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7KG1
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BU of 7kg1 by Molmil
Structure of human PARG complexed with PARG-002
Descriptor: 1,3-dimethyl-8-{[2-(morpholin-4-yl)ethyl]amino}-3,7-dihydro-1H-purine-2,6-dione, CACODYLATE ION, DIMETHYL SULFOXIDE, ...
Authors:Brosey, C.A, Balapiti-Modarage, L.P.F, Warden, L.S, Jones, D.E, Ahmed, Z, Tainer, J.A.
Deposit date:2020-10-15
Release date:2021-03-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Targeting SARS-CoV-2 Nsp3 macrodomain structure with insights from human poly(ADP-ribose) glycohydrolase (PARG) structures with inhibitors.
Prog.Biophys.Mol.Biol., 163, 2021
7KG7
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BU of 7kg7 by Molmil
Structure of human PARG complexed with PARG-292
Descriptor: 8-{[2-(1,1-dioxo-1lambda~6~,4-thiazinan-4-yl)ethyl]sulfanyl}-1,3-dimethyl-3,7-dihydro-1H-purine-2,6-dione, DIMETHYL SULFOXIDE, Poly(ADP-ribose) glycohydrolase, ...
Authors:Brosey, C.A, Balapiti-Modarage, L.P.F, Warden, L.S, Jones, D.E, Ahmed, Z, Tainer, J.A.
Deposit date:2020-10-16
Release date:2021-03-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Targeting SARS-CoV-2 Nsp3 macrodomain structure with insights from human poly(ADP-ribose) glycohydrolase (PARG) structures with inhibitors.
Prog.Biophys.Mol.Biol., 163, 2021
7KFP
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BU of 7kfp by Molmil
Structure of human PARG complexed with PARG-119
Descriptor: DIMETHYL SULFOXIDE, GLYCEROL, N-{[2-(1,3-dimethyl-2-oxo-6-sulfanylidene-1,2,3,6-tetrahydro-7H-purin-7-yl)ethyl]carbamoyl}methanesulfonamide, ...
Authors:Brosey, C.A, Bommagani, S, Warden, L.S, Jones, D.E, Ahmed, Z, Tainer, J.A.
Deposit date:2020-10-14
Release date:2021-03-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Targeting SARS-CoV-2 Nsp3 macrodomain structure with insights from human poly(ADP-ribose) glycohydrolase (PARG) structures with inhibitors.
Prog.Biophys.Mol.Biol., 163, 2021
7KG0
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BU of 7kg0 by Molmil
Structure of human PARG complexed with PARG-131
Descriptor: 1,2-ETHANEDIOL, 5-({4-[(1,3-dimethyl-2,6-dioxo-1,2,3,6-tetrahydro-7H-purin-7-yl)methyl]phenyl}methyl)pyrimidine-2,4,6(1H,3H,5H)-trione, Poly(ADP-ribose) glycohydrolase, ...
Authors:Arvai, A, Bommagani, S, Brosey, C.A, Jones, D.E, Warden, L.S, Ahmed, Z, Tainer, J.A.
Deposit date:2020-10-15
Release date:2021-03-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Targeting SARS-CoV-2 Nsp3 macrodomain structure with insights from human poly(ADP-ribose) glycohydrolase (PARG) structures with inhibitors.
Prog.Biophys.Mol.Biol., 163, 2021
7KG6
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BU of 7kg6 by Molmil
Structure of human PARG complexed with PARG-322
Descriptor: 1-{2-[(1,3-dimethyl-2,6-dioxo-2,3,6,7-tetrahydro-1H-purin-8-yl)sulfanyl]ethyl}piperidine-4-carboxylic acid, Poly(ADP-ribose) glycohydrolase
Authors:Brosey, C.A, Balapiti-Modarage, L.P.F, Warden, L.S, Jones, D.E, Ahmed, Z, Tainer, J.A.
