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2GGH
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BU of 2ggh by Molmil
The mutant A68C-D72C-NLQ of Deinococcus Radiodurans Nacylamino acid racemase
Descriptor: MAGNESIUM ION, N-acylamino acid racemase, N~2~-ACETYL-L-GLUTAMINE
Authors:Wang, W.C, Chiu, W.C.
Deposit date:2006-03-24
Release date:2006-04-11
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure-Stability-Activity Relationship in Covalently Cross-linked N-Carbamoyl d-Amino acid Amidohydrolase and N-Acylamino acid Racemase.
J.Mol.Biol., 359, 2006
2DVN
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BU of 2dvn by Molmil
Structure of PH1917 protein with the complex of IMP from Pyrococcus horikoshii
Descriptor: GLYCEROL, Hypothetical protein PH1917, INOSINIC ACID, ...
Authors:Lokanath, N.K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-07-31
Release date:2007-09-04
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structures of dimeric nonstandard nucleotide triphosphate pyrophosphatase from Pyrococcus horikoshii OT3: functional significance of interprotomer conformational changes
J.Mol.Biol., 375, 2008
2GRH
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BU of 2grh by Molmil
M37V mutant of Scapharca dimeric hemoglobin, with CO bound
Descriptor: CARBON MONOXIDE, Globin-1, PROTOPORPHYRIN IX CONTAINING FE
Authors:Knapp, J.E, Pahl, R, Srajer, V, Royer Jr, W.E.
Deposit date:2006-04-24
Release date:2006-05-09
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Allosteric action in real time: Time-resolved crystallographic studies of a cooperative dimeric hemoglobin.
Proc.Natl.Acad.Sci.Usa, 103, 2006
3V4P
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BU of 3v4p by Molmil
crystal structure of a4b7 headpiece complexed with Fab ACT-1
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Yu, Y, Zhu, J, Springer, T.A.
Deposit date:2011-12-15
Release date:2012-01-11
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Structural specializations of a4b7, an Integrin that Mediates Rolling Adhesion
J.Cell Biol., 196, 2012
1S2W
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BU of 1s2w by Molmil
Crystal structure of phosphoenolpyruvate mutase in high ionic strength
Descriptor: Phosphoenolpyruvate phosphomutase, SULFATE ION
Authors:Liu, S, Lu, Z, Han, Y, Jia, Y, Howard, A, Dunaway-Mariano, D, Herzberg, O.
Deposit date:2004-01-11
Release date:2004-05-04
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Conformational Flexibility of PEP Mutase
Biochemistry, 43, 2004
5DAA
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BU of 5daa by Molmil
E177K MUTANT OF D-AMINO ACID AMINOTRANSFERASE COMPLEXED WITH PYRIDOXAMINE-5'-PHOSPHATE
Descriptor: D-AMINO ACID AMINOTRANSFERASE, PYRIDOXAL-5'-PHOSPHATE
Authors:Peisach, D, Ringe, D.
Deposit date:1998-12-13
Release date:1998-12-14
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Effects of the E177K mutation in D-amino acid transaminase. Studies on an essential coenzyme anchoring group that contributes to stereochemical fidelity.
Biochemistry, 38, 1999
5DFP
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BU of 5dfp by Molmil
Crystal structure of PAK1 in complex with an inhibitor compound FRAX1036
Descriptor: 6-[2-chloro-4-(6-methylpyrazin-2-yl)phenyl]-8-ethyl-2-{[2-(1-methylpiperidin-4-yl)ethyl]amino}pyrido[2,3-d]pyrimidin-7(8H)-one, DIMETHYL SULFOXIDE, Serine/threonine-protein kinase PAK 1
Authors:Maksimoska, J, Marmorstein, R, Wang, W.
Deposit date:2015-08-27
Release date:2016-01-27
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Design of Selective PAK1 Inhibitor G-5555: Improving Properties by Employing an Unorthodox Low-pK a Polar Moiety.
Acs Med.Chem.Lett., 6, 2015
1S2T
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BU of 1s2t by Molmil
Crystal Structure Of Apo Phosphoenolpyruvate Mutase
Descriptor: Phosphoenolpyruvate phosphomutase
Authors:Liu, S, Lu, Z, Han, Y, Jia, Y, Howard, A, Dunaway-Mariano, D, Herzberg, O.
Deposit date:2004-01-11
Release date:2004-05-04
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Conformational Flexibility of PEP Mutase
Biochemistry, 43, 2004
1OZM
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BU of 1ozm by Molmil
Y106F mutant of Z. mobilis TGT
Descriptor: Queuine tRNA-ribosyltransferase, ZINC ION
Authors:Brenk, R, Stubbs, M.T, Heine, A, Reuter, K, Klebe, G.
