP*AP*GP*GP*GP*CP*A)-3'), DNA (5'-D(*TP*GP*CP*CP*CP*TP*TP*TP*TP*AP*TP*AP*GP*C)-3'), TATA BINDING PROTEIN
Authors:Kim, J.L, Burley, S.K.
Deposit date:1996-09-06
Release date:2011-07-13
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:1.9 A Resolution Refined Structure of TBP Recognizing the Minor Groove of TATAAAAG
Nat.Struct.Biol., 1, 1994
1X7H
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Actinorhodin Polyketide Ketoreductase, with NADPH bound
Descriptor: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Putative ketoacyl reductase
Authors:Korman, T.P, Hill, J.A, Vu, T.N.
Deposit date:2004-08-13
Release date:2004-12-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural analysis of actinorhodin polyketide ketoreductase: cofactor binding and substrate specificity
Biochemistry, 43, 2004
1VZ8
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Ornithine Acetyltransferase (ORF6 Gene Product - Clavulanic Acid Biosynthesis) from Streptomyces clavuligerus (SeMet structure)
Descriptor: ORNITHINE ACETYL-TRANSFERASE, SULFATE ION
Authors:Elkins, J.M, Kershaw, N.J, Schofield, C.J.
Deposit date:2004-05-14
Release date:2004-09-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:X-Ray Crystal Structure of Ornithine Acetyltransferase from the Clavulanic Acid Biosynthesis Gene Cluster.
Biochem.J., 385, 2005
1W01
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Crystal structure of mutant enzyme Y57F/D103L of ketosteroid isomerase from Pseudomonas putida biotype B
Descriptor: STEROID DELTA-ISOMERASE
Authors:Jang, D.S, Choi, K.Y.
Deposit date:2004-05-30
Release date:2004-07-08
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Double-Mutant Cycle Analysis of a Hydrogen Bond Network in Ketosteroid Isomerase from Pseudomonas Putida Biotype B.
Biochem.J., 382, 2004
1W0P
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Vibrio cholerae sialidase with alpha-2,6-sialyllactose
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, GLYCEROL, ...
Authors:Moustafa, I, Connaris, H, Taylor, M, Zaitsev, V, Wilson, J.C, Kiefel, M.J, von-Itzstein, M, Taylor, G.
Deposit date:2004-06-09
Release date:2004-07-08
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Sialic Acid Recognition by Vibrio Cholerae Neuraminidase.
J.Biol.Chem., 279, 2004
1W12
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UROKINASE TYPE PLASMINOGEN ACTIVATOR
Descriptor: N-((1S)-4-{[AMINO(IMINO)METHYL]AMINO}-1-FORMYLBUTYL)-2-{(3R)-3-[(BENZYLSULFONYL)AMINO]-2-OXO-5-PHENYL-2,3-DIHYDRO-1H-1,4-BENZODIAZEPIN-1-YL}ACETAMIDE, UROKINASE-TYPE PLASMINOGEN ACTIVATOR
Authors:Jacob, U.
Deposit date:2004-06-15
Release date:2008-05-20
Last modified:2019-05-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystals of Urokinase Type Plasminogen Activator Complexes Reveal the Binding Mode of Peptidomimetic Inhibitors.
J.Mol.Biol., 328, 2003

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