Deposit date:2020-10-16
Release date:2021-03-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Targeting SARS-CoV-2 Nsp3 macrodomain structure with insights from human poly(ADP-ribose) glycohydrolase (PARG) structures with inhibitors.
Prog.Biophys.Mol.Biol., 163, 2021
7KG8
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BU of 7kg8 by Molmil
Structure of human PARG complexed with PARG-061
Descriptor: 1,3-dimethyl-8-{[2-(morpholin-4-yl)-2-oxoethyl]sulfanyl}-6-sulfanylidene-1,3,6,7-tetrahydro-2H-purin-2-one, CACODYLATE ION, DIMETHYL SULFOXIDE, ...
Authors:Brosey, C.A, Balapiti-Modarage, L.P.F, Warden, L.S, Jones, D.E, Ahmed, Z, Tainer, J.A.
Deposit date:2020-10-16
Release date:2021-03-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Targeting SARS-CoV-2 Nsp3 macrodomain structure with insights from human poly(ADP-ribose) glycohydrolase (PARG) structures with inhibitors.
Prog.Biophys.Mol.Biol., 163, 2021
8WA4
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BU of 8wa4 by Molmil
Solution structure of free ATF4 promoter G-quadruplex
Descriptor: 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE, DNA G-quadruplex, THYMIDINE
Authors:Liu, Y.S, Wang, K.B.
Deposit date:2023-09-07
Release date:2024-09-11
Method:SOLUTION NMR
Cite:Stabilizing ATF4 promoter G-quadruplex overcomes the resistance of glutamine-restricted cancer therapy
To Be Published
5YC4
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BU of 5yc4 by Molmil
Crystal structure of AL3 PHD finger bound to H3K4me3
Descriptor: Histone H3K4me3, PHD finger protein ALFIN-LIKE 3, ZINC ION
Authors:Zhao, S, Zhang, B, Li, H.
Deposit date:2017-09-06
Release date:2018-01-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.697 Å)
Cite:Systematic Profiling of Histone Readers in Arabidopsis thaliana.
Cell Rep, 22, 2018
6TO5
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BU of 6to5 by Molmil
Crystal structure of the oligomerisation domain of the transcription factor PHOSPHATE STARVATION RESPONSE 1 from Arabidopsis.
Descriptor: MAGNESIUM ION, Protein PHOSPHATE STARVATION RESPONSE 1
Authors:Hothorn, M.
Deposit date:2019-12-11
Release date:2021-01-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Inositol pyrophosphates promote the interaction of SPX domains with the coiled-coil motif of PHR transcription factors to regulate plant phosphate homeostasis.
Nat Commun, 12, 2021
6TOC
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BU of 6toc by Molmil
Crystal structure of the oligomerisation domain of the transcription factor PHOSPHATE STARVATION RESPONSE 1 from Arabidopsis (crystal form 3).
Descriptor: Protein PHOSPHATE STARVATION RESPONSE 1
Authors:Hothorn, M.
Deposit date:2019-12-11
Release date:2021-01-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.853 Å)
Cite:Inositol pyrophosphates promote the interaction of SPX domains with the coiled-coil motif of PHR transcription factors to regulate plant phosphate homeostasis.
Nat Commun, 12, 2021
5YC3
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BU of 5yc3 by Molmil
Crystal structure of AL3 PHD finger bound to H3K4me2
Descriptor: H3K4me2, PHD finger protein ALFIN-LIKE 3, ZINC ION
Authors:Zhao, S, Zhang, B, Li, H.
Deposit date:2017-09-06
Release date:2018-01-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.601 Å)
Cite:Systematic Profiling of Histone Readers in Arabidopsis thaliana.
Cell Rep, 22, 2018
6D0Y
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BU of 6d0y by Molmil
X-ray Crystal Structure of PGC-1beta C-terminus bound to the CBP80-CBP20 Cap Binding Complex
Descriptor: MAGNESIUM ION, Nuclear cap-binding protein subunit 1, Nuclear cap-binding protein subunit 2, ...