Deposit date:2003-04-09
Release date:2003-09-30
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Flexible adaptations in the structure of the tRNA-modifying enzyme tRNA-guanine transglycosylase and their implications for substrate selectivity, reaction mechanism and structure-based drug design
Chembiochem, 4, 2003
5E40
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BU of 5e40 by Molmil
3-Deoxy-D-arabino-heptulosonate 7-phosphate synthase from Mycobacterium tuberculosis with D-tyrosine bound in the phenylalanine binding site
Descriptor: 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase, D-TYROSINE, GLYCEROL, ...
Authors:Reichau, S, Jiao, W, Parker, E.J.
Deposit date:2015-10-05
Release date:2016-06-01
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Probing the Sophisticated Synergistic Allosteric Regulation of Aromatic Amino Acid Biosynthesis in Mycobacterium tuberculosis Using -Amino Acids.
Plos One, 11, 2016
1P0E
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BU of 1p0e by Molmil
CRYSTAL STRUCTURE OF ZYMOMONAS MOBILIS tRNA-GUANINE TRANSGLYCOSYLASE (TGT) COCRYSTALLISED WITH PREQ1 AT PH 5.5
Descriptor: 7-DEAZA-7-AMINOMETHYL-GUANINE, Queuine tRNA-ribosyltransferase, ZINC ION
Authors:Brenk, R, Stubbs, M.T, Heine, A, Reuter, K, Klebe, G.
Deposit date:2003-04-10
Release date:2003-09-30
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Flexible adaptations in the structure of the tRNA-modifying enzyme tRNA-guanine transglycosylase and their implications for substrate selectivity, reaction mechanism and structure-based drug design
Chembiochem, 4, 2003
4OK5
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BU of 4ok5 by Molmil
Crystal Structure of Hepatitis C Virus NS3 Helicase Inhibitor Co-complex with Compound 9 [1-(3-ethynylbenzyl)-1H-indol-3-yl]acetic acid]
Descriptor: CALCIUM ION, Serine protease NS3, [1-(3-ethynylbenzyl)-1H-indol-3-yl]acetic acid
Authors:Padyana, A.K.
Deposit date:2014-01-21
Release date:2014-03-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Integrated strategies for identifying leads that target the NS3 helicase of the hepatitis C virus.
J.Med.Chem., 57, 2014
3DHX
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BU of 3dhx by Molmil
Crystal structure of isolated C2 domain of the methionine uptake transporter
Descriptor: IODIDE ION, Methionine import ATP-binding protein metN
Authors:Johnson, E, Kaiser, J.T, Lee, A.T, Rees, D.C.
Deposit date:2008-06-18
Release date:2008-08-05
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The high-affinity E. coli methionine ABC transporter: structure and allosteric regulation.
Science, 321, 2008
5DQJ
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BU of 5dqj by Molmil
Structure of unliganded S55-5 Fab
Descriptor: S55-5 Fab (IgG1 kappa) light chain, S55-5 Fab (IgG1) heavy chain
Authors:Haji-Ghassemi, O, Evans, S.V.
Deposit date:2015-09-14
Release date:2016-03-09
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Lipid A-antibody structures reveal a widely-utilized pocket specific for negatively charged groups derived from unrelated V-genes
J.Biol.Chem., 2015
2YB7
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BU of 2yb7 by Molmil
CBM62 in complex with 6-alpha-D-Galactosyl-mannotriose
Descriptor: CALCIUM ION, CARBOHYDRATE BINDING FAMILY 6, GLYCEROL, ...
Authors:Montanier, C.Y, Correia, M.A.S, Flint, J.E, Zhu, Y, McKee, L.S, Prates, J.A.M, Polizzi, S.J, Coutinho, P.M, Henrissat, B, Fontes, C.M.G.A, Gilbert, H.J.
Deposit date:2011-03-02
Release date:2011-08-17
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A Novel, Noncatalytic Carbohydrate-Binding Module Displays Specificity for Galactose-Containing Polysaccharides Through Calcium-Mediated Oligomerization.
J.Biol.Chem., 286, 2011
1S2U
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BU of 1s2u by Molmil
Crystal structure of the D58A phosphoenolpyruvate mutase mutant protein
Descriptor: DI(HYDROXYETHYL)ETHER, Phosphoenolpyruvate phosphomutase
Authors:Liu, S, Lu, Z, Han, Y, Jia, Y, Howard, A, Dunaway-Mariano, D, Herzberg, O.
Deposit date:2004-01-11
Release date:2004-05-04
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Conformational Flexibility of PEP Mutase
Biochemistry, 43, 2004
8RQA
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BU of 8rqa by Molmil
Crystal structure of CRBN-midi in complex with Lenalidomide
Descriptor: Protein cereblon, S-Lenalidomide, ZINC ION
Authors:Rutter, Z.J, Kroupova, A, Zollman, D, Ciulli, A.
Deposit date:2024-01-17
Release date:2024-09-25
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Design of a Cereblon construct for crystallographic and biophysical studies of protein degraders.
Nat Commun, 15, 2024
6CYR
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BU of 6cyr by Molmil
Crystal structure of the UBE2A variant Q93E
Descriptor: Ubiquitin-conjugating enzyme E2 A
Authors:Ranzani, A.T, de Oliveira, J.F.
Deposit date:2018-04-06
Release date:2018-12-12
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Mechanistic insights revealed by a UBE2A mutation linked to intellectual disability.
Nat. Chem. Biol., 15, 2019
8RQ9
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BU of 8rq9 by Molmil
Crystal structure of PROTAC CFT-1297 in complex with CRBN-midi and BRD4(BD2)
Descriptor: (3~{S})-3-[7-[1-[7-[4-[6-(4-chlorophenyl)-1-methyl-spiro[[1,2,4]triazolo[4,3-a][1,4]benzodiazepine-4,1'-cyclopropane]-8-yl]pyrazol-1-yl]heptyl]piperidin-4-yl]-3-oxidanylidene-1~{H}-isoindol-2-yl]piperidine-2,6-dione, Bromodomain-containing protein 4, Protein cereblon, ...
Authors:Darren, D, Ramachandran, S, Kroupova, A, Zollman, D, Ciulli, A.
Deposit date:2024-01-17
Release date:2024-09-25
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.91 Å)
Cite:Design of a Cereblon construct for crystallographic and biophysical studies of protein degraders.
Nat Commun, 15, 2024
8RQ1
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BU of 8rq1 by Molmil
Crystal structure of CRBN-midi
Descriptor: Protein cereblon, ZINC ION
Authors:Kroupova, A, Zollman, D, Ciulli, A.
Deposit date:2024-01-17
Release date:2024-09-25
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.11 Å)
Cite:Design of a Cereblon construct for crystallographic and biophysical studies of protein degraders.
Nat Commun, 15, 2024
8RQC
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BU of 8rqc by Molmil
Crystal structure of CRBN-midi in complex with mezigdomide and IKZF1 ZF2
Descriptor: DNA-binding protein Ikaros, Mezigdomide, Protein cereblon, ...
Authors:Furihata, H, Kroupova, A, Zollman, D, Ciulli, A.
Deposit date:2024-01-17
Release date:2024-09-25
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Design of a Cereblon construct for crystallographic and biophysical studies of protein degraders.
Nat Commun, 15, 2024
8RQ8
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BU of 8rq8 by Molmil
Crystal structure of CRBN-midi in complex with mezigdomide
Descriptor: Mezigdomide, Protein cereblon, ZINC ION
Authors:Zollman, D, Kroupova, A, Pethe, J, Ciulli, A.
Deposit date:2024-01-17
Release date:2024-09-25
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Design of a Cereblon construct for crystallographic and biophysical studies of protein degraders.
Nat Commun, 15, 2024
4OJQ
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BU of 4ojq by Molmil
Crystal Structure of Hepatitis C Virus NS3 Helicase Inhibitor Co-complex with Fragment 1 [(5-bromo-1H-indol-3-yl)acetic acid]
Descriptor: (5-bromo-1H-indol-3-yl)acetic acid, CALCIUM ION, Serine protease NS3
Authors:Padyana, A.K.
Deposit date:2014-01-21
Release date:2014-03-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Integrated strategies for identifying leads that target the NS3 helicase of the hepatitis C virus.
J.Med.Chem., 57, 2014
5KNN
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BU of 5knn by Molmil
Evolutionary gain of alanine mischarging to non-cognate tRNAs with a G4:U69 base pair
Descriptor: '5'-O-(N-(L-ALANYL)-SULFAMOYL)ADENOSINE, Alanine--tRNA ligase, cytoplasmic
Authors:Sun, L, He, W, Yang, X.-L.
Deposit date:2016-06-28
Release date:2016-09-28
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Evolutionary Gain of Alanine Mischarging to Noncognate tRNAs with a G4:U69 Base Pair.
J.Am.Chem.Soc., 138, 2016
5DMU
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BU of 5dmu by Molmil
Structure of the NHEJ polymerase from Methanocella paludicola
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, NHEJ Polymerase, ...
Authors:Brissett, N.C, Bartlett, E.J, Doherty, A.J.
Deposit date:2015-09-09
Release date:2015-10-07
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.949 Å)
Cite:Molecular basis for DNA strand displacement by NHEJ repair polymerases.
Nucleic Acids Res., 44, 2016

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