Authors:Gleghorn, M.L, Maquat, L.E.
Deposit date:2018-04-11
Release date:2018-04-25
Last modified:2020-01-01
Method:X-RAY DIFFRACTION (2.676 Å)
Cite:Transcriptional coactivator PGC-1 alpha contains a novel CBP80-binding motif that orchestrates efficient target gene expression.
Genes Dev., 32, 2018
1YS7
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BU of 1ys7 by Molmil
Crystal structure of the response regulator protein prrA complexed with Mg2+
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, GLYCEROL, ...
Authors:Nowak, E, Panjikar, S, Tucker, P, Mycobacterium Tuberculosis Structural Proteomics Project (XMTB)
Deposit date:2005-02-07
Release date:2006-02-07
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:The structural basis of signal transduction for the response regulator PrrA from Mycobacterium tuberculosis.
J.Biol.Chem., 281, 2006
5YIG
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BU of 5yig by Molmil
Crystal structure of Streptococcus pneumonia ParE with inhibitor
Descriptor: 1-ethyl-3-[5-[2-[(1S,5R)-3-methyl-3,8-diazabicyclo[3.2.1]octan-8-yl]-5-(2-oxidanylidene-3H-1,3,4-oxadiazol-5-yl)pyridin-3-yl]-4-[4-(trifluoromethyl)-1,3-thiazol-2-yl]pyridin-2-yl]urea, DNA topoisomerase 4 subunit B
Authors:Cherian, J, Tan, Y, Hill, J.
Deposit date:2017-10-04
Release date:2018-09-05
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Discovery of dual GyrB/ParE inhibitors active against Gram-negative bacteria.
Eur J Med Chem, 157, 2018
1S6Q
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BU of 1s6q by Molmil
CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE (RT) IN COMPLEX WITH JANSSEN-R147681
Descriptor: 4-[4-(2,4,6-TRIMETHYL-PHENYLAMINO)-PYRIMIDIN-2-YLAMINO]-BENZONITRILE, POL polyprotein [Contains: Reverse transcriptase]
Authors:Das, K, Arnold, E.
Deposit date:2004-01-26
Release date:2004-05-11
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3 Å)
Cite:Roles of Conformational and Positional Adaptability in Structure-Based Design of TMC125-R165335 (Etravirine) and Related Non-nucleoside Reverse Transcriptase Inhibitors That Are Highly Potent and Effective against Wild-Type and Drug-Resistant HIV-1 Variants.
J.Med.Chem., 47, 2004
4N1T
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BU of 4n1t by Molmil
Structure of human MTH1 in complex with TH287
Descriptor: 6-(2,3-dichlorophenyl)-N~4~-methylpyrimidine-2,4-diamine, 7,8-dihydro-8-oxoguanine triphosphatase, SULFATE ION
Authors:Berntsson, R.P.-A, Jemth, A, Gustafsson, R, Svensson, L.M, Helleday, T, Stenmark, P.
Deposit date:2013-10-04
Release date:2014-04-16
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:MTH1 inhibition eradicates cancer by preventing sanitation of the dNTP pool.
Nature, 508, 2014
7ZH3
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BU of 7zh3 by Molmil
USP1 bound to ubiquitin conjugated to FANCD2 (focused refinement)
Descriptor: Ubiquitin carboxyl-terminal hydrolase 1, Ubiquitin-60S ribosomal protein L40, ZINC ION
Authors:Rennie, M.L, Walden, H.
Deposit date:2022-04-05
Release date:2022-10-12
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Cryo-EM reveals a mechanism of USP1 inhibition through a cryptic binding site.
Sci Adv, 8, 2022
6JNY
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BU of 6jny by Molmil
Crystal structure of bacteriophage 21 Q protein
Descriptor: Antiterminator Q protein
Authors:Feng, Y, Shi, J.
Deposit date:2019-03-18
Release date:2019-06-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.451 Å)
Cite:Structural basis of Q-dependent transcription antitermination.
Nat Commun, 10, 2019
3QIP
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BU of 3qip by Molmil
Structure of HIV-1 reverse transcriptase in complex with an RNase H inhibitor and nevirapine
Descriptor: 11-CYCLOPROPYL-5,11-DIHYDRO-4-METHYL-6H-DIPYRIDO[3,2-B:2',3'-E][1,4]DIAZEPIN-6-ONE, 5,6-dihydroxy-2-[(2-phenyl-1H-indol-3-yl)methyl]pyrimidine-4-carboxylic acid, CHLORIDE ION, ...
Authors:Lansdon, E.B, Kirschberg, T.A.
Deposit date:2011-01-27
Release date:2011-04-20
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.0926 Å)
Cite:Structural and Binding Analysis of Pyrimidinol Carboxylic Acid and N-Hydroxy Quinazolinedione HIV-1 RNase H Inhibitors.
Antimicrob.Agents Chemother., 55, 2011
4NR3
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BU of 4nr3 by Molmil
Crystal Structure of a human Mms2/Ubc13 L121G mutant
Descriptor: Ubiquitin-conjugating enzyme E2 N, Ubiquitin-conjugating enzyme E2 variant 2
Authors:Hodge, C.D, Edwards, R.A, Glover, J.N.M.
Deposit date:2013-11-26
Release date:2014-12-10
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.802 Å)
Cite:Stochastic gate dynamics regulate the catalytic activity of ubiquitination enzymes.
J.Am.Chem.Soc., 136, 2014
8PQ5
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BU of 8pq5 by Molmil
Human Cohesin ATPase module with an open DNA exit gate
Descriptor: 64-kDa C-terminal product, ADENOSINE-5'-TRIPHOSPHATE, Structural maintenance of chromosomes protein 1A, ...
Authors:Landwerlin, P, Durand, A, Diebold-Durand, M.-L, Romier, C.
Deposit date:2023-07-10
Release date:2024-09-11
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Conformational dynamics of the human Cohesin ATPase module
To Be Published
7WLP
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BU of 7wlp by Molmil
Epstein-Barr virus protein BKRF4 restricts nucleosome assembly to suppress host antiviral responses
Descriptor: Histone H2B type 1-O,Histone H2A type 1-D, Tegument protein BKRF4
Authors:Chen, J, Shan, S, Zhou, Z.
Deposit date:2022-01-13
Release date:2022-11-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Epstein-Barr virus protein BKRF4 restricts nucleosome assembly to suppress host antiviral responses.
Proc.Natl.Acad.Sci.USA, 119, 2022
6TJU
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BU of 6tju by Molmil
X-ray structure of C-terminal domain of human T-cell lymphotropic virus type 1 (HTLV-1)
Descriptor: Pol protein
Authors:Barski, M, Maertens, G.N.
Deposit date:2019-11-26
Release date:2020-10-21
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Cryo-EM structure of the deltaretroviral intasome in complex with the PP2A regulatory subunit B56 gamma.
Nat Commun, 11, 2020
8Q3Z
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BU of 8q3z by Molmil
Crystal structure of cA4-bound Can2 from Thermoanaerobacter brockii
Descriptor: Cyclic tetraadenosine monophosphate (cA4), DUF1887 family protein, MANGANESE (II) ION
Authors:Jungfer, K, Sigg, A, Jinek, M.
Deposit date:2023-08-04
Release date:2023-11-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Substrate selectivity and catalytic activation of the type III CRISPR ancillary nuclease Can2.
Nucleic Acids Res., 52, 2024
8Q3Y
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BU of 8q3y by Molmil
Crystal structure of apo Can2 from Thermoanaerobacter brockii
Descriptor: DUF1887 family protein
Authors:Jungfer, K, Sigg, A, Jinek, M.
Deposit date:2023-08-04
Release date:2023-11-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Substrate selectivity and catalytic activation of the type III CRISPR ancillary nuclease Can2.
Nucleic Acids Res., 52, 2024

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